30226.m001993 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 30226.m001993 T283927_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
30226.m001993 Myb 225 276

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N 0.820
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N 0.820
mgf007985m Mimulus guttatus mgf007985m N 0.805
mgf007532m Mimulus guttatus mgf007532m N 0.805
MDP0000184307 Malus domestica MDP0000184307 N 0.793
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N 0.793
MDP0000253656 Malus domestica MDP0000253656 N 0.793
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N 0.790
VIT_08s0007g06310 Vitis vinifera VIT_08s0007g06310 I 0.786
GSMUA_Achr7G06370_001 Musa acuminata GSMUA_Achr7G06370_001 I 0.780
VIT_13s0156g00390 Vitis vinifera VIT_13s0156g00390 I 0.775
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N 0.772
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N 0.772
Bo2g007410 Brassica oleracea Bo2g007410 N 0.772
Cla011853 Citrullus lanatus Cla011853 N 0.772
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N 0.772
28582.m000316 Ricinus communis 28582.m000316 N 0.772
Cucsa.353890 Cucumis sativus Cucsa.353890 N 0.772
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N 0.772
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N 0.772
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N 0.772
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N 0.772
Lus10021035.g Linum usitatissimum Lus10021035.g N 0.772
Bra028717 Brassica rapa Bra028717 N 0.772
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N 0.772
cassava39743.m1 Manihot esculenta cassava39743.m1 N 0.772
TCM_024886 Theobroma cacao TCM_024886 N 0.772
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N 0.772
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N 0.772
Lus10023816.g Linum usitatissimum Lus10023816.g N 0.770
cassava16780.m1 Manihot esculenta cassava16780.m1 I 0.768
Bo3g004040 Brassica oleracea Bo3g004040 N 0.766
Bra005912 Brassica rapa Bra005912 N 0.766
Ca_14198 Cicer arietinum Ca_14198 N 0.763
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N 0.763
MTR_1g053835 Medicago truncatula MTR_1g053835 N 0.763
GLYMA09G17404 Glycine max GLYMA09G17404 N 0.763
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N 0.760
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N 0.760
Ciclev10033388m.g Citrus clementina Ciclev10033388m.g N 0.760
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N 0.760
GSMUA_Achr4G19300_001 Musa acuminata GSMUA_Achr4G19300_001 I 0.758
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N 0.756
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N 0.756
Pm025973 Prunus mume Pm025973 N 0.754
AT5G06800 Arabidopsis thaliana AT5G06800 N 0.754
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N 0.754
PK00827.1 Cannabis sativa PK00827.1 N 0.750
MDP0000280005 Malus domestica MDP0000280005 N 0.748
SapurV1A.0008s0360 Salix purpurea SapurV1A.0008s0360 N 0.744
SapurV1A.4156s0010 Salix purpurea SapurV1A.4156s0010 N 0.744
mgf017208m Mimulus guttatus mgf017208m N 0.742
PDK_20s1349221g001 Phoenix dactylifera PDK_20s1349221g001 N 0.737
VIT_13s0156g00370 Vitis vinifera VIT_13s0156g00370 N 0.733
cassava12253.valid.m1 Manihot esculenta cassava12253.valid.m1 N 0.731
chr1.LjB18K24.110.nd Lotus japonicus chr1.LjB18K24.110.nd I 0.730
POPTR_0001s23560 Populus trichocarpa POPTR_0001s23560 N 0.729
GLYMA02G30800 Glycine max GLYMA02G30800 N 0.724
MTR_7g093030 Medicago truncatula MTR_7g093030 N 0.719
GLYMA19G32850 Glycine max GLYMA19G32850 I 0.719
GLYMA03G29940 Glycine max GLYMA03G29940 I 0.719
VIT_08s0007g06180 Vitis vinifera VIT_08s0007g06180 I 0.716
Bra009228 Brassica rapa Bra009228 I 0.712
Carubv10003217m.g Capsella rubella Carubv10003217m.g N 0.712
Bo9g175820 Brassica oleracea Bo9g175820 I 0.712
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N 0.712
chr5.LjT42I01.50.nd Lotus japonicus chr5.LjT42I01.50.nd I 0.703
AMTR_s00022p00190540 Amborella trichopoda AMTR_s00022p00190540 I 0.701
LPERR04G24240 Leersia perrieri LPERR04G24240 I 0.699
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I 0.699
OS04G0665600 Oryza sativa OS04G0665600 I 0.699
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I 0.699
Sb06g031970 Sorghum bicolor Sb06g031970 I 0.699
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I 0.699
Si022099m.g Setaria italica Si022099m.g I 0.699
BGIOSGA014151 Oryza indica BGIOSGA014151 I 0.699
GRMZM2G124495 Zea mays GRMZM2G124495 I 0.699
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I 0.699
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I 0.699
OLONG_005000 Oryza longistaminata OLONG_005000 I 0.699
OMERI04G24260 Oryza meridionalis OMERI04G24260 I 0.699
OPUNC04G26200 Oryza punctata OPUNC04G26200 I 0.699
ONIVA04G27220 Oryza nivara ONIVA04G27220 I 0.699
OB04G35670 Oryza brachyantha OB04G35670 I 0.699
OBART04G28680 Oryza barthii OBART04G28680 I 0.699
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.691
GLYMA18G43130 Glycine max GLYMA18G43130 I 0.690
Pavir.J05593 Panicum virgatum Pavir.J05593 I 0.688
mgf015795m Mimulus guttatus mgf015795m N 0.682
MDP0000182154 Malus domestica MDP0000182154 I 0.679
MDP0000142146 Malus domestica MDP0000142146 I 0.679
orange1.1g025728m.g Citrus sinensis orange1.1g025728m.g I 0.677
TCM_021688 Theobroma cacao TCM_021688 I 0.677
Lus10004809.g Linum usitatissimum Lus10004809.g I 0.677
Lus10005036.g Linum usitatissimum Lus10005036.g I 0.677
Ciclev10013453m.g Citrus clementina Ciclev10013453m.g I 0.677
Lus10027806.g Linum usitatissimum Lus10027806.g I 0.677
Solyc10g080460.1 Solanum lycopersicum Solyc10g080460.1 N 0.673
PGSC0003DMG400023674 Solanum tuberosum PGSC0003DMG400023674 N 0.673
Pavir.J33581 Panicum virgatum Pavir.J33581 I 0.672
Si039234m.g Setaria italica Si039234m.g I 0.672
Gorai.006G182800 Gossypium raimondii Gorai.006G182800 I 0.670
POPTR_0006s10190 Populus trichocarpa POPTR_0006s10190 I 0.669
POPTR_0016s12430 Populus trichocarpa POPTR_0016s12430 I 0.669
evm.TU.contig_34762 Carica papaya evm.TU.contig_34762 I 0.669
mgf023762m Mimulus guttatus mgf023762m I 0.667
Lus10002483.g Linum usitatissimum Lus10002483.g I 0.666
MLOC_52271 Hordeum vulgare MLOC_52271 I 0.665
EuGene.0700010469 Micromonas sp RCC299 EuGene.0700010469 I 0.663