VIT_08s0007g06180 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_08s0007g06180 T281973_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G20400
M07046_2.00 		Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB
VGAATATKCYWTDNNNHHHBNNDNHNNHN		 Dap-seq
OMalley et al.(2016)
AT2G20400_col_a 		0.663 0.745
AT2G20400
M07047_2.00 		Arabidopsis thaliana
RDRGAATATTCBNWD
HWNVGAATATTCYHY		 Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a 		0.663 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_08s0007g06180.t01 Myb 114 165

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_08s0007g06310 Vitis vinifera VIT_08s0007g06310 I 0.838
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N 0.804
cassava39743.m1 Manihot esculenta cassava39743.m1 N 0.804
Cucsa.353890 Cucumis sativus Cucsa.353890 N 0.804
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N 0.804
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N 0.804
28582.m000316 Ricinus communis 28582.m000316 N 0.804
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N 0.804
Cla011853 Citrullus lanatus Cla011853 N 0.804
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N 0.804
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N 0.804
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N 0.804
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N 0.804
Bra028717 Brassica rapa Bra028717 N 0.804
Lus10021035.g Linum usitatissimum Lus10021035.g N 0.804
Bo2g007410 Brassica oleracea Bo2g007410 N 0.804
Lus10023816.g Linum usitatissimum Lus10023816.g N 0.803
MTR_1g053835 Medicago truncatula MTR_1g053835 N 0.796
GLYMA09G17404 Glycine max GLYMA09G17404 N 0.796
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N 0.796
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N 0.789
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N 0.789
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N 0.786
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N 0.786
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N 0.786
MTR_7g093030 Medicago truncatula MTR_7g093030 N 0.786
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N 0.786
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N 0.786
AT5G06800 Arabidopsis thaliana AT5G06800 N 0.786
TCM_024886 Theobroma cacao TCM_024886 N 0.786
Bo3g004040 Brassica oleracea Bo3g004040 N 0.780
Bra005912 Brassica rapa Bra005912 N 0.780
GLYMA02G30800 Glycine max GLYMA02G30800 N 0.756
Ca_14198 Cicer arietinum Ca_14198 N 0.756
MDP0000253656 Malus domestica MDP0000253656 N 0.747
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N 0.747
MDP0000184307 Malus domestica MDP0000184307 N 0.747
Pm025973 Prunus mume Pm025973 N 0.747
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N 0.747
GLYMA03G29940 Glycine max GLYMA03G29940 I 0.747
GLYMA19G32850 Glycine max GLYMA19G32850 I 0.747
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N 0.744
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N 0.744
Carubv10003217m.g Capsella rubella Carubv10003217m.g N 0.744
Bo9g175820 Brassica oleracea Bo9g175820 I 0.744
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N 0.744
PK00827.1 Cannabis sativa PK00827.1 N 0.743
MDP0000280005 Malus domestica MDP0000280005 N 0.741
mgf007532m Mimulus guttatus mgf007532m N 0.731
mgf007985m Mimulus guttatus mgf007985m N 0.731
Bra009228 Brassica rapa Bra009228 I 0.726
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N 0.726
Ciclev10033388m.g Citrus clementina Ciclev10033388m.g N 0.726
SapurV1A.0008s0360 Salix purpurea SapurV1A.0008s0360 N 0.725
SapurV1A.4156s0010 Salix purpurea SapurV1A.4156s0010 N 0.725
chr1.LjT38A19.30.nc Lotus japonicus chr1.LjT38A19.30.nc N 0.725
GSMUA_Achr7G06370_001 Musa acuminata GSMUA_Achr7G06370_001 I 0.724
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.723
30226.m001993 Ricinus communis 30226.m001993 N 0.716
AMTR_s00025p00224230 Amborella trichopoda AMTR_s00025p00224230 I 0.715
mgf017208m Mimulus guttatus mgf017208m N 0.707
GSMUA_Achr4G19300_001 Musa acuminata GSMUA_Achr4G19300_001 I 0.702
Lus10022886.g Linum usitatissimum Lus10022886.g I 0.700
chr5.LjT42I01.50.nd Lotus japonicus chr5.LjT42I01.50.nd I 0.696
MDP0000142146 Malus domestica MDP0000142146 I 0.691
MDP0000182154 Malus domestica MDP0000182154 I 0.691
Ciclev10004984m.g Citrus clementina Ciclev10004984m.g I 0.689
orange1.1g014308m.g Citrus sinensis orange1.1g014308m.g I 0.689
SELMODRAFT_426960 Selaginella moellendorffii SELMODRAFT_426960 I 0.688
SELMODRAFT_414222 Selaginella moellendorffii SELMODRAFT_414222 I 0.688
SELMODRAFT_422768 Selaginella moellendorffii SELMODRAFT_422768 I 0.688
estExt_fgenesh1_pg.C_550102 Physcomitrella patens estExt_fgenesh1_pg.C_550102 I 0.688
SELMODRAFT_438636 Selaginella moellendorffii SELMODRAFT_438636 I 0.688
Ca_07304 Cicer arietinum Ca_07304 I 0.685
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.682
28582.m000318 Ricinus communis 28582.m000318 N 0.680
Sb05g000480 Sorghum bicolor Sb05g000480 I 0.679
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I 0.679
MLOC_52271 Hordeum vulgare MLOC_52271 I 0.677
POPTR_0001s23560 Populus trichocarpa POPTR_0001s23560 N 0.676
est_orfs.1_306_4269596:1 Micromonas pusilla est_orfs.1_306_4269596:1 I 0.676
Solyc10g080460.1 Solanum lycopersicum Solyc10g080460.1 N 0.673
Ciclev10012556m.g Citrus clementina Ciclev10012556m.g N 0.673
PGSC0003DMG400023674 Solanum tuberosum PGSC0003DMG400023674 N 0.673
orange1.1g044722m.g Citrus sinensis orange1.1g044722m.g N 0.673
cassava16780.m1 Manihot esculenta cassava16780.m1 I 0.671
Gorai.010G181100 Gossypium raimondii Gorai.010G181100 I 0.670
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.670
orange1.1g020303m.g Citrus sinensis orange1.1g020303m.g I 0.666
PK23854.1 Cannabis sativa PK23854.1 I 0.666
SapurV1A.0203s0150 Salix purpurea SapurV1A.0203s0150 I 0.666
SapurV1A.0015s0960 Salix purpurea SapurV1A.0015s0960 I 0.666
cassava20298.m1 Manihot esculenta cassava20298.m1 I 0.666
TCM_011166 Theobroma cacao TCM_011166 I 0.666
VIT_01s0137g00050 Vitis vinifera VIT_01s0137g00050 I 0.666
SELMODRAFT_424890 Selaginella moellendorffii SELMODRAFT_424890 I 0.666
SELMODRAFT_423935 Selaginella moellendorffii SELMODRAFT_423935 I 0.666
GSMUA_Achr11G01510_001 Musa acuminata GSMUA_Achr11G01510_001 I 0.666
GSMUA_Achr2G11010_001 Musa acuminata GSMUA_Achr2G11010_001 I 0.666
Gorai.002G169300 Gossypium raimondii Gorai.002G169300 I 0.666
Cla017202 Citrullus lanatus Cla017202 I 0.666
Eucgr.B02627 Eucalyptus grandis Eucgr.B02627 I 0.666
evm.TU.supercontig_2.82 Carica papaya evm.TU.supercontig_2.82 I 0.666
29780.m001368 Ricinus communis 29780.m001368 I 0.666
Ciclev10005466m.g Citrus clementina Ciclev10005466m.g I 0.666
Aquca_002_01368 Aquilegia coerulea Aquca_002_01368 I 0.666
cassava27240.m1 Manihot esculenta cassava27240.m1 I 0.666
AT2G20400 Arabidopsis thaliana AT2G20400 D 0.663