MYB83 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_13s0064g00960 T282027_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.758 0.924
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.758 0.924
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.745 0.911
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.745 0.911
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.745 0.911
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_13s0064g00960.t01 Myb 3 36
VIT_13s0064g00960.t01 Myb 42 87

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm012272 Prunus mume Pm012272 I 0.849
LjSGA_026563.1 Lotus japonicus LjSGA_026563.1 I 0.837
OB12G21380 Oryza brachyantha OB12G21380 I 0.817
GSMUA_AchrUn_randomG21080_001 Musa acuminata GSMUA_AchrUn_randomG21080_001 I 0.816
Solyc01g087130.2 Solanum lycopersicum Solyc01g087130.2 I 0.803
evm.TU.supercontig_84.59 Carica papaya evm.TU.supercontig_84.59 I 0.793
Eucgr.B03684 Eucalyptus grandis Eucgr.B03684 I 0.793
TCM_005885 Theobroma cacao TCM_005885 I 0.793
Gorai.001G138800 Gossypium raimondii Gorai.001G138800 I 0.790
Gorai.013G251100 Gossypium raimondii Gorai.013G251100 I 0.790
AMTR_s00022p00252530 Amborella trichopoda AMTR_s00022p00252530 I 0.786
POPTR_0001s27430 Populus trichocarpa POPTR_0001s27430 I 0.783
PK14287.1 Cannabis sativa PK14287.1 I 0.783
Ciclev10033941m.g Citrus clementina Ciclev10033941m.g I 0.783
POPTR_0009s06630 Populus trichocarpa POPTR_0009s06630 I 0.783
GSMUA_Achr8G31350_001 Musa acuminata GSMUA_Achr8G31350_001 I 0.783
SapurV1A.0027s0350 Salix purpurea SapurV1A.0027s0350 I 0.783
GLYMA13G07020 Glycine max GLYMA13G07020 I 0.783
orange1.1g019619m.g Citrus sinensis orange1.1g019619m.g I 0.783
cassava32908.m1 Manihot esculenta cassava32908.m1 I 0.779
Eucgr.G03385 Eucalyptus grandis Eucgr.G03385 I 0.779
Gorai.004G037300 Gossypium raimondii Gorai.004G037300 I 0.773
PGSC0003DMG400006868 Solanum tuberosum PGSC0003DMG400006868 I 0.773
Sb08g016620 Sorghum bicolor Sb08g016620 I 0.772
GRMZM2G052606 Zea mays GRMZM2G052606 I 0.772
Pavir.Ca02370 Panicum virgatum Pavir.Ca02370 I 0.772
GLYMA12G36630 Glycine max GLYMA12G36630 I 0.770
PDK_20s1844641g001 Phoenix dactylifera PDK_20s1844641g001 I 0.768
mgf024753m Mimulus guttatus mgf024753m I 0.768
Bo2g010970 Brassica oleracea Bo2g010970 I 0.767
Thhalv10015560m.g Eutrema salsugineum Thhalv10015560m.g I 0.767
Bo3g008870 Brassica oleracea Bo3g008870 I 0.767
Bra006166 Brassica rapa Bra006166 I 0.767
cassava39861.m1 Manihot esculenta cassava39861.m1 I 0.765
ORGLA12G0120900 Oryza glaberrima ORGLA12G0120900 I 0.763
ORUFI12G15040 Oryza rufipogon ORUFI12G15040 I 0.763
Ciclev10017658m.g Citrus clementina Ciclev10017658m.g I 0.763
OPUNC12G12380 Oryza punctata OPUNC12G12380 I 0.763
ONIVA05G29400 Oryza nivara ONIVA05G29400 I 0.763
OBART12G13720 Oryza barthii OBART12G13720 I 0.763
OGLUM12G15400 Oryza glumaepatula OGLUM12G15400 I 0.763
OMERI12G09660 Oryza meridionalis OMERI12G09660 I 0.763
Aquca_014_00829 Aquilegia coerulea Aquca_014_00829 I 0.763
Traes_5BS_2CB91C54A Triticum aestivum Traes_5BS_2CB91C54A I 0.763
TRIUR3_33254 Triticum urartu TRIUR3_33254 I 0.763
orange1.1g021164m.g Citrus sinensis orange1.1g021164m.g I 0.763
Traes_5DS_AACA2EBA3 Triticum aestivum Traes_5DS_AACA2EBA3 I 0.763
VIT_06s0004g02110 Vitis vinifera VIT_06s0004g02110 I 0.763
PRUPE_ppa009566mg Prunus persica PRUPE_ppa009566mg I 0.763
MDP0000204495 Malus domestica MDP0000204495 I 0.763
cassava30676.valid.m1 Manihot esculenta cassava30676.valid.m1 I 0.763
MDP0000722954 Malus domestica MDP0000722954 I 0.763
Si024786m.g Setaria italica Si024786m.g I 0.763
BGIOSGA036092 Oryza indica BGIOSGA036092 I 0.763
MLOC_66577 Hordeum vulgare MLOC_66577 I 0.763
F775_06561 Aegilops tauschii F775_06561 I 0.763
GSMUA_Achr2G07780_001 Musa acuminata GSMUA_Achr2G07780_001 I 0.762
GLYMA13G27310 Glycine max GLYMA13G27310 I 0.761
Gorai.004G172700 Gossypium raimondii Gorai.004G172700 I 0.761
MTR_3g028740 Medicago truncatula MTR_3g028740 I 0.761
Carubv10001573m.g Capsella rubella Carubv10001573m.g I 0.758
MYB46 Arabidopsis thaliana AT5G12870 D 0.758
GLYMA19G05080 Glycine max GLYMA19G05080 I 0.758
Cagra.1535s0018 Capsella grandiflora Cagra.1535s0018 I 0.758
Bostr.2902s0023 Boechera stricta Bostr.2902s0023 I 0.758
Bra008875 Brassica rapa Bra008875 I 0.758
ATMYB46 Arabidopsis lyrata scaffold_601291.1 I 0.758
PGSC0003DMG400007360 Solanum tuberosum PGSC0003DMG400007360 I 0.758
MDP0000736994 Malus domestica MDP0000736994 I 0.758
Bo9g169270 Brassica oleracea Bo9g169270 I 0.758
Solyc11g065840.1 Solanum lycopersicum Solyc11g065840.1 I 0.758
BRADI4G06317 Brachypodium distachyon BRADI4G06317 I 0.757
Pm016295 Prunus mume Pm016295 I 0.755
PRUPE_ppa016923mg Prunus persica PRUPE_ppa016923mg I 0.755
cassava5203.m1 Manihot esculenta cassava5203.m1 I 0.754
Cla008683 Citrullus lanatus Cla008683 I 0.754
Cucsa.065530 Cucumis sativus Cucsa.065530 I 0.754
PK13930.1 Cannabis sativa PK13930.1 I 0.753
Lus10031281.g Linum usitatissimum Lus10031281.g I 0.750
MTR_2g097910 Medicago truncatula MTR_2g097910 I 0.749
Traes_3DL_46F83C41D Triticum aestivum Traes_3DL_46F83C41D N 0.748
evm.TU.supercontig_640.1 Carica papaya evm.TU.supercontig_640.1 I 0.747
GLYMA12G06180 Glycine max GLYMA12G06180 I 0.746
Cla017541 Citrullus lanatus Cla017541 I 0.745
MYB83 Arabidopsis lyrata fgenesh2_kg.3__848__AT3G08500.1 I 0.745
Bra029696 Brassica rapa Bra029696 I 0.745
Thhalv10021052m.g Eutrema salsugineum Thhalv10021052m.g I 0.745
MYB83 Arabidopsis thaliana AT3G08500 D 0.745
Bo5g139830 Brassica oleracea Bo5g139830 I 0.745
Gorai.006G129100 Gossypium raimondii Gorai.006G129100 I 0.745
Carubv10014093m.g Capsella rubella Carubv10014093m.g I 0.745
Cagra.2991s0041 Capsella grandiflora Cagra.2991s0041 I 0.745
Cucsa.195180 Cucumis sativus Cucsa.195180 I 0.745
Bo3g061630 Brassica oleracea Bo3g061630 I 0.743
TCM_040694 Theobroma cacao TCM_040694 I 0.742
Bostr.22252s0219 Boechera stricta Bostr.22252s0219 I 0.741
GLYMA13G41470 Glycine max GLYMA13G41470 I 0.741
GLYMA15G03920 Glycine max GLYMA15G03920 I 0.741
GLYMA11G14200 Glycine max GLYMA11G14200 I 0.738
MTR_4g065017 Medicago truncatula MTR_4g065017 I 0.738
SapurV1A.0534s0230 Salix purpurea SapurV1A.0534s0230 I 0.738
POPTR_0009s05860 Populus trichocarpa POPTR_0009s05860 I 0.738
gene27001-v1.0-hybrid Fragaria vesca gene27001-v1.0-hybrid I 0.736
Lus10027369.g Linum usitatissimum Lus10027369.g I 0.733
gene14666-v1.0-hybrid Fragaria vesca gene14666-v1.0-hybrid I 0.727
Bra001284 Brassica rapa Bra001284 I 0.727
Lus10002559.g Linum usitatissimum Lus10002559.g I 0.725
POPTR_0001s26590 Populus trichocarpa POPTR_0001s26590 I 0.723
SapurV1A.0925s0070 Salix purpurea SapurV1A.0925s0070 I 0.723
Lus10031850.g Linum usitatissimum Lus10031850.g I 0.716
Lus10039610.g Linum usitatissimum Lus10039610.g I 0.714
Lus10029520.g Linum usitatissimum Lus10029520.g I 0.714
Cucsa.127860 Cucumis sativus Cucsa.127860 I 0.707
GSMUA_AchrUn_randomG22350_001 Musa acuminata GSMUA_AchrUn_randomG22350_001 N 0.685
evm.TU.supercontig_6.280 Carica papaya evm.TU.supercontig_6.280 I 0.676
MYB86 Arabidopsis thaliana AT5G26660 I 0.675
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.675
Bo2g156300 Brassica oleracea Bo2g156300 I 0.675
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.675
Bo9g010860 Brassica oleracea Bo9g010860 I 0.675
Bo7g095130 Brassica oleracea Bo7g095130 I 0.675
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.675
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.675
Bra036588 Brassica rapa Bra036588 I 0.675
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.675
Pavir.Ia03281 Panicum virgatum Pavir.Ia03281 I 0.673
OPUNC01G19230 Oryza punctata OPUNC01G19230 I 0.673
Traes_7AS_2EE7C2628 Triticum aestivum Traes_7AS_2EE7C2628 I 0.671
PDK_20s1854611g001 Phoenix dactylifera PDK_20s1854611g001 I 0.670
Traes_7AL_04D939077 Triticum aestivum Traes_7AL_04D939077 I 0.670
F775_28951 Aegilops tauschii F775_28951 I 0.670
Traes_7DL_5BD0D4BD1 Triticum aestivum Traes_7DL_5BD0D4BD1 I 0.670
GSMUA_Achr10G08070_001 Musa acuminata GSMUA_Achr10G08070_001 I 0.670
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.670
BRADI3G17165 Brachypodium distachyon BRADI3G17165 I 0.670
TRIUR3_24104 Triticum urartu TRIUR3_24104 I 0.670
MTR_8g017390 Medicago truncatula MTR_8g017390 I 0.668
BGIOSGA001460 Oryza indica BGIOSGA001460 I 0.667
ORUFI01G21210 Oryza rufipogon ORUFI01G21210 I 0.667
TRIUR3_27020 Triticum urartu TRIUR3_27020 I 0.665
F775_01821 Aegilops tauschii F775_01821 I 0.665
MLOC_6156 Hordeum vulgare MLOC_6156 I 0.665
TRAES3BF071400020CFD_g Triticum aestivum TRAES3BF071400020CFD_g I 0.665
Pavir.J18139 Panicum virgatum Pavir.J18139 I 0.664
Sb03g024500 Sorghum bicolor Sb03g024500 I 0.664
Pavir.J20716 Panicum virgatum Pavir.J20716 I 0.664
OBART01G18830 Oryza barthii OBART01G18830 I 0.663
OMERI01G17650 Oryza meridionalis OMERI01G17650 I 0.663
OGLUM01G22380 Oryza glumaepatula OGLUM01G22380 I 0.663
ONIVA01G21360 Oryza nivara ONIVA01G21360 I 0.663
BGIOSGA001461 Oryza indica BGIOSGA001461 I 0.663
ORGLA01G0154000 Oryza glaberrima ORGLA01G0154000 I 0.663
Thhalv10023601m.g Eutrema salsugineum Thhalv10023601m.g I 0.662
Bo5g009920 Brassica oleracea Bo5g009920 I 0.662
GSMUA_Achr6G36930_001 Musa acuminata GSMUA_Achr6G36930_001 I 0.662
BRADI2G40620 Brachypodium distachyon BRADI2G40620 I 0.661
PDK_20s1308492g002 Phoenix dactylifera PDK_20s1308492g002 N 0.661
VIT_05s0020g01100 Vitis vinifera VIT_05s0020g01100 I 0.661
GLYMA15G02955 Glycine max GLYMA15G02955 I 0.661
GRMZM2G064744 Zea mays GRMZM2G064744 I 0.661