gene10722-v1.0-hybrid (Fragaria vesca)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 gene10722-v1.0-hybrid T297933_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac071
M07219_2.00 		Arabidopsis thaliana
CTTSHNNYHCAMGYW
WRCKTGDRNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC071_col_a 		0.934 0.880
anac071
M07220_2.00 		Arabidopsis thaliana
CTTSHNNNNSAMGYA
TRCKTSNNNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC071_colamp_a 		0.934 0.880
anac096
M07237_2.00 		Arabidopsis thaliana
CTTSHNNNNBAMGHAAYC
GRTTDCKTVNNNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC096_colamp_a 		0.932 0.815
anac096
M07238_2.00 		Arabidopsis thaliana
TTNCTTSWNNHNYAMG
CKTRNDNNWSAAGNAA		 Dap-seq
OMalley et al.(2016)
ANAC096_col 		0.932 0.815
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna10722.1-v1.0-hybrid NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Fragaria vesca TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000936269 Malus domestica MDP0000936269 I 0.969
POPTR_0003s08830 Populus trichocarpa POPTR_0003s08830 I 0.967
cassava22941.valid.m1 Manihot esculenta cassava22941.valid.m1 I 0.967
Pm023277 Prunus mume Pm023277 I 0.966
SapurV1A.0846s0080 Salix purpurea SapurV1A.0846s0080 I 0.966
PRUPE_ppa007828mg Prunus persica PRUPE_ppa007828mg I 0.966
Cucsa.313350 Cucumis sativus Cucsa.313350 I 0.965
PK00339.1 Cannabis sativa PK00339.1 I 0.965
Cla016424 Citrullus lanatus Cla016424 I 0.965
Ciclev10031966m.g Citrus clementina Ciclev10031966m.g I 0.963
orange1.1g018835m.g Citrus sinensis orange1.1g018835m.g I 0.963
Lus10035373.g Linum usitatissimum Lus10035373.g I 0.963
Lus10030978.g Linum usitatissimum Lus10030978.g I 0.962
29827.m002555 Ricinus communis 29827.m002555 I 0.962
POPTR_0001s02710 Populus trichocarpa POPTR_0001s02710 I 0.961
MTR_5g014300 Medicago truncatula MTR_5g014300 I 0.960
Gorai.008G227800 Gossypium raimondii Gorai.008G227800 I 0.959
Eucgr.D02182 Eucalyptus grandis Eucgr.D02182 I 0.958
Gorai.004G186700 Gossypium raimondii Gorai.004G186700 I 0.955
GLYMA05G23840 Glycine max GLYMA05G23840 I 0.955
SapurV1A.0900s0060 Salix purpurea SapurV1A.0900s0060 I 0.955
VIT_02s0012g01040 Vitis vinifera VIT_02s0012g01040 I 0.954
GLYMA17G16500 Glycine max GLYMA17G16500 I 0.954
Eucgr.E00298 Eucalyptus grandis Eucgr.E00298 I 0.953
Cagra.3356s0092 Capsella grandiflora Cagra.3356s0092 I 0.952
evm.TU.supercontig_90.52 Carica papaya evm.TU.supercontig_90.52 I 0.952
Solyc08g077110.2 Solanum lycopersicum Solyc08g077110.2 I 0.951
Ca_12837 Cicer arietinum Ca_12837 I 0.950
Bo7g075540 Brassica oleracea Bo7g075540 I 0.947
Bra025012 Brassica rapa Bra025012 I 0.947
PGSC0003DMG400017505 Solanum tuberosum PGSC0003DMG400017505 I 0.947
Thhalv10001200m.g Eutrema salsugineum Thhalv10001200m.g I 0.947
anac096 Arabidopsis lyrata fgenesh2_kg.8__135__AT5G46590.1 I 0.947
TCM_015749 Theobroma cacao TCM_015749 I 0.945
Bra022046 Brassica rapa Bra022046 I 0.945
Carubv10028284m.g Capsella rubella Carubv10028284m.g I 0.944
OB10G26350 Oryza brachyantha OB10G26350 I 0.944
Cagra.0569s0030 Capsella grandiflora Cagra.0569s0030 I 0.944
Ca_02274 Cicer arietinum Ca_02274 I 0.944
Carubv10007390m.g Capsella rubella Carubv10007390m.g I 0.942
Bostr.30275s0267 Boechera stricta Bostr.30275s0267 I 0.941
anac071 Arabidopsis lyrata Al_scaffold_0007_2395 I 0.941
OPUNC10G17630 Oryza punctata OPUNC10G17630 I 0.941
OMERI07G08100 Oryza meridionalis OMERI07G08100 I 0.941
OGLUM10G19330 Oryza glumaepatula OGLUM10G19330 I 0.941
OBART10G19230 Oryza barthii OBART10G19230 I 0.941
ONIVA10G21790 Oryza nivara ONIVA10G21790 I 0.941
OLONG_018722 Oryza longistaminata OLONG_018722 I 0.941
ORGLA10G0144100 Oryza glaberrima ORGLA10G0144100 I 0.941
ORUFI10G20470 Oryza rufipogon ORUFI10G20470 I 0.941
BGIOSGA033482 Oryza indica BGIOSGA033482 I 0.941
GSMUA_Achr5G03360_001 Musa acuminata GSMUA_Achr5G03360_001 I 0.940
BRADI3G33957 Brachypodium distachyon BRADI3G33957 I 0.940
Gorai.007G031300 Gossypium raimondii Gorai.007G031300 I 0.939
LPERR10G15090 Leersia perrieri LPERR10G15090 I 0.939
Gorai.003G180600 Gossypium raimondii Gorai.003G180600 I 0.938
Pavir.Ia03491 Panicum virgatum Pavir.Ia03491 I 0.938
Sb01g028450 Sorghum bicolor Sb01g028450 I 0.938
Si036301m.g Setaria italica Si036301m.g I 0.938
Bo1g019130 Brassica oleracea Bo1g019130 I 0.937
Bra013272 Brassica rapa Bra013272 I 0.937
Bo7g105630 Brassica oleracea Bo7g105630 I 0.936
GRMZM2G082709 Zea mays GRMZM2G082709 I 0.935
anac071 Arabidopsis thaliana AT4G17980 D 0.934
Bo2g130240 Brassica oleracea Bo2g130240 I 0.934
Bra012626 Brassica rapa Bra012626 I 0.934
AMTR_s00149p00068500 Amborella trichopoda AMTR_s00149p00068500 I 0.933
anac096 Arabidopsis thaliana AT5G46590 D 0.932
Traes_1AL_D6C49C3BC Triticum aestivum Traes_1AL_D6C49C3BC I 0.931
F775_28577 Aegilops tauschii F775_28577 I 0.931
MLOC_58950 Hordeum vulgare MLOC_58950 I 0.931
Traes_1BL_8925B27BC Triticum aestivum Traes_1BL_8925B27BC I 0.931
Pavir.Ib02435 Panicum virgatum Pavir.Ib02435 I 0.924
chr2.CM0021.650.nc Lotus japonicus chr2.CM0021.650.nc I 0.924
MDP0000119446 Malus domestica MDP0000119446 I 0.923
TRIUR3_22131 Triticum urartu TRIUR3_22131 I 0.919
MTR_4g098630 Medicago truncatula MTR_4g098630 I 0.918
Solyc06g061080.2 Solanum lycopersicum Solyc06g061080.2 I 0.916
Aquca_044_00122 Aquilegia coerulea Aquca_044_00122 I 0.907
Thhalv10027064m.g Eutrema salsugineum Thhalv10027064m.g I 0.904
Bostr.4485s0006 Boechera stricta Bostr.4485s0006 I 0.902
GSMUA_Achr11G17780_001 Musa acuminata GSMUA_Achr11G17780_001 I 0.899
mgf019012m Mimulus guttatus mgf019012m I 0.895
Bo2g052630 Brassica oleracea Bo2g052630 I 0.876
Carubv10021788m.g Capsella rubella Carubv10021788m.g I 0.876
Cagra.11446s0003 Capsella grandiflora Cagra.11446s0003 I 0.876
Bra039745 Brassica rapa Bra039745 I 0.876
Bostr.26959s0323 Boechera stricta Bostr.26959s0323 I 0.876
Thhalv10018275m.g Eutrema salsugineum Thhalv10018275m.g I 0.876
PDK_20s1433691g002 Phoenix dactylifera PDK_20s1433691g002 I 0.871
Traes_1DL_A556D8590 Triticum aestivum Traes_1DL_A556D8590 N 0.871