cassava16780.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava16780.m1 T284024_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN

NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.687 0.723
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS

SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.687 0.723
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN

NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.687 0.723
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH

DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.687 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava16780.m1 Myb 222 273

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

260 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30226.m001993 Ricinus communis 30226.m001993 N 0.768
mgf007532m Mimulus guttatus mgf007532m N 0.757
VIT_13s0156g00390 Vitis vinifera VIT_13s0156g00390 I 0.757
mgf007985m Mimulus guttatus mgf007985m N 0.757
VIT_08s0007g06310 Vitis vinifera VIT_08s0007g06310 I 0.742
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N 0.742
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N 0.742
Ciclev10033388m.g Citrus clementina Ciclev10033388m.g N 0.742
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N 0.742
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N 0.742
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N 0.742
MDP0000253656 Malus domestica MDP0000253656 N 0.714
MDP0000184307 Malus domestica MDP0000184307 N 0.714
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N 0.714
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N 0.711
GLYMA19G32850 Glycine max GLYMA19G32850 I 0.709
GLYMA03G29940 Glycine max GLYMA03G29940 I 0.709
MTR_7g093030 Medicago truncatula MTR_7g093030 N 0.709
GRMZM2G162409 Zea mays GRMZM2G162409 I 0.707
OB07G18720 Oryza brachyantha OB07G18720 I 0.707
GSMUA_Achr7G06370_001 Musa acuminata GSMUA_Achr7G06370_001 I 0.701
SapurV1A.4156s0010 Salix purpurea SapurV1A.4156s0010 N 0.699
SapurV1A.0008s0360 Salix purpurea SapurV1A.0008s0360 N 0.699
BRADI3G22290 Brachypodium distachyon BRADI3G22290 I 0.695
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N 0.693
Bo9g175820 Brassica oleracea Bo9g175820 I 0.693
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N 0.693
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N 0.693
Cucsa.353890 Cucumis sativus Cucsa.353890 N 0.693
Lus10021035.g Linum usitatissimum Lus10021035.g N 0.693
TCM_024886 Theobroma cacao TCM_024886 N 0.693
Cla011853 Citrullus lanatus Cla011853 N 0.693
Carubv10003217m.g Capsella rubella Carubv10003217m.g N 0.693
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N 0.693
28582.m000316 Ricinus communis 28582.m000316 N 0.693
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N 0.693
IGS.gm_4_00058 Chlorella NC64A IGS.gm_4_00058 I 0.693
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N 0.693
cassava39743.m1 Manihot esculenta cassava39743.m1 N 0.693
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N 0.693
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N 0.693
Bra028717 Brassica rapa Bra028717 N 0.693
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N 0.693
CHLREDRAFT_196473 Chlamydomonas reinhardtii CHLREDRAFT_196473 I 0.693
Bo2g007410 Brassica oleracea Bo2g007410 N 0.693
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N 0.693
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N 0.693
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N 0.693
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N 0.693
Bra009228 Brassica rapa Bra009228 I 0.693
Lus10023816.g Linum usitatissimum Lus10023816.g N 0.692
Lus10005036.g Linum usitatissimum Lus10005036.g I 0.689
Lus10004809.g Linum usitatissimum Lus10004809.g I 0.689
VIT_13s0156g00370 Vitis vinifera VIT_13s0156g00370 N 0.689
TCM_021688 Theobroma cacao TCM_021688 I 0.689
Lus10027806.g Linum usitatissimum Lus10027806.g I 0.689
Ciclev10013453m.g Citrus clementina Ciclev10013453m.g I 0.689
orange1.1g025728m.g Citrus sinensis orange1.1g025728m.g I 0.689
Sb02g020700 Sorghum bicolor Sb02g020700 I 0.687
29805.m001544 Ricinus communis 29805.m001544 I 0.687
Cucsa.044390 Cucumis sativus Cucsa.044390 I 0.687
cassava13406.valid.m1 Manihot esculenta cassava13406.valid.m1 I 0.687
PRUPE_ppa009121mg Prunus persica PRUPE_ppa009121mg I 0.687
cassava36261.valid.m1 Manihot esculenta cassava36261.valid.m1 I 0.687
cassava36260.valid.m1 Manihot esculenta cassava36260.valid.m1 I 0.687
Pm009657 Prunus mume Pm009657 I 0.687
cassava13407.valid.m1 Manihot esculenta cassava13407.valid.m1 I 0.687
Si014152m.g Setaria italica Si014152m.g I 0.687
Bo3g004040 Brassica oleracea Bo3g004040 N 0.687
Si030592m.g Setaria italica Si030592m.g I 0.687
Solyc11g022470.1 Solanum lycopersicum Solyc11g022470.1 I 0.687
Solyc11g067280.1 Solanum lycopersicum Solyc11g067280.1 I 0.687
VIT_00s0475g00040 Vitis vinifera VIT_00s0475g00040 I 0.687
BGIOSGA030474 Oryza indica BGIOSGA030474 I 0.687
SELMODRAFT_47417 Selaginella moellendorffii SELMODRAFT_47417 I 0.687
SELMODRAFT_57477 Selaginella moellendorffii SELMODRAFT_57477 I 0.687
Ca_07939 Cicer arietinum Ca_07939 I 0.687
BGIOSGA028511 Oryza indica BGIOSGA028511 I 0.687
Cla014593 Citrullus lanatus Cla014593 I 0.687
Cagra.2315s0003 Capsella grandiflora Cagra.2315s0003 I 0.687
Lus10038734.g Linum usitatissimum Lus10038734.g I 0.687
Lus10039124.g Linum usitatissimum Lus10039124.g I 0.687
Gorai.010G247100 Gossypium raimondii Gorai.010G247100 I 0.687
PK10342.1 Cannabis sativa PK10342.1 D 0.687
evm.TU.supercontig_27.185 Carica papaya evm.TU.supercontig_27.185 I 0.687
gene19867-v1.0-hybrid Fragaria vesca gene19867-v1.0-hybrid I 0.687
Thhalv10000981m.g Eutrema salsugineum Thhalv10000981m.g I 0.687
MDP0000323119 Malus domestica MDP0000323119 I 0.687
SapurV1A.0089s0170 Salix purpurea SapurV1A.0089s0170 I 0.687
SapurV1A.0220s0460 Salix purpurea SapurV1A.0220s0460 I 0.687
Pavir.Bb01632 Panicum virgatum Pavir.Bb01632 I 0.687
Pavir.Ba02820 Panicum virgatum Pavir.Ba02820 I 0.687
orange1.1g020124m.g Citrus sinensis orange1.1g020124m.g I 0.687
AMTR_s00061p00095620 Amborella trichopoda AMTR_s00061p00095620 I 0.687
Eucgr.D00972 Eucalyptus grandis Eucgr.D00972 I 0.687
Ciclev10015893m.g Citrus clementina Ciclev10015893m.g I 0.687
mgf007291m Mimulus guttatus mgf007291m I 0.687
BGIOSGA023251 Oryza indica BGIOSGA023251 I 0.687
mgf006394m Mimulus guttatus mgf006394m I 0.687
mgf003647m Mimulus guttatus mgf003647m I 0.687
estExt_fgenesh1_pg.C_2690029 Physcomitrella patens estExt_fgenesh1_pg.C_2690029 I 0.687
mgf002744m Mimulus guttatus mgf002744m I 0.687
mgf012689m Mimulus guttatus mgf012689m I 0.687
mgf014369m Mimulus guttatus mgf014369m I 0.687
Carubv10017769m.g Capsella rubella Carubv10017769m.g I 0.687
PDK_20s1369041g001 Phoenix dactylifera PDK_20s1369041g001 I 0.687
Bostr.7903s0063 Boechera stricta Bostr.7903s0063 I 0.687
PHL7 Arabidopsis thaliana AT2G01060 D 0.687
mgf015945m Mimulus guttatus mgf015945m I 0.687
estExt_fgenesh1_pg.C_2260017 Physcomitrella patens estExt_fgenesh1_pg.C_2260017 I 0.687
TCM_030480 Theobroma cacao TCM_030480 I 0.687
OLONG_023378 Oryza longistaminata OLONG_023378 I 0.687
OMERI06G21260 Oryza meridionalis OMERI06G21260 I 0.687
ONIVA06G24430 Oryza nivara ONIVA06G24430 I 0.687
OGLUM09G05280 Oryza glumaepatula OGLUM09G05280 I 0.687
POPTR_0016s00310 Populus trichocarpa POPTR_0016s00310 I 0.687
OBART08G11790 Oryza barthii OBART08G11790 I 0.687
OBART09G04530 Oryza barthii OBART09G04530 I 0.687
OGLUM06G21780 Oryza glumaepatula OGLUM06G21780 I 0.687
ONIVA09G02590 Oryza nivara ONIVA09G02590 I 0.687
ONIVA09G04730 Oryza nivara ONIVA09G04730 I 0.687
ORGLA08G0104600 Oryza glaberrima ORGLA08G0104600 I 0.687
ORGLA09G0034900 Oryza glaberrima ORGLA09G0034900 I 0.687
ORUFI06G22120 Oryza rufipogon ORUFI06G22120 I 0.687
ORGLA06G0171400 Oryza glaberrima ORGLA06G0171400 I 0.687
OPUNC09G03970 Oryza punctata OPUNC09G03970 I 0.687
OPUNC06G18860 Oryza punctata OPUNC06G18860 I 0.687
OPUNC08G10740 Oryza punctata OPUNC08G10740 I 0.687
OBART06G20690 Oryza barthii OBART06G20690 I 0.687
OB09G12870 Oryza brachyantha OB09G12870 I 0.687
fgenesh2_kg.5__3__AT2G01060.1 Arabidopsis lyrata fgenesh2_kg.5__3__AT2G01060.1 I 0.687
GLYMA09G02040 Glycine max GLYMA09G02040 I 0.687
GLYMA15G12940 Glycine max GLYMA15G12940 I 0.687
Bra024909 Brassica rapa Bra024909 I 0.687
Bra014348 Brassica rapa Bra014348 I 0.687
Bo7g077990 Brassica oleracea Bo7g077990 I 0.687
Bra005912 Brassica rapa Bra005912 N 0.687
GRMZM2G173943 Zea mays GRMZM2G173943 I 0.687
GSMUA_Achr3G11970_001 Musa acuminata GSMUA_Achr3G11970_001 I 0.687
MTR_2g027860 Medicago truncatula MTR_2g027860 I 0.687
OB06G28540 Oryza brachyantha OB06G28540 I 0.687
OB08G20230 Oryza brachyantha OB08G20230 I 0.687
LPERR09G03210 Leersia perrieri LPERR09G03210 I 0.687
LPERR08G09750 Leersia perrieri LPERR08G09750 I 0.687
GSMUA_Achr3G28410_001 Musa acuminata GSMUA_Achr3G28410_001 I 0.687
LPERR06G17280 Leersia perrieri LPERR06G17280 I 0.687
ORUFI08G13040 Oryza rufipogon ORUFI08G13040 I 0.687
OGLUM08G12610 Oryza glumaepatula OGLUM08G12610 I 0.687
PGSC0003DMG400008786 Solanum tuberosum PGSC0003DMG400008786 I 0.687
OS08G0346500 Oryza sativa OS08G0346500 I 0.687
POPTR_0006s00290 Populus trichocarpa POPTR_0006s00290 I 0.687
OS09G0299200 Oryza sativa OS09G0299200 I 0.687
ORUFI09G05110 Oryza rufipogon ORUFI09G05110 I 0.687
OS06G0609500 Oryza sativa OS06G0609500 I 0.687
PGSC0003DMG400007401 Solanum tuberosum PGSC0003DMG400007401 I 0.687
MTR_1g053835 Medicago truncatula MTR_1g053835 N 0.685
GLYMA09G17404 Glycine max GLYMA09G17404 N 0.685
Ca_14198 Cicer arietinum Ca_14198 N 0.685
chr5.LjT42I01.50.nd Lotus japonicus chr5.LjT42I01.50.nd I 0.685
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N 0.685
Gorai.006G182800 Gossypium raimondii Gorai.006G182800 I 0.682
chr1.LjB18K24.110.nd Lotus japonicus chr1.LjB18K24.110.nd I 0.682
BGIOSGA014151 Oryza indica BGIOSGA014151 I 0.681
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I 0.681
MDP0000826899 Malus domestica MDP0000826899 I 0.681
OS04G0665600 Oryza sativa OS04G0665600 I 0.681
OLONG_005000 Oryza longistaminata OLONG_005000 I 0.681
GSMUA_Achr4G11370_001 Musa acuminata GSMUA_Achr4G11370_001 I 0.681
TRIUR3_18000 Triticum urartu TRIUR3_18000 I 0.681
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I 0.681
POPTR_0016s12430 Populus trichocarpa POPTR_0016s12430 I 0.681
MLOC_52271 Hordeum vulgare MLOC_52271 I 0.681
OB04G35670 Oryza brachyantha OB04G35670 I 0.681
Si022099m.g Setaria italica Si022099m.g I 0.681
OMERI04G24260 Oryza meridionalis OMERI04G24260 I 0.681
OBART04G28680 Oryza barthii OBART04G28680 I 0.681
LPERR04G24240 Leersia perrieri LPERR04G24240 I 0.681
GRMZM2G124495 Zea mays GRMZM2G124495 I 0.681
OPUNC04G26200 Oryza punctata OPUNC04G26200 I 0.681
Traes_7AL_A33076690 Triticum aestivum Traes_7AL_A33076690 I 0.681
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I 0.681
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I 0.681
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I 0.681
POPTR_0006s10190 Populus trichocarpa POPTR_0006s10190 I 0.681
Sb06g031970 Sorghum bicolor Sb06g031970 I 0.681
ONIVA04G27220 Oryza nivara ONIVA04G27220 I 0.681
GSMUA_Achr4G19300_001 Musa acuminata GSMUA_Achr4G19300_001 I 0.680
BRADI5G20520 Brachypodium distachyon BRADI5G20520 I 0.679
Lus10002483.g Linum usitatissimum Lus10002483.g I 0.678
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N 0.675
Pm025973 Prunus mume Pm025973 N 0.675
AT5G06800 Arabidopsis thaliana AT5G06800 N 0.675
evm.TU.supercontig_10.14 Carica papaya evm.TU.supercontig_10.14 I 0.674
Si017191m.g Setaria italica Si017191m.g I 0.674
Traes_7DL_090D0E08E Triticum aestivum Traes_7DL_090D0E08E I 0.674
OB06G34350 Oryza brachyantha OB06G34350 I 0.674
Gorai.011G001500 Gossypium raimondii Gorai.011G001500 I 0.674
ORGLA06G0222600 Oryza glaberrima ORGLA06G0222600 I 0.674
F775_29452 Aegilops tauschii F775_29452 I 0.674
TRIUR3_32904 Triticum urartu TRIUR3_32904 I 0.674
Pavir.J14911 Panicum virgatum Pavir.J14911 I 0.674
Pavir.Db00228 Panicum virgatum Pavir.Db00228 I 0.674
Pavir.Aa03223 Panicum virgatum Pavir.Aa03223 I 0.674
OS06G0703900 Oryza sativa OS06G0703900 I 0.674
Traes_7AL_D45376F32 Triticum aestivum Traes_7AL_D45376F32 I 0.674
BGIOSGA023563 Oryza indica BGIOSGA023563 I 0.674
AMTR_s00026p00153500 Amborella trichopoda AMTR_s00026p00153500 I 0.674
Traes_7BL_09DD5A1DC Triticum aestivum Traes_7BL_09DD5A1DC I 0.674
MLOC_54829 Hordeum vulgare MLOC_54829 I 0.674
Si006354m.g Setaria italica Si006354m.g I 0.674
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.673
SELMODRAFT_447260 Selaginella moellendorffii SELMODRAFT_447260 I 0.672
SELMODRAFT_405399 Selaginella moellendorffii SELMODRAFT_405399 I 0.672
PDK_20s1384631g001 Phoenix dactylifera PDK_20s1384631g001 I 0.672
VIT_08s0007g06180 Vitis vinifera VIT_08s0007g06180 I 0.671
PK00827.1 Cannabis sativa PK00827.1 N 0.671
TCM_026171 Theobroma cacao TCM_026171 I 0.670
mgf017208m Mimulus guttatus mgf017208m N 0.670
28582.m000318 Ricinus communis 28582.m000318 N 0.669
Pavir.J05593 Panicum virgatum Pavir.J05593 I 0.669
MDP0000280005 Malus domestica MDP0000280005 N 0.669
Sb10g029200 Sorghum bicolor Sb10g029200 I 0.668
Ca_07304 Cicer arietinum Ca_07304 I 0.668
F775_05042 Aegilops tauschii F775_05042 I 0.667
Traes_6BS_00D311B94 Triticum aestivum Traes_6BS_00D311B94 I 0.667
GSMUA_Achr7G06180_001 Musa acuminata GSMUA_Achr7G06180_001 I 0.667
Aquca_016_00381 Aquilegia coerulea Aquca_016_00381 I 0.667
Traes_6DS_20D189350 Triticum aestivum Traes_6DS_20D189350 I 0.667
PDK_20s1467851g002 Phoenix dactylifera PDK_20s1467851g002 I 0.666
Cla017754 Citrullus lanatus Cla017754 I 0.665
GLYMA03G00590 Glycine max GLYMA03G00590 I 0.665
evm.TU.supercontig_33.181 Carica papaya evm.TU.supercontig_33.181 I 0.665
Pm025479 Prunus mume Pm025479 I 0.665
PRUPE_ppa009512mg Prunus persica PRUPE_ppa009512mg I 0.665
Cucsa.337130 Cucumis sativus Cucsa.337130 I 0.665
GLYMA19G30220 Glycine max GLYMA19G30220 I 0.665
AMTR_s00095p00071020 Amborella trichopoda AMTR_s00095p00071020 I 0.665
MDP0000232923 Malus domestica MDP0000232923 I 0.665
chr1.CM0098.390.nd Lotus japonicus chr1.CM0098.390.nd I 0.665
Aquca_009_00105 Aquilegia coerulea Aquca_009_00105 I 0.665
Ca_08144 Cicer arietinum Ca_08144 I 0.665
MDP0000323121 Malus domestica MDP0000323121 I 0.665
MTR_7g088070 Medicago truncatula MTR_7g088070 I 0.665
VIT_08s0040g00100 Vitis vinifera VIT_08s0040g00100 I 0.665
gene27918-v1.0-hybrid Fragaria vesca gene27918-v1.0-hybrid I 0.665
BRADI4G27607 Brachypodium distachyon BRADI4G27607 I 0.661
Traes_5BL_A28533902 Triticum aestivum Traes_5BL_A28533902 I 0.661
Si030441m.g Setaria italica Si030441m.g I 0.661
OS09G0299000 Oryza sativa OS09G0299000 I 0.661
ORUFI09G05100 Oryza rufipogon ORUFI09G05100 I 0.661
LPERR09G03200 Leersia perrieri LPERR09G03200 I 0.661
MLOC_56761 Hordeum vulgare MLOC_56761 I 0.661
OBART09G04520 Oryza barthii OBART09G04520 I 0.661
OGLUM09G05270 Oryza glumaepatula OGLUM09G05270 I 0.661
Pavir.Bb01629 Panicum virgatum Pavir.Bb01629 I 0.661
ONIVA09G04720 Oryza nivara ONIVA09G04720 I 0.661
Traes_5DL_156E53683 Triticum aestivum Traes_5DL_156E53683 I 0.661
OMERI09G03700 Oryza meridionalis OMERI09G03700 I 0.661
GRMZM2G064197 Zea mays GRMZM2G064197 I 0.661
OPUNC09G03960 Oryza punctata OPUNC09G03960 I 0.661