CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava16780.m1
(
Manihot esculenta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
cassava16780.m1
T284024_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.687
0.723
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS
SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.687
0.723
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.687
0.723
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.687
0.723
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava16780.m1
Myb
222
273
RIRWTKDLHKRFVECVDILGGPVKATPKLILKLMGVEGLTIFHVKSHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Manihot esculenta
TFs
260 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30226.m001993
Ricinus communis
30226.m001993
N
0.768
mgf007532m
Mimulus guttatus
mgf007532m
N
0.757
VIT_13s0156g00390
Vitis vinifera
VIT_13s0156g00390
I
0.757
mgf007985m
Mimulus guttatus
mgf007985m
N
0.757
VIT_08s0007g06310
Vitis vinifera
VIT_08s0007g06310
I
0.742
Aquca_009_00165
Aquilegia coerulea
Aquca_009_00165
N
0.742
orange1.1g035950m.g
Citrus sinensis
orange1.1g035950m.g
N
0.742
Ciclev10033388m.g
Citrus clementina
Ciclev10033388m.g
N
0.742
Aquca_012_00204
Aquilegia coerulea
Aquca_012_00204
N
0.742
PGSC0003DMG400011435
Solanum tuberosum
PGSC0003DMG400011435
N
0.742
Solyc10g078720.1
Solanum lycopersicum
Solyc10g078720.1
N
0.742
MDP0000253656
Malus domestica
MDP0000253656
N
0.714
MDP0000184307
Malus domestica
MDP0000184307
N
0.714
gene22647-v1.0-hybrid
Fragaria vesca
gene22647-v1.0-hybrid
N
0.714
POPTR_0016s04830
Populus trichocarpa
POPTR_0016s04830
N
0.711
GLYMA19G32850
Glycine max
GLYMA19G32850
I
0.709
GLYMA03G29940
Glycine max
GLYMA03G29940
I
0.709
MTR_7g093030
Medicago truncatula
MTR_7g093030
N
0.709
GRMZM2G162409
Zea mays
GRMZM2G162409
I
0.707
OB07G18720
Oryza brachyantha
OB07G18720
I
0.707
GSMUA_Achr7G06370_001
Musa acuminata
GSMUA_Achr7G06370_001
I
0.701
SapurV1A.4156s0010
Salix purpurea
SapurV1A.4156s0010
N
0.699
SapurV1A.0008s0360
Salix purpurea
SapurV1A.0008s0360
N
0.699
BRADI3G22290
Brachypodium distachyon
BRADI3G22290
I
0.695
evm.TU.supercontig_85.82
Carica papaya
evm.TU.supercontig_85.82
N
0.693
Bo9g175820
Brassica oleracea
Bo9g175820
I
0.693
Ciclev10012014m.g
Citrus clementina
Ciclev10012014m.g
N
0.693
Gorai.002G225400
Gossypium raimondii
Gorai.002G225400
N
0.693
Cucsa.353890
Cucumis sativus
Cucsa.353890
N
0.693
Lus10021035.g
Linum usitatissimum
Lus10021035.g
N
0.693
TCM_024886
Theobroma cacao
TCM_024886
N
0.693
Cla011853
Citrullus lanatus
Cla011853
N
0.693
Carubv10003217m.g
Capsella rubella
Carubv10003217m.g
N
0.693
cassava12255.valid.m1
Manihot esculenta
cassava12255.valid.m1
N
0.693
28582.m000316
Ricinus communis
28582.m000316
N
0.693
Bostr.13129s0292
Boechera stricta
Bostr.13129s0292
N
0.693
IGS.gm_4_00058
Chlorella NC64A
IGS.gm_4_00058
I
0.693
Cagra.8005s0016
Capsella grandiflora
Cagra.8005s0016
N
0.693
cassava39743.m1
Manihot esculenta
cassava39743.m1
N
0.693
cassava12254.valid.m1
Manihot esculenta
cassava12254.valid.m1
N
0.693
Gorai.006G142000
Gossypium raimondii
Gorai.006G142000
N
0.693
Bra028717
Brassica rapa
Bra028717
N
0.693
SapurV1A.0251s0040
Salix purpurea
SapurV1A.0251s0040
N
0.693
CHLREDRAFT_196473
Chlamydomonas reinhardtii
CHLREDRAFT_196473
I
0.693
Bo2g007410
Brassica oleracea
Bo2g007410
N
0.693
fgenesh2_kg.6__627__AT5G06800.1
Arabidopsis lyrata
fgenesh2_kg.6__627__AT5G06800.1
N
0.693
SapurV1A.0018s0530
Salix purpurea
SapurV1A.0018s0530
N
0.693
Thhalv10013850m.g
Eutrema salsugineum
Thhalv10013850m.g
N
0.693
orange1.1g018583m.g
Citrus sinensis
orange1.1g018583m.g
N
0.693
Bra009228
Brassica rapa
Bra009228
I
0.693
Lus10023816.g
Linum usitatissimum
Lus10023816.g
N
0.692
Lus10005036.g
Linum usitatissimum
Lus10005036.g
I
0.689
Lus10004809.g
Linum usitatissimum
Lus10004809.g
I
0.689
VIT_13s0156g00370
Vitis vinifera
VIT_13s0156g00370
N
0.689
TCM_021688
Theobroma cacao
TCM_021688
I
0.689
Lus10027806.g
Linum usitatissimum
Lus10027806.g
I
0.689
Ciclev10013453m.g
Citrus clementina
Ciclev10013453m.g
I
0.689
orange1.1g025728m.g
Citrus sinensis
orange1.1g025728m.g
I
0.689
Sb02g020700
Sorghum bicolor
Sb02g020700
I
0.687
29805.m001544
Ricinus communis
29805.m001544
I
0.687
Cucsa.044390
Cucumis sativus
Cucsa.044390
I
0.687
cassava13406.valid.m1
Manihot esculenta
cassava13406.valid.m1
I
0.687
PRUPE_ppa009121mg
Prunus persica
PRUPE_ppa009121mg
I
0.687
cassava36261.valid.m1
Manihot esculenta
cassava36261.valid.m1
I
0.687
cassava36260.valid.m1
Manihot esculenta
cassava36260.valid.m1
I
0.687
Pm009657
Prunus mume
Pm009657
I
0.687
cassava13407.valid.m1
Manihot esculenta
cassava13407.valid.m1
I
0.687
Si014152m.g
Setaria italica
Si014152m.g
I
0.687
Bo3g004040
Brassica oleracea
Bo3g004040
N
0.687
Si030592m.g
Setaria italica
Si030592m.g
I
0.687
Solyc11g022470.1
Solanum lycopersicum
Solyc11g022470.1
I
0.687
Solyc11g067280.1
Solanum lycopersicum
Solyc11g067280.1
I
0.687
VIT_00s0475g00040
Vitis vinifera
VIT_00s0475g00040
I
0.687
BGIOSGA030474
Oryza indica
BGIOSGA030474
I
0.687
SELMODRAFT_47417
Selaginella moellendorffii
SELMODRAFT_47417
I
0.687
SELMODRAFT_57477
Selaginella moellendorffii
SELMODRAFT_57477
I
0.687
Ca_07939
Cicer arietinum
Ca_07939
I
0.687
BGIOSGA028511
Oryza indica
BGIOSGA028511
I
0.687
Cla014593
Citrullus lanatus
Cla014593
I
0.687
Cagra.2315s0003
Capsella grandiflora
Cagra.2315s0003
I
0.687
Lus10038734.g
Linum usitatissimum
Lus10038734.g
I
0.687
Lus10039124.g
Linum usitatissimum
Lus10039124.g
I
0.687
Gorai.010G247100
Gossypium raimondii
Gorai.010G247100
I
0.687
PK10342.1
Cannabis sativa
PK10342.1
D
0.687
evm.TU.supercontig_27.185
Carica papaya
evm.TU.supercontig_27.185
I
0.687
gene19867-v1.0-hybrid
Fragaria vesca
gene19867-v1.0-hybrid
I
0.687
Thhalv10000981m.g
Eutrema salsugineum
Thhalv10000981m.g
I
0.687
MDP0000323119
Malus domestica
MDP0000323119
I
0.687
SapurV1A.0089s0170
Salix purpurea
SapurV1A.0089s0170
I
0.687
SapurV1A.0220s0460
Salix purpurea
SapurV1A.0220s0460
I
0.687
Pavir.Bb01632
Panicum virgatum
Pavir.Bb01632
I
0.687
Pavir.Ba02820
Panicum virgatum
Pavir.Ba02820
I
0.687
orange1.1g020124m.g
Citrus sinensis
orange1.1g020124m.g
I
0.687
AMTR_s00061p00095620
Amborella trichopoda
AMTR_s00061p00095620
I
0.687
Eucgr.D00972
Eucalyptus grandis
Eucgr.D00972
I
0.687
Ciclev10015893m.g
Citrus clementina
Ciclev10015893m.g
I
0.687
mgf007291m
Mimulus guttatus
mgf007291m
I
0.687
BGIOSGA023251
Oryza indica
BGIOSGA023251
I
0.687
mgf006394m
Mimulus guttatus
mgf006394m
I
0.687
mgf003647m
Mimulus guttatus
mgf003647m
I
0.687
estExt_fgenesh1_pg.C_2690029
Physcomitrella patens
estExt_fgenesh1_pg.C_2690029
I
0.687
mgf002744m
Mimulus guttatus
mgf002744m
I
0.687
mgf012689m
Mimulus guttatus
mgf012689m
I
0.687
mgf014369m
Mimulus guttatus
mgf014369m
I
0.687
Carubv10017769m.g
Capsella rubella
Carubv10017769m.g
I
0.687
PDK_20s1369041g001
Phoenix dactylifera
PDK_20s1369041g001
I
0.687
Bostr.7903s0063
Boechera stricta
Bostr.7903s0063
I
0.687
PHL7
Arabidopsis thaliana
AT2G01060
D
0.687
mgf015945m
Mimulus guttatus
mgf015945m
I
0.687
estExt_fgenesh1_pg.C_2260017
Physcomitrella patens
estExt_fgenesh1_pg.C_2260017
I
0.687
TCM_030480
Theobroma cacao
TCM_030480
I
0.687
OLONG_023378
Oryza longistaminata
OLONG_023378
I
0.687
OMERI06G21260
Oryza meridionalis
OMERI06G21260
I
0.687
ONIVA06G24430
Oryza nivara
ONIVA06G24430
I
0.687
OGLUM09G05280
Oryza glumaepatula
OGLUM09G05280
I
0.687
POPTR_0016s00310
Populus trichocarpa
POPTR_0016s00310
I
0.687
OBART08G11790
Oryza barthii
OBART08G11790
I
0.687
OBART09G04530
Oryza barthii
OBART09G04530
I
0.687
OGLUM06G21780
Oryza glumaepatula
OGLUM06G21780
I
0.687
ONIVA09G02590
Oryza nivara
ONIVA09G02590
I
0.687
ONIVA09G04730
Oryza nivara
ONIVA09G04730
I
0.687
ORGLA08G0104600
Oryza glaberrima
ORGLA08G0104600
I
0.687
ORGLA09G0034900
Oryza glaberrima
ORGLA09G0034900
I
0.687
ORUFI06G22120
Oryza rufipogon
ORUFI06G22120
I
0.687
ORGLA06G0171400
Oryza glaberrima
ORGLA06G0171400
I
0.687
OPUNC09G03970
Oryza punctata
OPUNC09G03970
I
0.687
OPUNC06G18860
Oryza punctata
OPUNC06G18860
I
0.687
OPUNC08G10740
Oryza punctata
OPUNC08G10740
I
0.687
OBART06G20690
Oryza barthii
OBART06G20690
I
0.687
OB09G12870
Oryza brachyantha
OB09G12870
I
0.687
fgenesh2_kg.5__3__AT2G01060.1
Arabidopsis lyrata
fgenesh2_kg.5__3__AT2G01060.1
I
0.687
GLYMA09G02040
Glycine max
GLYMA09G02040
I
0.687
GLYMA15G12940
Glycine max
GLYMA15G12940
I
0.687
Bra024909
Brassica rapa
Bra024909
I
0.687
Bra014348
Brassica rapa
Bra014348
I
0.687
Bo7g077990
Brassica oleracea
Bo7g077990
I
0.687
Bra005912
Brassica rapa
Bra005912
N
0.687
GRMZM2G173943
Zea mays
GRMZM2G173943
I
0.687
GSMUA_Achr3G11970_001
Musa acuminata
GSMUA_Achr3G11970_001
I
0.687
MTR_2g027860
Medicago truncatula
MTR_2g027860
I
0.687
OB06G28540
Oryza brachyantha
OB06G28540
I
0.687
OB08G20230
Oryza brachyantha
OB08G20230
I
0.687
LPERR09G03210
Leersia perrieri
LPERR09G03210
I
0.687
LPERR08G09750
Leersia perrieri
LPERR08G09750
I
0.687
GSMUA_Achr3G28410_001
Musa acuminata
GSMUA_Achr3G28410_001
I
0.687
LPERR06G17280
Leersia perrieri
LPERR06G17280
I
0.687
ORUFI08G13040
Oryza rufipogon
ORUFI08G13040
I
0.687
OGLUM08G12610
Oryza glumaepatula
OGLUM08G12610
I
0.687
PGSC0003DMG400008786
Solanum tuberosum
PGSC0003DMG400008786
I
0.687
OS08G0346500
Oryza sativa
OS08G0346500
I
0.687
POPTR_0006s00290
Populus trichocarpa
POPTR_0006s00290
I
0.687
OS09G0299200
Oryza sativa
OS09G0299200
I
0.687
ORUFI09G05110
Oryza rufipogon
ORUFI09G05110
I
0.687
OS06G0609500
Oryza sativa
OS06G0609500
I
0.687
PGSC0003DMG400007401
Solanum tuberosum
PGSC0003DMG400007401
I
0.687
MTR_1g053835
Medicago truncatula
MTR_1g053835
N
0.685
GLYMA09G17404
Glycine max
GLYMA09G17404
N
0.685
Ca_14198
Cicer arietinum
Ca_14198
N
0.685
chr5.LjT42I01.50.nd
Lotus japonicus
chr5.LjT42I01.50.nd
I
0.685
POPTR_0006s20540
Populus trichocarpa
POPTR_0006s20540
N
0.685
Gorai.006G182800
Gossypium raimondii
Gorai.006G182800
I
0.682
chr1.LjB18K24.110.nd
Lotus japonicus
chr1.LjB18K24.110.nd
I
0.682
BGIOSGA014151
Oryza indica
BGIOSGA014151
I
0.681
OGLUM04G28560
Oryza glumaepatula
OGLUM04G28560
I
0.681
MDP0000826899
Malus domestica
MDP0000826899
I
0.681
OS04G0665600
Oryza sativa
OS04G0665600
I
0.681
OLONG_005000
Oryza longistaminata
OLONG_005000
I
0.681
GSMUA_Achr4G11370_001
Musa acuminata
GSMUA_Achr4G11370_001
I
0.681
TRIUR3_18000
Triticum urartu
TRIUR3_18000
I
0.681
ORUFI04G30350
Oryza rufipogon
ORUFI04G30350
I
0.681
POPTR_0016s12430
Populus trichocarpa
POPTR_0016s12430
I
0.681
MLOC_52271
Hordeum vulgare
MLOC_52271
I
0.681
OB04G35670
Oryza brachyantha
OB04G35670
I
0.681
Si022099m.g
Setaria italica
Si022099m.g
I
0.681
OMERI04G24260
Oryza meridionalis
OMERI04G24260
I
0.681
OBART04G28680
Oryza barthii
OBART04G28680
I
0.681
LPERR04G24240
Leersia perrieri
LPERR04G24240
I
0.681
GRMZM2G124495
Zea mays
GRMZM2G124495
I
0.681
OPUNC04G26200
Oryza punctata
OPUNC04G26200
I
0.681
Traes_7AL_A33076690
Triticum aestivum
Traes_7AL_A33076690
I
0.681
BRADI5G25320
Brachypodium distachyon
BRADI5G25320
I
0.681
ORGLA04G0249600
Oryza glaberrima
ORGLA04G0249600
I
0.681
Pavir.Ga00160
Panicum virgatum
Pavir.Ga00160
I
0.681
POPTR_0006s10190
Populus trichocarpa
POPTR_0006s10190
I
0.681
Sb06g031970
Sorghum bicolor
Sb06g031970
I
0.681
ONIVA04G27220
Oryza nivara
ONIVA04G27220
I
0.681
GSMUA_Achr4G19300_001
Musa acuminata
GSMUA_Achr4G19300_001
I
0.680
BRADI5G20520
Brachypodium distachyon
BRADI5G20520
I
0.679
Lus10002483.g
Linum usitatissimum
Lus10002483.g
I
0.678
PRUPE_ppa016067mg
Prunus persica
PRUPE_ppa016067mg
N
0.675
Pm025973
Prunus mume
Pm025973
N
0.675
AT5G06800
Arabidopsis thaliana
AT5G06800
N
0.675
evm.TU.supercontig_10.14
Carica papaya
evm.TU.supercontig_10.14
I
0.674
Si017191m.g
Setaria italica
Si017191m.g
I
0.674
Traes_7DL_090D0E08E
Triticum aestivum
Traes_7DL_090D0E08E
I
0.674
OB06G34350
Oryza brachyantha
OB06G34350
I
0.674
Gorai.011G001500
Gossypium raimondii
Gorai.011G001500
I
0.674
ORGLA06G0222600
Oryza glaberrima
ORGLA06G0222600
I
0.674
F775_29452
Aegilops tauschii
F775_29452
I
0.674
TRIUR3_32904
Triticum urartu
TRIUR3_32904
I
0.674
Pavir.J14911
Panicum virgatum
Pavir.J14911
I
0.674
Pavir.Db00228
Panicum virgatum
Pavir.Db00228
I
0.674
Pavir.Aa03223
Panicum virgatum
Pavir.Aa03223
I
0.674
OS06G0703900
Oryza sativa
OS06G0703900
I
0.674
Traes_7AL_D45376F32
Triticum aestivum
Traes_7AL_D45376F32
I
0.674
BGIOSGA023563
Oryza indica
BGIOSGA023563
I
0.674
AMTR_s00026p00153500
Amborella trichopoda
AMTR_s00026p00153500
I
0.674
Traes_7BL_09DD5A1DC
Triticum aestivum
Traes_7BL_09DD5A1DC
I
0.674
MLOC_54829
Hordeum vulgare
MLOC_54829
I
0.674
Si006354m.g
Setaria italica
Si006354m.g
I
0.674
Eucgr.A02444
Eucalyptus grandis
Eucgr.A02444
N
0.673
SELMODRAFT_447260
Selaginella moellendorffii
SELMODRAFT_447260
I
0.672
SELMODRAFT_405399
Selaginella moellendorffii
SELMODRAFT_405399
I
0.672
PDK_20s1384631g001
Phoenix dactylifera
PDK_20s1384631g001
I
0.672
VIT_08s0007g06180
Vitis vinifera
VIT_08s0007g06180
I
0.671
PK00827.1
Cannabis sativa
PK00827.1
N
0.671
TCM_026171
Theobroma cacao
TCM_026171
I
0.670
mgf017208m
Mimulus guttatus
mgf017208m
N
0.670
28582.m000318
Ricinus communis
28582.m000318
N
0.669
Pavir.J05593
Panicum virgatum
Pavir.J05593
I
0.669
MDP0000280005
Malus domestica
MDP0000280005
N
0.669
Sb10g029200
Sorghum bicolor
Sb10g029200
I
0.668
Ca_07304
Cicer arietinum
Ca_07304
I
0.668
F775_05042
Aegilops tauschii
F775_05042
I
0.667
Traes_6BS_00D311B94
Triticum aestivum
Traes_6BS_00D311B94
I
0.667
GSMUA_Achr7G06180_001
Musa acuminata
GSMUA_Achr7G06180_001
I
0.667
Aquca_016_00381
Aquilegia coerulea
Aquca_016_00381
I
0.667
Traes_6DS_20D189350
Triticum aestivum
Traes_6DS_20D189350
I
0.667
PDK_20s1467851g002
Phoenix dactylifera
PDK_20s1467851g002
I
0.666
Cla017754
Citrullus lanatus
Cla017754
I
0.665
GLYMA03G00590
Glycine max
GLYMA03G00590
I
0.665
evm.TU.supercontig_33.181
Carica papaya
evm.TU.supercontig_33.181
I
0.665
Pm025479
Prunus mume
Pm025479
I
0.665
PRUPE_ppa009512mg
Prunus persica
PRUPE_ppa009512mg
I
0.665
Cucsa.337130
Cucumis sativus
Cucsa.337130
I
0.665
GLYMA19G30220
Glycine max
GLYMA19G30220
I
0.665
AMTR_s00095p00071020
Amborella trichopoda
AMTR_s00095p00071020
I
0.665
MDP0000232923
Malus domestica
MDP0000232923
I
0.665
chr1.CM0098.390.nd
Lotus japonicus
chr1.CM0098.390.nd
I
0.665
Aquca_009_00105
Aquilegia coerulea
Aquca_009_00105
I
0.665
Ca_08144
Cicer arietinum
Ca_08144
I
0.665
MDP0000323121
Malus domestica
MDP0000323121
I
0.665
MTR_7g088070
Medicago truncatula
MTR_7g088070
I
0.665
VIT_08s0040g00100
Vitis vinifera
VIT_08s0040g00100
I
0.665
gene27918-v1.0-hybrid
Fragaria vesca
gene27918-v1.0-hybrid
I
0.665
BRADI4G27607
Brachypodium distachyon
BRADI4G27607
I
0.661
Traes_5BL_A28533902
Triticum aestivum
Traes_5BL_A28533902
I
0.661
Si030441m.g
Setaria italica
Si030441m.g
I
0.661
OS09G0299000
Oryza sativa
OS09G0299000
I
0.661
ORUFI09G05100
Oryza rufipogon
ORUFI09G05100
I
0.661
LPERR09G03200
Leersia perrieri
LPERR09G03200
I
0.661
MLOC_56761
Hordeum vulgare
MLOC_56761
I
0.661
OBART09G04520
Oryza barthii
OBART09G04520
I
0.661
OGLUM09G05270
Oryza glumaepatula
OGLUM09G05270
I
0.661
Pavir.Bb01629
Panicum virgatum
Pavir.Bb01629
I
0.661
ONIVA09G04720
Oryza nivara
ONIVA09G04720
I
0.661
Traes_5DL_156E53683
Triticum aestivum
Traes_5DL_156E53683
I
0.661
OMERI09G03700
Oryza meridionalis
OMERI09G03700
I
0.661
GRMZM2G064197
Zea mays
GRMZM2G064197
I
0.661
OPUNC09G03960
Oryza punctata
OPUNC09G03960
I
0.661