MDP0000119446 (Malus domestica)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 MDP0000119446 T298378_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac071
M07219_2.00 		Arabidopsis thaliana
CTTSHNNYHCAMGYW
WRCKTGDRNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC071_col_a 		0.897 0.682
anac071
M07220_2.00 		Arabidopsis thaliana
CTTSHNNNNSAMGYA
TRCKTSNNNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC071_colamp_a 		0.897 0.682
anac096
M07237_2.00 		Arabidopsis thaliana
CTTSHNNNNBAMGHAAYC
GRTTDCKTVNNNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC096_colamp_a 		0.871 0.645
anac096
M07238_2.00 		Arabidopsis thaliana
TTNCTTSWNNHNYAMG
CKTRNDNNWSAAGNAA		 Dap-seq
OMalley et al.(2016)
ANAC096_col 		0.871 0.645
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000119446 NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Malus domestica TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000936269 Malus domestica MDP0000936269 I 0.923
Cagra.3356s0092 Capsella grandiflora Cagra.3356s0092 I 0.923
gene10722-v1.0-hybrid Fragaria vesca gene10722-v1.0-hybrid I 0.923
Cucsa.313350 Cucumis sativus Cucsa.313350 I 0.922
Cla016424 Citrullus lanatus Cla016424 I 0.922
Ca_02274 Cicer arietinum Ca_02274 I 0.921
PK00339.1 Cannabis sativa PK00339.1 I 0.921
cassava22941.valid.m1 Manihot esculenta cassava22941.valid.m1 I 0.920
POPTR_0003s08830 Populus trichocarpa POPTR_0003s08830 I 0.920
SapurV1A.0846s0080 Salix purpurea SapurV1A.0846s0080 I 0.919
MTR_5g014300 Medicago truncatula MTR_5g014300 I 0.917
Pm023277 Prunus mume Pm023277 I 0.917
PRUPE_ppa007828mg Prunus persica PRUPE_ppa007828mg I 0.917
Lus10035373.g Linum usitatissimum Lus10035373.g I 0.912
Lus10030978.g Linum usitatissimum Lus10030978.g I 0.911
orange1.1g018835m.g Citrus sinensis orange1.1g018835m.g I 0.911
Ciclev10031966m.g Citrus clementina Ciclev10031966m.g I 0.911
Bo7g105630 Brassica oleracea Bo7g105630 I 0.911
29827.m002555 Ricinus communis 29827.m002555 I 0.908
Carubv10007390m.g Capsella rubella Carubv10007390m.g I 0.908
Bostr.30275s0267 Boechera stricta Bostr.30275s0267 I 0.907
anac071 Arabidopsis lyrata Al_scaffold_0007_2395 I 0.906
Eucgr.E00298 Eucalyptus grandis Eucgr.E00298 I 0.906
POPTR_0001s02710 Populus trichocarpa POPTR_0001s02710 I 0.906
GLYMA05G23840 Glycine max GLYMA05G23840 I 0.905
GLYMA17G16500 Glycine max GLYMA17G16500 I 0.901
Eucgr.D02182 Eucalyptus grandis Eucgr.D02182 I 0.901
VIT_02s0012g01040 Vitis vinifera VIT_02s0012g01040 I 0.900
Bo2g130240 Brassica oleracea Bo2g130240 I 0.900
Gorai.008G227800 Gossypium raimondii Gorai.008G227800 I 0.899
evm.TU.supercontig_90.52 Carica papaya evm.TU.supercontig_90.52 I 0.899
SapurV1A.0900s0060 Salix purpurea SapurV1A.0900s0060 I 0.899
Gorai.003G180600 Gossypium raimondii Gorai.003G180600 I 0.898
Bra012626 Brassica rapa Bra012626 I 0.898
anac071 Arabidopsis thaliana AT4G17980 D 0.897
Solyc08g077110.2 Solanum lycopersicum Solyc08g077110.2 I 0.896
Ca_12837 Cicer arietinum Ca_12837 I 0.894
Carubv10028284m.g Capsella rubella Carubv10028284m.g I 0.893
Cagra.0569s0030 Capsella grandiflora Cagra.0569s0030 I 0.893
Gorai.004G186700 Gossypium raimondii Gorai.004G186700 I 0.893
Bo1g019130 Brassica oleracea Bo1g019130 I 0.893
Bra013272 Brassica rapa Bra013272 I 0.893
Bo7g075540 Brassica oleracea Bo7g075540 I 0.891
Thhalv10001200m.g Eutrema salsugineum Thhalv10001200m.g I 0.891
Bra025012 Brassica rapa Bra025012 I 0.891
anac096 Arabidopsis lyrata fgenesh2_kg.8__135__AT5G46590.1 I 0.891
Bra022046 Brassica rapa Bra022046 I 0.890
TCM_015749 Theobroma cacao TCM_015749 I 0.889
PGSC0003DMG400017505 Solanum tuberosum PGSC0003DMG400017505 I 0.887
Gorai.007G031300 Gossypium raimondii Gorai.007G031300 I 0.886
Pavir.Ia03491 Panicum virgatum Pavir.Ia03491 I 0.884
Si036301m.g Setaria italica Si036301m.g I 0.884
Sb01g028450 Sorghum bicolor Sb01g028450 I 0.884
OGLUM10G19330 Oryza glumaepatula OGLUM10G19330 I 0.880
OBART10G19230 Oryza barthii OBART10G19230 I 0.880
BGIOSGA033482 Oryza indica BGIOSGA033482 I 0.880
OMERI07G08100 Oryza meridionalis OMERI07G08100 I 0.880
OLONG_018722 Oryza longistaminata OLONG_018722 I 0.880
ONIVA10G21790 Oryza nivara ONIVA10G21790 I 0.880
ORGLA10G0144100 Oryza glaberrima ORGLA10G0144100 I 0.880
OPUNC10G17630 Oryza punctata OPUNC10G17630 I 0.880
ORUFI10G20470 Oryza rufipogon ORUFI10G20470 I 0.880
GRMZM2G082709 Zea mays GRMZM2G082709 I 0.879
OB10G26350 Oryza brachyantha OB10G26350 I 0.879
LPERR10G15090 Leersia perrieri LPERR10G15090 I 0.876
BRADI3G33957 Brachypodium distachyon BRADI3G33957 I 0.873
anac096 Arabidopsis thaliana AT5G46590 D 0.871
Traes_1DL_A556D8590 Triticum aestivum Traes_1DL_A556D8590 N 0.871