AT5G06800 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT5G06800 T266521_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G06800.1 Myb 194 245
AT5G06800.2 Myb 194 245
AT5G06800.3 Myb 194 245

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava39743.m1 Manihot esculenta cassava39743.m1 N 0.891
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N 0.891
Cucsa.353890 Cucumis sativus Cucsa.353890 N 0.891
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N 0.891
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N 0.891
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N 0.891
Lus10021035.g Linum usitatissimum Lus10021035.g N 0.891
Bra028717 Brassica rapa Bra028717 N 0.891
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N 0.891
Bo2g007410 Brassica oleracea Bo2g007410 N 0.891
Cla011853 Citrullus lanatus Cla011853 N 0.891
28582.m000316 Ricinus communis 28582.m000316 N 0.891
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N 0.891
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N 0.891
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N 0.891
Lus10023816.g Linum usitatissimum Lus10023816.g N 0.890
GLYMA09G17404 Glycine max GLYMA09G17404 N 0.883
MTR_1g053835 Medicago truncatula MTR_1g053835 N 0.883
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N 0.883
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N 0.876
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N 0.876
TCM_024886 Theobroma cacao TCM_024886 N 0.873
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N 0.873
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N 0.873
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N 0.873
Bra005912 Brassica rapa Bra005912 N 0.867
Bo3g004040 Brassica oleracea Bo3g004040 N 0.867
MTR_7g093030 Medicago truncatula MTR_7g093030 N 0.857
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N 0.852
MDP0000184307 Malus domestica MDP0000184307 N 0.852
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N 0.852
MDP0000253656 Malus domestica MDP0000253656 N 0.852
Pm025973 Prunus mume Pm025973 N 0.852
MDP0000280005 Malus domestica MDP0000280005 N 0.845
Ca_14198 Cicer arietinum Ca_14198 N 0.843
GLYMA02G30800 Glycine max GLYMA02G30800 N 0.843
Carubv10003217m.g Capsella rubella Carubv10003217m.g N 0.831
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N 0.831
Bo9g175820 Brassica oleracea Bo9g175820 I 0.831
PK00827.1 Cannabis sativa PK00827.1 N 0.830
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N 0.824
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N 0.824
GLYMA03G29940 Glycine max GLYMA03G29940 I 0.817
GLYMA19G32850 Glycine max GLYMA19G32850 I 0.817
Bra009228 Brassica rapa Bra009228 I 0.813
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.810
VIT_08s0007g06310 Vitis vinifera VIT_08s0007g06310 I 0.808
chr1.LjT38A19.30.nc Lotus japonicus chr1.LjT38A19.30.nc N 0.795
VIT_08s0007g06180 Vitis vinifera VIT_08s0007g06180 I 0.786
chr5.LjT42I01.50.nd Lotus japonicus chr5.LjT42I01.50.nd I 0.783
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N 0.782
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N 0.782
mgf007532m Mimulus guttatus mgf007532m N 0.769
mgf007985m Mimulus guttatus mgf007985m N 0.769
Ciclev10033388m.g Citrus clementina Ciclev10033388m.g N 0.764
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N 0.764
GSMUA_Achr7G06370_001 Musa acuminata GSMUA_Achr7G06370_001 I 0.762
mgf017208m Mimulus guttatus mgf017208m N 0.760
AMTR_s00022p00190540 Amborella trichopoda AMTR_s00022p00190540 I 0.760
Ca_07304 Cicer arietinum Ca_07304 I 0.756
30226.m001993 Ricinus communis 30226.m001993 N 0.754
28582.m000318 Ricinus communis 28582.m000318 N 0.751
SapurV1A.4156s0010 Salix purpurea SapurV1A.4156s0010 N 0.747
SapurV1A.0008s0360 Salix purpurea SapurV1A.0008s0360 N 0.747
GSMUA_Achr4G19300_001 Musa acuminata GSMUA_Achr4G19300_001 I 0.740
28582.m000317 Ricinus communis 28582.m000317 N 0.732
POPTR_0001s23560 Populus trichocarpa POPTR_0001s23560 N 0.732
cassava12253.valid.m1 Manihot esculenta cassava12253.valid.m1 N 0.731
MTR_7g068600 Medicago truncatula MTR_7g068600 N 0.688
PDK_20s1349221g001 Phoenix dactylifera PDK_20s1349221g001 N 0.688
AMTR_s00025p00224230 Amborella trichopoda AMTR_s00025p00224230 I 0.685
VIT_13s0156g00390 Vitis vinifera VIT_13s0156g00390 I 0.682
ONIVA04G27220 Oryza nivara ONIVA04G27220 I 0.681
Si022099m.g Setaria italica Si022099m.g I 0.681
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I 0.681
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I 0.681
BGIOSGA014151 Oryza indica BGIOSGA014151 I 0.681
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I 0.681
OLONG_005000 Oryza longistaminata OLONG_005000 I 0.681
GRMZM2G124495 Zea mays GRMZM2G124495 I 0.681
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I 0.681
OPUNC04G26200 Oryza punctata OPUNC04G26200 I 0.681
OB04G35670 Oryza brachyantha OB04G35670 I 0.681
OBART04G28680 Oryza barthii OBART04G28680 I 0.681
LPERR04G24240 Leersia perrieri LPERR04G24240 I 0.681
OS04G0665600 Oryza sativa OS04G0665600 I 0.681
OMERI04G24260 Oryza meridionalis OMERI04G24260 I 0.681
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I 0.681
Sb06g031970 Sorghum bicolor Sb06g031970 I 0.681
MDP0000182154 Malus domestica MDP0000182154 I 0.679
MDP0000142146 Malus domestica MDP0000142146 I 0.679
PGSC0003DMG400023674 Solanum tuberosum PGSC0003DMG400023674 N 0.677
Solyc10g080460.1 Solanum lycopersicum Solyc10g080460.1 N 0.677
cassava16780.m1 Manihot esculenta cassava16780.m1 I 0.675
chr1.LjB18K24.110.nd Lotus japonicus chr1.LjB18K24.110.nd I 0.672
GLYMA18G43130 Glycine max GLYMA18G43130 I 0.672
Aquca_004_00369 Aquilegia coerulea Aquca_004_00369 I 0.672
Lus10022886.g Linum usitatissimum Lus10022886.g I 0.670
Pavir.J05593 Panicum virgatum Pavir.J05593 I 0.670