CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30226.m001993
(
Ricinus communis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
30226.m001993
T283927_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30226.m001993
Myb
225
276
RIKWTQDLHKRFVECVDRLGGAEKATPKLILKLMGVQGLTIFHVKSHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Ricinus communis
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400011435
Solanum tuberosum
PGSC0003DMG400011435
N
0.820
Solyc10g078720.1
Solanum lycopersicum
Solyc10g078720.1
N
0.820
mgf007985m
Mimulus guttatus
mgf007985m
N
0.805
mgf007532m
Mimulus guttatus
mgf007532m
N
0.805
MDP0000184307
Malus domestica
MDP0000184307
N
0.793
gene22647-v1.0-hybrid
Fragaria vesca
gene22647-v1.0-hybrid
N
0.793
MDP0000253656
Malus domestica
MDP0000253656
N
0.793
POPTR_0016s04830
Populus trichocarpa
POPTR_0016s04830
N
0.790
VIT_08s0007g06310
Vitis vinifera
VIT_08s0007g06310
I
0.786
GSMUA_Achr7G06370_001
Musa acuminata
GSMUA_Achr7G06370_001
I
0.780
VIT_13s0156g00390
Vitis vinifera
VIT_13s0156g00390
I
0.775
Bostr.13129s0292
Boechera stricta
Bostr.13129s0292
N
0.772
Ciclev10012014m.g
Citrus clementina
Ciclev10012014m.g
N
0.772
Bo2g007410
Brassica oleracea
Bo2g007410
N
0.772
Cla011853
Citrullus lanatus
Cla011853
N
0.772
cassava12255.valid.m1
Manihot esculenta
cassava12255.valid.m1
N
0.772
28582.m000316
Ricinus communis
28582.m000316
N
0.772
Cucsa.353890
Cucumis sativus
Cucsa.353890
N
0.772
Thhalv10013850m.g
Eutrema salsugineum
Thhalv10013850m.g
N
0.772
SapurV1A.0251s0040
Salix purpurea
SapurV1A.0251s0040
N
0.772
fgenesh2_kg.6__627__AT5G06800.1
Arabidopsis lyrata
fgenesh2_kg.6__627__AT5G06800.1
N
0.772
SapurV1A.0018s0530
Salix purpurea
SapurV1A.0018s0530
N
0.772
Lus10021035.g
Linum usitatissimum
Lus10021035.g
N
0.772
Bra028717
Brassica rapa
Bra028717
N
0.772
orange1.1g018583m.g
Citrus sinensis
orange1.1g018583m.g
N
0.772
cassava39743.m1
Manihot esculenta
cassava39743.m1
N
0.772
TCM_024886
Theobroma cacao
TCM_024886
N
0.772
cassava12254.valid.m1
Manihot esculenta
cassava12254.valid.m1
N
0.772
Gorai.002G225400
Gossypium raimondii
Gorai.002G225400
N
0.772
Lus10023816.g
Linum usitatissimum
Lus10023816.g
N
0.770
cassava16780.m1
Manihot esculenta
cassava16780.m1
I
0.768
Bo3g004040
Brassica oleracea
Bo3g004040
N
0.766
Bra005912
Brassica rapa
Bra005912
N
0.766
Ca_14198
Cicer arietinum
Ca_14198
N
0.763
POPTR_0006s20540
Populus trichocarpa
POPTR_0006s20540
N
0.763
MTR_1g053835
Medicago truncatula
MTR_1g053835
N
0.763
GLYMA09G17404
Glycine max
GLYMA09G17404
N
0.763
orange1.1g035950m.g
Citrus sinensis
orange1.1g035950m.g
N
0.760
Aquca_009_00165
Aquilegia coerulea
Aquca_009_00165
N
0.760
Ciclev10033388m.g
Citrus clementina
Ciclev10033388m.g
N
0.760
Aquca_012_00204
Aquilegia coerulea
Aquca_012_00204
N
0.760
GSMUA_Achr4G19300_001
Musa acuminata
GSMUA_Achr4G19300_001
I
0.758
evm.TU.supercontig_85.82
Carica papaya
evm.TU.supercontig_85.82
N
0.756
Gorai.006G142000
Gossypium raimondii
Gorai.006G142000
N
0.756
Pm025973
Prunus mume
Pm025973
N
0.754
AT5G06800
Arabidopsis thaliana
AT5G06800
N
0.754
PRUPE_ppa016067mg
Prunus persica
PRUPE_ppa016067mg
N
0.754
PK00827.1
Cannabis sativa
PK00827.1
N
0.750
MDP0000280005
Malus domestica
MDP0000280005
N
0.748
SapurV1A.0008s0360
Salix purpurea
SapurV1A.0008s0360
N
0.744
SapurV1A.4156s0010
Salix purpurea
SapurV1A.4156s0010
N
0.744
mgf017208m
Mimulus guttatus
mgf017208m
N
0.742
PDK_20s1349221g001
Phoenix dactylifera
PDK_20s1349221g001
N
0.737
VIT_13s0156g00370
Vitis vinifera
VIT_13s0156g00370
N
0.733
cassava12253.valid.m1
Manihot esculenta
cassava12253.valid.m1
N
0.731
chr1.LjB18K24.110.nd
Lotus japonicus
chr1.LjB18K24.110.nd
I
0.730
POPTR_0001s23560
Populus trichocarpa
POPTR_0001s23560
N
0.729
GLYMA02G30800
Glycine max
GLYMA02G30800
N
0.724
MTR_7g093030
Medicago truncatula
MTR_7g093030
N
0.719
GLYMA19G32850
Glycine max
GLYMA19G32850
I
0.719
GLYMA03G29940
Glycine max
GLYMA03G29940
I
0.719
VIT_08s0007g06180
Vitis vinifera
VIT_08s0007g06180
I
0.716
Bra009228
Brassica rapa
Bra009228
I
0.712
Carubv10003217m.g
Capsella rubella
Carubv10003217m.g
N
0.712
Bo9g175820
Brassica oleracea
Bo9g175820
I
0.712
Cagra.8005s0016
Capsella grandiflora
Cagra.8005s0016
N
0.712
chr5.LjT42I01.50.nd
Lotus japonicus
chr5.LjT42I01.50.nd
I
0.703
AMTR_s00022p00190540
Amborella trichopoda
AMTR_s00022p00190540
I
0.701
LPERR04G24240
Leersia perrieri
LPERR04G24240
I
0.699
ORUFI04G30350
Oryza rufipogon
ORUFI04G30350
I
0.699
OS04G0665600
Oryza sativa
OS04G0665600
I
0.699
ORGLA04G0249600
Oryza glaberrima
ORGLA04G0249600
I
0.699
Sb06g031970
Sorghum bicolor
Sb06g031970
I
0.699
BRADI5G25320
Brachypodium distachyon
BRADI5G25320
I
0.699
Si022099m.g
Setaria italica
Si022099m.g
I
0.699
BGIOSGA014151
Oryza indica
BGIOSGA014151
I
0.699
GRMZM2G124495
Zea mays
GRMZM2G124495
I
0.699
Pavir.Ga00160
Panicum virgatum
Pavir.Ga00160
I
0.699
OGLUM04G28560
Oryza glumaepatula
OGLUM04G28560
I
0.699
OLONG_005000
Oryza longistaminata
OLONG_005000
I
0.699
OMERI04G24260
Oryza meridionalis
OMERI04G24260
I
0.699
OPUNC04G26200
Oryza punctata
OPUNC04G26200
I
0.699
ONIVA04G27220
Oryza nivara
ONIVA04G27220
I
0.699
OB04G35670
Oryza brachyantha
OB04G35670
I
0.699
OBART04G28680
Oryza barthii
OBART04G28680
I
0.699
Eucgr.A02444
Eucalyptus grandis
Eucgr.A02444
N
0.691
GLYMA18G43130
Glycine max
GLYMA18G43130
I
0.690
Pavir.J05593
Panicum virgatum
Pavir.J05593
I
0.688
mgf015795m
Mimulus guttatus
mgf015795m
N
0.682
MDP0000182154
Malus domestica
MDP0000182154
I
0.679
MDP0000142146
Malus domestica
MDP0000142146
I
0.679
orange1.1g025728m.g
Citrus sinensis
orange1.1g025728m.g
I
0.677
TCM_021688
Theobroma cacao
TCM_021688
I
0.677
Lus10004809.g
Linum usitatissimum
Lus10004809.g
I
0.677
Lus10005036.g
Linum usitatissimum
Lus10005036.g
I
0.677
Ciclev10013453m.g
Citrus clementina
Ciclev10013453m.g
I
0.677
Lus10027806.g
Linum usitatissimum
Lus10027806.g
I
0.677
Solyc10g080460.1
Solanum lycopersicum
Solyc10g080460.1
N
0.673
PGSC0003DMG400023674
Solanum tuberosum
PGSC0003DMG400023674
N
0.673
Pavir.J33581
Panicum virgatum
Pavir.J33581
I
0.672
Si039234m.g
Setaria italica
Si039234m.g
I
0.672
Gorai.006G182800
Gossypium raimondii
Gorai.006G182800
I
0.670
POPTR_0006s10190
Populus trichocarpa
POPTR_0006s10190
I
0.669
POPTR_0016s12430
Populus trichocarpa
POPTR_0016s12430
I
0.669
evm.TU.contig_34762
Carica papaya
evm.TU.contig_34762
I
0.669
mgf023762m
Mimulus guttatus
mgf023762m
I
0.667
Lus10002483.g
Linum usitatissimum
Lus10002483.g
I
0.666
MLOC_52271
Hordeum vulgare
MLOC_52271
I
0.665
EuGene.0700010469
Micromonas sp RCC299
EuGene.0700010469
I
0.663