GPUH_0000103801 (Gongylonema pulchrum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 GPUH_0000103801 T308695_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
EcR
M06414_2.00
Drosophila melanogaster
RAGGTCAW

WTGACCTY
B1H
Zhu et al.(2011)
EcR_SANGER_5_FBgn0000546
0.974 0.814
nr1h5.S
M11194_2.00
Xenopus laevis Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXRIR1_Q6
0.965 0.771
NR1H4
M00368_2.00
Homo sapiens
NVRGGTCANN

NNTGACCYBN
PBM
Barrera et al.(2016)
NR1H4_REF
0.948 0.757
NR1H4
M05876_2.00
Homo sapiens
DRGKTCAHHKD

HMDDTGAMCYH
SMiLE-seq
Isakova et al.(2017)
NR1H4
0.948 0.757
NR1H4
M08152_2.00
Homo sapiens
NNGGTCATTNN

NNAATGACCNN
ChIP-seq
Mathelier et al.(2014)
MA1110.1
0.948 0.757
NR1H4
M09263_2.00
Homo sapiens
CCBVNVGGYCRBTGMCCYB

VRGGKCAVYGRCCBNBVGG
Misc
Kulakovskiy et al.(2013)
NR1H4_HUMAN.H11MO.0.B
0.948 0.757
Nr1h4
M09332_2.00
Mus musculus
CCBVNVGGYCRBTGMCCYB

VRGGKCAVYGRCCBNBVGG
Misc
Kulakovskiy et al.(2013)
NR1H4_MOUSE.H11MO.0.A
0.948 0.757
Nr1h4
M09618_2.00
Mus musculus
NRGGBCANTGVCCY

RGGBCANTGVCCYN
Misc
Heinz et al.(2010)
Liver-FXR_Chong_et_al.
0.948 0.757
NR1H4
M11086_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q2
0.948 0.757
NR1H4
M11087_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q3
0.948 0.757
NR1H4
M11088_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q5
0.948 0.757
NR1H4
M11089_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXRRXR_Q5
0.948 0.757
NR1H4
M00367_2.00
Homo sapiens
NNNTWTTATDHNN

NNDHATAAWANNN
PBM
Barrera et al.(2016)
NR1H4_C144R
0.948 0.743
NR1H3
M09264_2.00
Homo sapiens
NHRRGGBHABHNNRGGNCA

TGNCCYNNDVTDVCCYYDN
Misc
Kulakovskiy et al.(2013)
NR1H3_HUMAN.H11MO.0.B
0.944 0.686
Nr1h3
M09301_2.00
Mus musculus
VDGDNCARAGKBCAN

NTGVMCTYTGNHCHB
Misc
Kulakovskiy et al.(2013)
NR1H3_MOUSE.H11MO.0.A
0.944 0.686
RORC
M05621_2.00
Homo sapiens
KRGGTCAYGMCCYM

KRGGKCRTGACCYM
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1
0.941 0.543
RORC
M05622_2.00
Homo sapiens
NAWNKRGGTYANTRGGTCAN

NTGACCYANTRACCYMNWTN
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2
0.941 0.543
RORC
M05880_2.00
Homo sapiens
NDAWNTRGGKCA

TGMCCYANWTHN
SMiLE-seq
Isakova et al.(2017)
RORc
0.941 0.543
RORC
M09282_2.00
Homo sapiens
NDAWSTRRGTCA

TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C
0.941 0.543
RORC
M05623_2.00
Homo sapiens
TRGGTCAYGACCYA

TRGGTCRTGACCYA
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1
0.941 0.543
RORC
M05624_2.00
Homo sapiens
NAWNTRGGTYASTAGGTCAN

NTGACCTASTRACCYANWTN
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2
0.941 0.543
Rora
M00819_2.00
Mus musculus
NNRGGTCA

TGACCYNN
PBM
Weirauch et al.(2013)
pTH3464
0.940 0.543
RORA
M03353_2.00
Homo sapiens
NMRAGGTCAAVYYVAGGTCA

TGACCTBRRBTTGACCTYKN
SELEX
Jolma et al.(2013)
RORA_1
0.940 0.543
RORA
M03354_2.00
Homo sapiens
WAWSTRGGTYASTAGGTCA

TGACCTASTRACCYASWTW
SELEX
Jolma et al.(2013)
RORA_2
0.940 0.543
RORA
M02705_2.00
Homo sapiens
WWVDAGGTCA

TGACCTHBWW
SELEX
Mathelier et al.(2014)
MA0071.1
0.940 0.543
RORA
M02706_2.00
Homo sapiens
NDWAWBTAGGTCAN

NTGACCTAVWTWHN
SELEX
Mathelier et al.(2014)
MA0072.1
0.940 0.543
RORA
M09265_2.00
Homo sapiens
VWNDRGGBCARDR

YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C
0.940 0.543
Rora
M09327_2.00
Mus musculus
VWNDRGGBCARDR

YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C
0.940 0.543
RORA
M11090_2.00
Homo sapiens
DWWWVDAGGTCAH

DTGACCTHBWWWH
Transfac
Matys et al.(2006)
V$RORA1_01
0.940 0.543
RORA
M11091_2.00
Homo sapiens
DWAWBTAGGTCAN

NTGACCTAVWTWH
Transfac
Matys et al.(2006)
V$RORA2_01
0.940 0.543
RORA
M11092_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORALPHA_Q4
0.940 0.543
RORA
M11093_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORA_Q4
0.940 0.543
Rorb
M00820_2.00
Mus musculus
NRGGTCANN

NNTGACCYN
PBM
Weirauch et al.(2013)
pTH3469
0.937 0.543
rorb
M02404_2.00
Tetraodon nigroviridis
NGAGGTCANN

NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6589
0.937 0.543
RORB
M05677_2.00
Homo sapiens
DAWNTRGGTYAGTRGGTCAN

NTGACCYACTRACCYANWTH
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1
0.937 0.543
RORB
M05678_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN

NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2
0.937 0.543
RORB
M05883_2.00
Homo sapiens
AWNBRGGTCAN

NTGACCYVNWT
SMiLE-seq
Isakova et al.(2017)
RORb
0.937 0.543
RORB
M11187_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORBETA_Q2
0.937 0.543
RORB
M05679_2.00
Homo sapiens
DAWBTRGGTYAGTRGGTCRN

NYGACCYACTRACCYAVWTH
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1
0.937 0.543
RORB
M05680_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN

NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2
0.937 0.543
Rorc
M09324_2.00
Mus musculus
NDAWSTRRGTCA

TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B
0.931 0.529
Rorc
M09617_2.00
Mus musculus
AWBTRGGTCA

TGACCYAVWT
Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019
0.931 0.529
RORC
M02405_2.00
Tetraodon nigroviridis
NGAGGTCANN

NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6612
0.926 0.529
nr2f2
M02393_2.00
Danio rerio
NNRGGTCAN

NTGACCYNN
PBM
Weirauch et al.(2014)
pTH5882
0.925 0.557
Nr2f1
M00822_2.00
Mus musculus
DRGGTCRN

NYGACCYH
PBM
Weirauch et al.(2013)
pTH3811
0.925 0.557
NR2F1
M03403_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_1
0.925 0.557
NR2F1
M03404_2.00
Homo sapiens
RRGGTCAARAGGTCAN

NTGACCTYTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_2
0.925 0.557
NR2F1
M03405_2.00
Homo sapiens
RRGGTCAN

NTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_3
0.925 0.557
NR2F1
M03406_2.00
Homo sapiens
NHRRGGTCANVNG

CNBNTGACCYYDN
SELEX
Jolma et al.(2013)
NR2F1_4
0.925 0.557
NR2F1
M05661_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1
0.925 0.557
NR2F1
M05662_2.00
Homo sapiens
VRGGTCANYGACCYY

RRGGTCRNTGACCYB
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2
0.925 0.557
NR2F1
M05665_2.00
Homo sapiens
VRGGTCAAAGGTCAN

NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1
0.925 0.557
NR2F1
M05666_2.00
Homo sapiens
RRGGTCANYGACCYY

RRGGTCRNTGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2
0.925 0.557
NR2F1
M09291_2.00
Homo sapiens
NRRRBSRRRGGKCANVN

NBNTGMCCYYYSVYYYN
Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C
0.925 0.557
Nr2f1
M09334_2.00
Mus musculus
YARAGGTCA

TGACCTYTR
Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B
0.925 0.557
NR2F1
M11172_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01
0.925 0.557
NR2F1
M05663_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1
0.925 0.557
NR2F1
M05664_2.00
Homo sapiens
NRGGTCANYGACCYH

DRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2
0.925 0.557
NR2F1
M05667_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1
0.925 0.557
NR2F1
M05668_2.00
Homo sapiens
RRGGTCRNYGACCYY

RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2
0.925 0.557
NR2F6
M02396_2.00
Homo sapiens
NNRGGTCR

YGACCYNN
PBM
Weirauch et al.(2014)
pTH6747
0.923 0.543
NR2F6
M03386_2.00
Homo sapiens
RRGGTCAAAAGGTCA

TGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_1
0.923 0.543
NR2F6
M03387_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_2
0.923 0.543
NR2F6
M03388_2.00
Homo sapiens
NRGGTCAAAGGTCA

TGACCTTTGACCYN
SELEX
Jolma et al.(2013)
NR2F6_3
0.923 0.543
NR2F6
M05641_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1
0.923 0.543
NR2F6
M05642_2.00
Homo sapiens
RAGGTCANTGACCTY

RAGGTCANTGACCTY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2
0.923 0.543
NR2F6
M05645_2.00
Homo sapiens
NRGGTCARAGGTCRN

NYGACCTYTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1
0.923 0.543
NR2F6
M05646_2.00
Homo sapiens
NRGGTCANYGACCYY

RRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2
0.923 0.543
NR2F6
M11153_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q2
0.923 0.543
NR2F6
M11154_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q4
0.923 0.543
NR2F6
M05643_2.00
Homo sapiens
RRGGTCAAAGGTCRN

NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1
0.923 0.543
NR2F6
M05644_2.00
Homo sapiens
RRGGTCRNYGACCYY

RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2
0.923 0.543
NR2F6
M05647_2.00
Homo sapiens
NRGGTYADRGGKBRN

NYVMCCYHTRACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1
0.923 0.543
NR2F6
M05648_2.00
Homo sapiens
NRGGTCANYGACCYN

NRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2
0.923 0.543
Nr2f2
M00184_2.00
Mus musculus
RRGGTCAN

NTGACCYY
PBM
Badis et al.(2009)
Nr2f2_2192
0.922 0.557
NR2F2
M08157_2.00
Homo sapiens
NNAAGGTCANN

NNTGACCTTNN
ChIP-seq
Mathelier et al.(2014)
MA1111.1
0.922 0.557
NR2F2
M08223_2.00
Homo sapiens
AAAGGTCA

TGACCTTT
ChIP-seq
Contrino et al.(2012)
Mv102
0.922 0.557
NR2F2
M08224_2.00
Homo sapiens
GGKCARAGGB

VCCTYTGMCC
ChIP-seq
Contrino et al.(2012)
Mv104
0.922 0.557
NR2F2
M09293_2.00
Homo sapiens
NARRGGTCADRDN

NHYHTGACCYYTN
Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A
0.922 0.557
Nr2f2
M09325_2.00
Mus musculus
NNHRAGGTCANVD

HBNTGACCTYDNN
Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A
0.922 0.557
NR2F2
M11180_2.00
Homo sapiens
WRRKKTCAARGGYTCA

TGARCCYTTGAMMYYW
Transfac
Matys et al.(2006)
V$ARP1_01
0.922 0.557
NR2F2
M11181_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF2_Q6
0.922 0.557
svp
M06423_2.00
Drosophila melanogaster
ARGGTCA

TGACCYK
B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651
0.921 0.557
Nr1h2
M09620_2.00
Mus musculus
RGGTYACTNNAGGTCA

TGACCTNNAGTRACCY
Misc
Heinz et al.(2010)
RAW-LXRb.biotin_GSE21512
0.918 0.657
Nr2c1
M00812_2.00
Mus musculus
NRRGGTCANN

NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH1284
0.903 0.543
Nr2c1
M02399_2.00
Mus musculus
RRGGTCAH

DTGACCYY
PBM
Weirauch et al.(2014)
pTH3466
0.903 0.543
NR2C1
M05597_2.00
Homo sapiens
NRGKKCRYGAMMYN

NRKKTCRYGMMCYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1
0.903 0.543
NR2C1
M05598_2.00
Homo sapiens
NRRGGTCAN

NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2
0.903 0.543
NR2C1
M09273_2.00
Homo sapiens
RBYVRVAGGTCAB

VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C
0.903 0.543
Nr2c1
M09304_2.00
Mus musculus
RBYVRVAGGTCAB

VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C
0.903 0.543
NR2C1
M05599_2.00
Homo sapiens
NRRGGTCAN

NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1
0.903 0.543
NR2C1
M05600_2.00
Homo sapiens
RRGGTCRYGACCYY

RRGGTCRYGACCYY
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2
0.903 0.543
AAEL009588
M02388_2.00
Aedes aegypti
NRGGTCR

YGACCYN
PBM
Weirauch et al.(2014)
pTH5508
0.900 0.514
Hr46
M02406_2.00
Drosophila melanogaster
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6142
0.900 0.514
Hr46
M03926_2.00
Drosophila melanogaster
RGGTCAGTRGGTCA

TGACCYACTGACCY
SELEX
Nitta et al.(2015)
Hr46_1
0.900 0.514
Hr46
M06412_2.00
Drosophila melanogaster
AWKTGGGTYW

WRACCCAMWT
B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448
0.900 0.514
Hr46
M06413_2.00
Drosophila melanogaster
HWNBAGGTCA

TGACCTVNWD
B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448
0.900 0.514
Q969A9_BOMMO
M02410_2.00
Bombyx mori
VRGGTCDN

NHGACCYB
PBM
Weirauch et al.(2014)
pTH5516
0.897 0.557
Nr2f6
M00811_2.00
Mus musculus
NRRGGTCANN

NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH2193
0.890 0.529
Nr2f6
M03419_2.00
Mus musculus
RAGGTCAADAGGTCA

TGACCTHTTGACCTY
SELEX
Jolma et al.(2013)
Nr2f6_1
0.890 0.529
Nr2f6
M03420_2.00
Mus musculus
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Nr2f6_2
0.890 0.529
Smp_105090
M02412_2.00
Schistosoma mansoni
RGGTCANN

NNTGACCY
PBM
Weirauch et al.(2014)
pTH6174
0.877 0.514
O77476_BRUPA
M02422_2.00
Brugia pahangi
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6019
0.873 0.543
NR2C2
M03407_2.00
Homo sapiens
VRGGTCAAAGGTCA

TGACCTTTGACCYB
SELEX
Jolma et al.(2013)
NR2C2_1
0.869 0.571
NR2C2
M05669_2.00
Homo sapiens
NRGGTCRN

NYGACCYN
SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX
0.869 0.571
NR2C2
M08156_2.00
Homo sapiens
NVRGGTCARAGGKCA

TGMCCTYTGACCYBN
ChIP-seq
Mathelier et al.(2014)
MA0504.1
0.869 0.571
NR2C2
M07990_2.00
Homo sapiens
WBYRCTTCCGGGKYV

BRMCCCGGAAGYRVW
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD
0.869 0.571
NR2C2
M07991_2.00
Homo sapiens
DWBYRCTTCCGGGKY

RMCCCGGAAGYRVWH
ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD
0.869 0.571
NR2C2
M07992_2.00
Homo sapiens
WBYRCTTCCGGGKYR

YRMCCCGGAAGYRVW
ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD
0.869 0.571
NR2C2
M08221_2.00
Homo sapiens
DWBYDCTTCCGGGKY

RMCCCGGAAGHRVWH
ChIP-seq
Contrino et al.(2012)
Mv97
0.869 0.571
NR2C2
M08222_2.00
Homo sapiens
TCARAGGTCA

TGACCTYTGA
ChIP-seq
Contrino et al.(2012)
Mv98
0.869 0.571
NR2C2
M09292_2.00
Homo sapiens
RBTYMVRGGTCR

YGACCYBKRAVY
Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B
0.869 0.571
Nr2c2
M09303_2.00
Mus musculus
RRGKSARAGGKCA

TGMCCTYTSMCYY
Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A
0.869 0.571
NR2C2
M09611_2.00
Homo sapiens
RRGGTCARAGGTCA

TGACCTYTGACCYY
Misc
Heinz et al.(2010)
Hela-TR4_GSE24685
0.869 0.571
NR2C2
M11173_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR2C2_03
0.869 0.571
NR2C2
M11174_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR2C2_04
0.869 0.571
NR2C2
M11175_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_01
0.869 0.571
NR2C2
M11176_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_03
0.869 0.571
NR2C2
M11177_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q2_01
0.869 0.571
NR2C2
M11178_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q2
0.869 0.571
NR2C2
M11179_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q3
0.869 0.571
NR2C2
M05670_2.00
Homo sapiens
NRGGTCRN

NYGACCYN
SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX
0.869 0.571
RARG
M02397_2.00
Homo sapiens
VGGTCANN

NNTGACCB
PBM
Weirauch et al.(2014)
pTH5430
0.863 0.529
Rarg
M00810_2.00
Mus musculus
NNVGKTCANN

NNTGAMCBNN
PBM
Weirauch et al.(2013)
pTH4269
0.863 0.529
RARG
M03391_2.00
Homo sapiens
SRGGTCAAAAGGTCAVD

HBTGACCTTTTGACCYS
SELEX
Jolma et al.(2013)
RARG_1
0.863 0.529
RARG
M03392_2.00
Homo sapiens
RAGGTCAHVHWRAGGTCA

TGACCTYWDBDTGACCTY
SELEX
Jolma et al.(2013)
RARG_2
0.863 0.529
RARG
M03393_2.00
Homo sapiens
RRGGTCAHNNRAGGTCA

TGACCTYNNDTGACCYY
SELEX
Jolma et al.(2013)
RARG_3
0.863 0.529
RARG
M03394_2.00
Homo sapiens
GAGGTCAAAAGGTCAY

RTGACCTTTTGACCTC
SELEX
Jolma et al.(2013)
RARG_4
0.863 0.529
RARG
M03395_2.00
Homo sapiens
RAGGTCAABYARRGKTCA

TGAMCYYTRVTTGACCTY
SELEX
Jolma et al.(2013)
RARG_5
0.863 0.529
RARG
M03396_2.00
Homo sapiens
RAGGTCAHBNVRGGTCA

TGACCYBNVDTGACCTY
SELEX
Jolma et al.(2013)
RARG_6
0.863 0.529
Rarg
M03416_2.00
Mus musculus
RRGGTCAAAAGGTCAH

DTGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
Rarg_1
0.863 0.529
Rarg
M03417_2.00
Mus musculus
RAGGTCAWVHAAAGGTCA

TGACCTTTDBWTGACCTY
SELEX
Jolma et al.(2013)
Rarg_2
0.863 0.529
Rarg
M03418_2.00
Mus musculus
AAGGTCAHSARAGGTCA

TGACCTYTSDTGACCTT
SELEX
Jolma et al.(2013)
Rarg_3
0.863 0.529
RARG
M05653_2.00
Homo sapiens
NRGGTCANV

BNTGACCYN
SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX
0.863 0.529
RARG
M05649_2.00
Homo sapiens
DRGGTCAAAAGKTCAN

NTGAMCTTTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1
0.863 0.529
RARG
M05650_2.00
Homo sapiens
RAGGTCATGACCTH

DAGGTCATGACCTY
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2
0.863 0.529
Rarg
M05885_2.00
Mus musculus
NRGGTCANDRGKKYA

TRMMCYHNTGACCYN
SMiLE-seq
Isakova et al.(2017)
RARg
0.863 0.529
RARG
M09289_2.00
Homo sapiens
RGGTCAVVVWGNMMNNDV

BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B
0.863 0.529
Rarg
M09300_2.00
Mus musculus
RGGTCAVVVWGNMMNNDV

BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C
0.863 0.529
Rarg
M09613_2.00
Mus musculus
RGKTCAAGGBCA

TGVCCTTGAMCY
Misc
Heinz et al.(2010)
ES-RARg_GSE30538
0.863 0.529
RARG
M11167_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RARG_Q3
0.863 0.529
RARG
M05654_2.00
Homo sapiens
NRGGTCRNV

BNYGACCYN
SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX
0.863 0.529
RARG
M05651_2.00
Homo sapiens
DRGGTCAARRGGTCRN

NYGACCYYTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1
0.863 0.529
RARG
M05652_2.00
Homo sapiens
DAGKTCRYGACCYY

RRGGTCRYGAMCTH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2
0.863 0.529
Eip75B
M03928_2.00
Drosophila melanogaster
MWVTAGGTCANN

NNTGACCTABWK
SELEX
Nitta et al.(2015)
Eip75B_1
0.855 0.557
Eip75B
M03929_2.00
Drosophila melanogaster
AWNTRGGTCANTRGGTCA

TGACCYANTGACCYANWT
SELEX
Nitta et al.(2015)
Eip75B_2
0.855 0.557
Eip75B
M06416_2.00
Drosophila melanogaster
KWWNTRGGTCA

TGACCYANWWM
B1H
Zhu et al.(2011)
Eip75B_SANGER_5_FBgn0000568
0.855 0.557
RARA
M03369_2.00
Homo sapiens
RRAGGTCAWBWRRGGTCA

TGACCYYWVWTGACCTYY
SELEX
Jolma et al.(2013)
RARA_1
0.854 0.529
RARA
M03370_2.00
Homo sapiens
RAGGTCAAAAGGTCAWKB

VMWTGACCTTTTGACCTY
SELEX
Jolma et al.(2013)
RARA_2
0.854 0.529
RARA
M03371_2.00
Homo sapiens
AGGTCAHNYWRAGGTCA

TGACCTYWRNDTGACCT
SELEX
Jolma et al.(2013)
RARA_3
0.854 0.529
RARA
M03372_2.00
Homo sapiens
ARGGTCAAAAGGTCA

TGACCTTTTGACCYT
SELEX
Jolma et al.(2013)
RARA_4
0.854 0.529
RARA
M03373_2.00
Homo sapiens
WRRGGTCAHSHRRGGTCA

TGACCYYDSDTGACCYYW
SELEX
Jolma et al.(2013)
RARA_5
0.854 0.529
RARA
M03374_2.00
Homo sapiens
AGGTCAWNNARAGGTCA

TGACCTYTNNWTGACCT
SELEX
Jolma et al.(2013)
RARA_6
0.854 0.529
RARA
M05607_2.00
Homo sapiens
NVGGKCANNRGGKCAN

NTGMCCYNNTGMCCBN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_1
0.854 0.529
RARA
M05608_2.00
Homo sapiens
NVGGKCAYGNCCBN

NVGGNCRTGMCCBN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_2
0.854 0.529
RARA
M05609_2.00
Homo sapiens
NRRGGTCANV

BNTGACCYYN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_3
0.854 0.529
RARA
M05878_2.00
Homo sapiens
RAGGTCA

TGACCTY
SMiLE-seq
Isakova et al.(2017)
RARa
0.854 0.529
RARA
M09277_2.00
Homo sapiens
RRRDVDBSNDRAGKTCARGG

CCYTGAMCTYHNSVHBHYYY
Misc
Kulakovskiy et al.(2013)
RARA_HUMAN.H11MO.0.A
0.854 0.529
RARA
M11137_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR1B1_Q6
0.854 0.529
RARA
M05610_2.00
Homo sapiens
DRGGKCRNDRGGTCRN

NYGACCYHNYGMCCYH
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_1
0.854 0.529
RARA
M05611_2.00
Homo sapiens
NVGGTCAYGMCCYN

NRGGKCRTGACCBN
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_2
0.854 0.529
RARA
M05612_2.00
Homo sapiens
NRAGGTCANN

NNTGACCTYN
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_3
0.854 0.529
Rara
M00185_2.00
Mus musculus
NRGGTCAN

NTGACCYN
PBM
Badis et al.(2009)
Rara_1051
0.854 0.514
Rara
M03432_2.00
Mus musculus
AAAGGTCAHBVRAGGTCA

TGACCTYBVDTGACCTTT
SELEX
Jolma et al.(2013)
Rara_1
0.854 0.514
Rara
M03433_2.00
Mus musculus
AGGTCAHNHAAAGGTCA

TGACCTTTDNDTGACCT
SELEX
Jolma et al.(2013)
Rara_2
0.854 0.514
Rara
M03434_2.00
Mus musculus
RAGGTCAAAAGGTCA

TGACCTTTTGACCTY
SELEX
Jolma et al.(2013)
Rara_3
0.854 0.514
Rara
M09329_2.00
Mus musculus
RGRTCRDRAGKTCAAGGTCA

TGACCTTGAMCTYHYGAYCY
Misc
Kulakovskiy et al.(2013)
RARA_MOUSE.H11MO.0.A
0.854 0.514
Rarb
M02401_2.00
Mus musculus
NRRGGTCAHN

NDTGACCYYN
PBM
Weirauch et al.(2014)
pTH2804
0.852 0.514
RARB
M03355_2.00
Homo sapiens
AAAGGTCAARAGGTCA

TGACCTYTTGACCTTT
SELEX
Jolma et al.(2013)
RARB_1
0.852 0.514
Rarb
M03423_2.00
Mus musculus
WAAGGTCAAAAGGTCA

TGACCTTTTGACCTTW
SELEX
Jolma et al.(2013)
Rarb_1
0.852 0.514
Rarb
M03424_2.00
Mus musculus
RRAGGTCANBWRAGGTCA

TGACCTYWVNTGACCTYY
SELEX
Jolma et al.(2013)
Rarb_2
0.852 0.514
Rarb
M03425_2.00
Mus musculus
AGGTCAHVBWRAGGTCA

TGACCTYWVBDTGACCT
SELEX
Jolma et al.(2013)
Rarb_3
0.852 0.514
RARB
M05563_2.00
Homo sapiens
NHAAGGTCAN

NTGACCTTDN
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_1
0.852 0.514
RARB
M05564_2.00
Homo sapiens
RRGGTCAARRGGTCAN

NTGACCYYTTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_2
0.852 0.514
RARB
M05565_2.00
Homo sapiens
DAGGTCAYGACCYY

RRGGTCRTGACCTH
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_3
0.852 0.514
RARB
M11094_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR1B2_Q6
0.852 0.514
RARB
M05566_2.00
Homo sapiens
NHRAGGTCAH

DTGACCTYDN
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_1
0.852 0.514
RARB
M05567_2.00
Homo sapiens
RRGGTCAHRRGGTCAN

NTGACCYYDTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_2
0.852 0.514
RARB
M05568_2.00
Homo sapiens
RRGGTCAYGACCYY

RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_3
0.852 0.514
sex-1
M02416_2.00
Caenorhabditis elegans
RAGGTCAH

DTGACCTY
PBM
Weirauch et al.(2014)
pTH5667
0.846 0.557
CBG17178
M02392_2.00
Caenorhabditis briggsae
RAGGTCAH

DTGACCTY
PBM
Weirauch et al.(2014)
pTH6634
0.840 0.543
Eip78C
M06427_2.00
Drosophila melanogaster
RGGTCA

TGACCY
B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865
0.833 0.514
ENSPMAG00000000180
M02403_2.00
Petromyzon marinus
RGKWCRN

NYGWMCY
PBM
Weirauch et al.(2014)
pTH5509
0.825 0.586
THRB
M03379_2.00
Homo sapiens
DTGACCTBATVAGGTCAN

NTGACCTBATVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_1
0.821 0.586
THRB
M03380_2.00
Homo sapiens
DTGACCTBANTRAGGTCAH

DTGACCTYANTVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_2
0.821 0.586
THRB
M03381_2.00
Homo sapiens
NTGWCCTYADNTRAGGTCAH

DTGACCTYANHTRAGGWCAN
SELEX
Jolma et al.(2013)
THRB_3
0.821 0.586
THRB
M05629_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_1
0.821 0.586
THRB
M05630_2.00
Homo sapiens
NRRGGTCAYGACCYYN

NRRGGTCRTGACCYYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_2
0.821 0.586
THRB
M05633_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN

NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_1
0.821 0.586
THRB
M05634_2.00
Homo sapiens
TRAGGTCABVYVAGGTCAH

DTGACCTBRBVTGACCTYA
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_2
0.821 0.586
THRB
M09285_2.00
Homo sapiens
VRVSYVABVKSAGGWCA

TGWCCTSMBVTBRSBYB
Misc
Kulakovskiy et al.(2013)
THB_HUMAN.H11MO.0.C
0.821 0.586
THRB
M11150_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RBETA_Q6_01
0.821 0.586
THRB
M05631_2.00
Homo sapiens
NRGGTYRDRGGKYRN

NYRMCCYHYRACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_1
0.821 0.586
THRB
M05632_2.00
Homo sapiens
NNRGGTCAYGACCYBN

NVRGGTCRTGACCYNN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_2
0.821 0.586
THRB
M05635_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN

NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_1
0.821 0.586
THRB
M05636_2.00
Homo sapiens
YRAGGWCAYGYRAGGWCAH

DTGWCCTYRCRTGWCCTYR
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_2
0.821 0.586
THRA
M03368_2.00
Homo sapiens
DTGACCTYATVAGGTCAH

DTGACCTBATRAGGTCAH
SELEX
Jolma et al.(2013)
THRA_1
0.791 0.571
THRA
M09275_2.00
Homo sapiens
RGKWSDNNYVAGGWSAN

NTSWCCTBRNNHSWMCY
Misc
Kulakovskiy et al.(2013)
THA_HUMAN.H11MO.0.C
0.791 0.571
Thra
M09333_2.00
Mus musculus
VRGGKCANNYVRGGHCA

TGDCCYBRNNTGMCCYB
Misc
Kulakovskiy et al.(2013)
THA_MOUSE.H11MO.0.C
0.791 0.571
Thra
M09619_2.00
Mus musculus
GGKCANNYVRGGHCA

TGDCCYBRNNTGMCC
Misc
Heinz et al.(2010)
C17.2-THRa_GSE38347
0.791 0.571
THRA
M11135_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RALPHA_Q6
0.791 0.571
Hr78
M06430_2.00
Drosophila melanogaster
HVAGGTCA

TGACCTBD
B1H
Zhu et al.(2011)
Hr78_SANGER_5_FBgn0015239
0.787 0.543
GAG_AVIER
M11193_2.00
Avian erythroblastosis virus
VHNTRAGGTCACSSNN

NNSSGTGACCTYANDB
Transfac
Matys et al.(2006)
V$T3R_01
0.787 0.543
VDR
M03363_2.00
Homo sapiens
GRGTTCAYHGRGTTCA

TGAACYCDRTGAACYC
SELEX
Jolma et al.(2013)
VDR_1
0.783 0.571
Vdr
M03429_2.00
Mus musculus
RRGTTCAYHGRGTTCA

TGAACYCDRTGAACYY
SELEX
Jolma et al.(2013)
Vdr_1
0.783 0.571
VDR
M05877_2.00
Homo sapiens
HRRGTTCA

TGAACYYD
SMiLE-seq
Isakova et al.(2017)
VDR
0.783 0.571
VDR
M09269_2.00
Homo sapiens
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A
0.783 0.571
Vdr
M09315_2.00
Mus musculus
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A
0.783 0.571
VDR
M09606_2.00
Homo sapiens
NRRGGTCANNRRGKKCANNN

NNNTGMMCYYNNTGACCYYN
Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484
0.783 0.571
VDR
M11116_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q3
0.783 0.571
VDR
M11117_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6_01
0.783 0.571
VDR
M11118_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6
0.783 0.571
Q6VU64_APLCA
M02423_2.00
Aplysia californica
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6055
0.767 0.486
Rxrg
M02400_2.00
Mus musculus
VRGGTCAN

NTGACCYB
PBM
Weirauch et al.(2014)
pTH2880
0.756 0.443
RXRG
M03375_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRG_1
0.756 0.443
RXRG
M03376_2.00
Homo sapiens
RRGGTCATGACCYY

RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRG_2
0.756 0.443
RXRG
M03377_2.00
Homo sapiens
GRGGTCAAAGGTCA

TGACCTTTGACCYC
SELEX
Jolma et al.(2013)
RXRG_3
0.756 0.443
RXRG
M03378_2.00
Homo sapiens
NRGGTCATGACCYC

GRGGTCATGACCYN
SELEX
Jolma et al.(2013)
RXRG_4
0.756 0.443
RXRG
M02746_2.00
Homo sapiens
GGTCAAAGGTCA

TGACCTTTGACC
SELEX
Jolma et al.(2010)
RXRG_dimer
0.756 0.443
RXRG
M05615_2.00
Homo sapiens
VRGGTCAAAGGTCAN

NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1
0.756 0.443
RXRG
M05616_2.00
Homo sapiens
RRGGTCAYGACCYY

RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2
0.756 0.443
RXRG
M05879_2.00
Homo sapiens
RGGTBAARGGTBRND

HNYVACCYTTVACCY
SMiLE-seq
Isakova et al.(2017)
RXRg
0.756 0.443
RXRG
M09280_2.00
Homo sapiens
NGTCAAAGGTCAH

DTGACCTTTGACN
Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B
0.756 0.443
Rxrg
M09305_2.00
Mus musculus
VDDVDNSVNRAGKTCAAGGYCA

TGRCCTTGAMCTYNBSNHBHHB
Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B
0.756 0.443
RXRG
M05617_2.00
Homo sapiens
DRGGTBAARGGTBRN

NYVACCYTTVACCYH
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1
0.756 0.443
RXRG
M05618_2.00
Homo sapiens
VRGGTCAYGACCYB

VRGGTCRTGACCYB
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2
0.756 0.443
usp
M03934_2.00
Drosophila melanogaster
ARRGGTCAAAGGTCA

TGACCTTTGACCYYT
SELEX
Nitta et al.(2015)
usp_1
0.754 0.486
usp
M06426_2.00
Drosophila melanogaster
HRRGGTCAH

DTGACCYYD
B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964
0.754 0.486
usp
M02709_2.00
Drosophila melanogaster
GGGGTCACSN

NSGTGACCCC
SELEX
Mathelier et al.(2014)
MA0016.1
0.754 0.486
usp
M09689_2.00
Drosophila melanogaster
KRGGTCACG

CGTGACCYM
Misc
Kulakovskiy et al.(2009)
usp
0.754 0.486
usp
M11191_2.00
Drosophila melanogaster
GRGGTCAYS

SRTGACCYC
Transfac
Matys et al.(2006)
I$CF1_01
0.754 0.486
usp
M11192_2.00
Drosophila melanogaster
GGGGTCAYS

SRTGACCCC
Transfac
Matys et al.(2006)
I$CF1_02
0.754 0.486
NR1I2
M03925_2.00
Homo sapiens
RGKKCRNNVRGKKCR

YGMMCYBNNYGMMCY
SELEX
Nitta et al.(2015)
NR1I2_1
0.752 0.557
NR1I2
M05625_2.00
Homo sapiens
VRGTTCRNNSRGKTCRH

DYGAMCYSNNYGAACYB
SELEX
Yin et al.(2017)
NR1I2_eDBD_HT-SELEX
0.752 0.557
NR1I2
M09283_2.00
Homo sapiens
DDRRBTYMDNNRAGKTCAN

NTGAMCTYNNHKRAVYYHH
Misc
Kulakovskiy et al.(2013)
NR1I2_HUMAN.H11MO.0.C
0.752 0.557
NR1I2
M05626_2.00
Homo sapiens
VRGKKCRNNVRGKKCRN

NYGMMCYBNNYGMMCYB
SELEX
Yin et al.(2017)
NR1I2_eDBD_Methyl-HT-SELEX
0.752 0.557
Rxra
M00181_2.00
Mus musculus
NRRGGTCANN

NNTGACCYYN
PBM
Badis et al.(2009)
Rxra_1035
0.746 0.457
RXRA
M03408_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRA_1
0.746 0.457
RXRA
M03409_2.00
Homo sapiens
RRGGTCATGACCYY

RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRA_2
0.746 0.457
RXRA
M03410_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRA_3
0.746 0.457
RXRA
M03411_2.00
Homo sapiens
RRGGTCATGACCYY

RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRA_4
0.746 0.457
Rxra
M03421_2.00
Mus musculus
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Rxra_1
0.746 0.457
Rxra
M03422_2.00
Mus musculus
RGGTCATGACCY

RGGTCATGACCY
SELEX
Jolma et al.(2013)
Rxra_2
0.746 0.457
RXRA
M05671_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX
0.746 0.457
RXRA
M05882_2.00
Homo sapiens
VRGKTBAAAGGTYRH

DYRACCTTTVAMCYB
SMiLE-seq
Isakova et al.(2017)
RXRa
0.746 0.457
RXRA
M07993_2.00
Homo sapiens
NRRGGTCA

TGACCYYN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha
0.746 0.457
RXRA
M07994_2.00
Homo sapiens
DDNNMRRGGTCANDN

NHNTGACCYYKNNHH
ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha
0.746 0.457
RXRA
M09294_2.00
Homo sapiens
VDDDNDNNVRRRGGKCAVDV

BHBTGMCCYYYBNNHNHHHB
Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A
0.746 0.457
Rxra
M09306_2.00
Mus musculus
DDVNNNNNRAGKTCAAGGYCA

TGRCCTTGAMCTYNNNNNBHH
Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A
0.746 0.457
RXRA
M11182_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RXRA_07
0.746 0.457
RXRA
M05672_2.00
Homo sapiens
RRGGTCAAAGGTCAH

DTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX
0.746 0.457
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPUH_0000103801-mRNA-1 Nuclear receptor 26 95

Links

Other Nuclear receptor family TFs
Other Gongylonema pulchrum TFs

2149 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nOo.2.0.1.g07306 Onchocerca ochengi nOo.2.0.1.g07306 I 0.992
Bm2982 Brugia malayi Bm2982 I 0.992
nLs.2.1.2.g05295 Litomosoides sigmodontis nLs.2.1.2.g05295 I 0.992
DME_0000391501 Dracunculus medinensis DME_0000391501 I 0.992
nAv.1.0.1.g02667 Acanthocheilonema viteae nAv.1.0.1.g02667 I 0.992
EEL_0000192101 Elaeophora elaphi EEL_0000192101 I 0.992
OFLC_0000511401 Onchocerca flexuosa OFLC_0000511401 I 0.992
LOAG_16842 Loa loa LOAG_16842 I 0.992
TCLT_0000569201 Thelazia callipaeda TCLT_0000569201 I 0.992
WBGene00245913 Onchocerca volvulus WBGene00245913 I 0.992
BTMF_0001180601 Brugia timori BTMF_0001180601 I 0.992
ASU_11275 Ascaris suum ASU_11275 I 0.992
TCNE_0001577801 Toxocara canis TCNE_0001577801 I 0.992
WUBG_00356 Wuchereria bancrofti WUBG_00356 I 0.992
L892_g24092 Steinernema scapterisci L892_g24092 I 0.991
L596_g17693 Steinernema carpocapsae L596_g17693 I 0.991
L889_g17804 Steinernema feltiae L889_g17804 I 0.991
L893_g6815 Steinernema glaseri L893_g6815 I 0.991
L898_g14201 Steinernema monticolum L898_g14201 I 0.991
DICVIV_05958 Dictyocaulus viviparus DICVIV_05958 I 0.990
ANCCAN_11234 Ancylostoma caninum ANCCAN_11234 I 0.987
TELCIR_16351 Teladorsagia circumcincta TELCIR_16351 I 0.987
NECAME_11142 Necator americanus NECAME_11142 I 0.987
NBR_0001980401 Nippostrongylus brasiliensis NBR_0001980401 I 0.987
HCOI00910600 Haemonchus contortus HCOI00910600 I 0.987
HCOI00433800 Haemonchus contortus HCOI00433800 I 0.987
ACOC_0001278301 Angiostrongylus costaricensis ACOC_0001278301 I 0.987
PHUM467460 Pediculus humanus PHUM467460 I 0.982
L798_01568 Zootermopsis nevadensis L798_01568 I 0.981
GB48059 Apis mellifera GB48059 I 0.981
ISCW003147 Ixodes scapularis ISCW003147 I 0.981
NV11088 Nasonia vitripennis NV11088 I 0.981
RPRC014174 Rhodnius prolixus RPRC014174 I 0.981
SMAR011767 Strigamia maritima SMAR011767 I 0.981
TC012112 Tribolium castaneum TC012112 I 0.981
tetur01g15140 Tetranychus urticae tetur01g15140 I 0.981
D917_00700 Trichinella nativa D917_00700 I 0.981
TMUE_s0008014200 Trichuris muris TMUE_s0008014200 I 0.981
EFV58098 Trichinella spiralis EFV58098 I 0.981
ACYPI001692 Acyrthosiphon pisum ACYPI001692 I 0.981
D918_02615 Trichuris suis D918_02615 I 0.981
DAPPUDRAFT_319648 Daphnia pulex DAPPUDRAFT_319648 I 0.981
nRc.2.0.1.g36086 Romanomermis culicivorax nRc.2.0.1.g36086 I 0.979
LDEC009466 Leptinotarsa decemlineata LDEC009466 I 0.978
CLEC002129 Cimex lectularius CLEC002129 I 0.976
EcR Drosophila melanogaster FBgn0000546 D 0.974
CPIJ002963 Culex quinquefasciatus CPIJ002963 I 0.974
GF13818 Drosophila ananassae FBgn0090845 I 0.974
LCUP007589 Lucilia cuprina LCUP007589 I 0.974
GD10334 Drosophila simulans FBgn0182106 I 0.974
EcR Drosophila pseudoobscura FBgn0243551 I 0.974
GE19426 Drosophila yakuba FBgn0236769 I 0.974
GM16480 Drosophila sechellia FBgn0171395 I 0.974
HMEL012265 Heliconius melpomene HMEL012265 I 0.974
GL16258 Drosophila persimilis FBgn0153862 I 0.974
KGM_08219 Danaus plexippus KGM_08219 I 0.974
GK21996 Drosophila willistoni FBgn0223981 I 0.974
GA24101 Drosophila pseudoobscura FBgn0245500 I 0.974
AFAF021556 Anopheles farauti AFAF021556 I 0.974
AFUN015736 Anopheles funestus AFUN015736 I 0.974
AMEM018998 Anopheles merus AMEM018998 I 0.974
ADIR001886 Anopheles dirus ADIR001886 I 0.974
ACUA000806 Anopheles culicifacies ACUA000806 I 0.974
AARA003299 Anopheles arabiensis AARA003299 I 0.974
AATE015478 Anopheles atroparvus AATE015478 I 0.974
ACOM026429 Anopheles coluzzii ACOM026429 I 0.974
AMIN006955 Anopheles minimus AMIN006955 I 0.974
AQUA002870 Anopheles quadriannulatus AQUA002870 I 0.974
ADAC008672 Anopheles darlingi ADAC008672 I 0.974
ECR Aedes aegypti AAEL009600 I 0.974
CpipJ_CPIJ002963 Culex pipiens CpipJ_CPIJ002963 I 0.974
AGAP012211 Anopheles gambiae AGAP012211 I 0.974
PPAI003337 Phlebotomus papatasi PPAI003337 I 0.974
ASTEI02489 Anopheles stephensi ASTEI02489 I 0.974
MDOA013387 Musca domestica MDOA013387 I 0.974
BGIBMGA006767 Bombyx mori BGIBMGA006767 I 0.974
AALB010791 Anopheles albimanus AALB010791 I 0.974
AEPI000843 Anopheles epiroticus AEPI000843 I 0.974
GG10830 Drosophila erecta FBgn0103135 I 0.973
GI21285 Drosophila mojavensis FBgn0144015 I 0.971
GJ20887 Drosophila virilis FBgn0208023 I 0.971
GH20948 Drosophila grimshawi FBgn0128410 I 0.971
ENSECAG00000015617 Equus caballus ENSECAG00000015617 I 0.965
ENSOANG00000004519 Ornithorhynchus anatinus ENSOANG00000004519 I 0.965
ENSCAFG00000009671 Canis familiaris ENSCAFG00000009671 I 0.965
ENSGALG00000002170 Gallus gallus ENSGALG00000002170 I 0.965
Gfo_R010069 Geospiza fortis Gfo_R010069 I 0.965
ENSAMEG00000017106 Ailuropoda melanoleuca ENSAMEG00000017106 I 0.965
ENSLOCG00000010390 Lepisosteus oculatus ENSLOCG00000010390 I 0.965
ENSOGAG00000030317 Otolemur garnettii ENSOGAG00000030317 I 0.965
ENSMPUG00000005775 Mustela putorius furo ENSMPUG00000005775 I 0.965
ENSAPLG00000008338 Anas platyrhynchos ENSAPLG00000008338 I 0.965
ENSLACG00000018478 Latimeria chalumnae ENSLACG00000018478 I 0.965
ENSSHAG00000010518 Sarcophilus harrisii ENSSHAG00000010518 I 0.965
nr1h5.L Xenopus laevis XB-GENE-864860 I 0.965
Nr1h5 Mus musculus ENSMUSG00000048938 I 0.965
nr1h5.S Xenopus laevis XB-GENE-6251607 D 0.965
nr1h5 Xenopus tropicalis XB-GENE-486722 I 0.965
Afo_R001939 Aptenodytes forsteri Afo_R001939 I 0.965
Aan_R010496 Calypte anna Aan_R010496 I 0.965
Alligator_sinensis_CCG004779.1 Alligator sinensis Alligator_sinensis_CCG004779.1 I 0.965
ENSSTOG00000027072 Ictidomys tridecemlineatus ENSSTOG00000027072 I 0.965
ENSFALG00000003389 Ficedula albicollis ENSFALG00000003389 I 0.965
ENSTGUG00000000964 Taeniopygia guttata ENSTGUG00000000964 I 0.965
ENSMODG00000004721 Monodelphis domestica ENSMODG00000004721 I 0.965
ENSFCAG00000028538 Felis catus ENSFCAG00000028538 I 0.965
Brh_R011894 Buceros rhinoceros Brh_R011894 I 0.965
ENSACAG00000003336 Anolis carolinensis ENSACAG00000003336 I 0.964
Pvit_15387 Pogona vitticeps Pvit_15387 I 0.964
Cmyd_10021697 Chelonia mydas Cmyd_10021697 I 0.964
Ogr07445 Ophisaurus gracilis Ogr07445 I 0.962
ENSLOCG00000015206 Lepisosteus oculatus ENSLOCG00000015206 I 0.962
ENSPSIG00000003828 Pelodiscus sinensis ENSPSIG00000003828 I 0.961
ENSAMXG00000020274 Astyanax mexicanus ENSAMXG00000020274 I 0.961
ENSFALG00000011082 Ficedula albicollis ENSFALG00000011082 I 0.961
ENSPSIG00000005774 Pelodiscus sinensis ENSPSIG00000005774 I 0.961
NR1H4 Meleagris gallopavo ENSMGAG00000011690 I 0.961
nr1h4 Danio rerio ENSDARG00000057741 I 0.961
NR1H4 Monodelphis domestica ENSMODG00000004996 I 0.961
nr1h4 Oryzias latipes ENSORLG00000011270 I 0.961
ENSOCUG00000023188 Oryctolagus cuniculus ENSOCUG00000023188 I 0.961
nr1h4 Gasterosteus aculeatus ENSGACG00000011745 I 0.961
NR1H4 Gallus gallus ENSGALG00000011594 I 0.961
ENSONIG00000014678 Oreochromis niloticus ENSONIG00000014678 I 0.961
ENSGMOG00000003773 Gadus morhua ENSGMOG00000003773 I 0.961
ENSMEUG00000009703 Macropus eugenii ENSMEUG00000009703 I 0.961
ENSPFOG00000016166 Poecilia formosa ENSPFOG00000016166 I 0.961
ENSAPLG00000013289 Anas platyrhynchos ENSAPLG00000013289 I 0.961
ENSSHAG00000012333 Sarcophilus harrisii ENSSHAG00000012333 I 0.961
nr1h4 Tetraodon nigroviridis ENSTNIG00000012144 I 0.961
nr1h4 Takifugu rubripes ENSTRUG00000007314 I 0.961
Gfo_R005191 Geospiza fortis Gfo_R005191 I 0.961
ENSXMAG00000001433 Xiphophorus maculatus ENSXMAG00000001433 I 0.961
Aan_R006662 Calypte anna Aan_R006662 I 0.961
Afo_R012936 Aptenodytes forsteri Afo_R012936 I 0.961
Brh_R011463 Buceros rhinoceros Brh_R011463 I 0.961
NR1H4 Taeniopygia guttata ENSTGUG00000008977 I 0.961
Tal_R013008 Tyto alba Tal_R013008 I 0.961
Cmyd_10004101 Chelonia mydas Cmyd_10004101 I 0.961
ENSLAFG00000028744 Loxodonta africana ENSLAFG00000028744 I 0.960
nr1h5 Gasterosteus aculeatus ENSGACG00000004938 I 0.959
ENSXMAG00000012678 Xiphophorus maculatus ENSXMAG00000012678 I 0.959
ENSGMOG00000015966 Gadus morhua ENSGMOG00000015966 I 0.959
ENSONIG00000009252 Oreochromis niloticus ENSONIG00000009252 I 0.959
nr1h5 Tetraodon nigroviridis ENSTNIG00000003487 I 0.959
nr1h5 Danio rerio ENSDARG00000031046 I 0.959
ENSPFOG00000016102 Poecilia formosa ENSPFOG00000016102 I 0.959
nr1h5 Tetraodon nigroviridis ENSTNIG00000004195 I 0.959
nr1h5 Takifugu rubripes ENSTRUG00000008191 I 0.959
e_gw.91.225.1 Branchiostoma floridae e_gw.91.225.1 I 0.958
e_gw.91.63.1 Branchiostoma floridae e_gw.91.63.1 I 0.958
NR1H4 Ornithorhynchus anatinus ENSOANG00000005583 I 0.957
Pvit_18004 Pogona vitticeps Pvit_18004 I 0.957
CGI_10007606 Crassostrea gigas CGI_10007606 I 0.956
NR1H4 Anolis carolinensis ENSACAG00000012333 I 0.955
estExt_fgenesh2_pg.C_2910013 Branchiostoma floridae estExt_fgenesh2_pg.C_2910013 I 0.952
gw.2854.3.1 Branchiostoma floridae gw.2854.3.1 I 0.952
BGLB013636 Biomphalaria glabrata BGLB013636 I 0.951
LotgiG170342 Lottia gigantea LotgiG170342 I 0.950
NR1H4 Canis familiaris ENSCAFG00000006835 I 0.948
NR1H4 Cavia porcellus ENSCPOG00000002168 I 0.948
NR1H4 Equus caballus ENSECAG00000018166 I 0.948
Nr1h4 Dipodomys ordii ENSDORG00000001224 I 0.948
ENSCSAG00000003451 Chlorocebus sabaeus ENSCSAG00000003451 I 0.948
NR1H4 Dasypus novemcinctus ENSDNOG00000047912 I 0.948
NR1H4 Erinaceus europaeus ENSEEUG00000012218 I 0.948
NR1H4 Echinops telfairi ENSETEG00000019430 I 0.948
NR1H4 Choloepus hoffmanni ENSCHOG00000013215 I 0.948
NR1H4 Felis catus ENSFCAG00000006469 I 0.948
NR1H4 Callithrix jacchus ENSCJAG00000002087 I 0.948
NR1H4 Homo sapiens ENSG00000012504 D 0.948
ENSSTOG00000011771 Ictidomys tridecemlineatus ENSSTOG00000011771 I 0.948
NR1H4 Sorex araneus ENSSARG00000004689 I 0.948
NR1H4 Tupaia belangeri ENSTBEG00000016715 I 0.948
NR1H4 Pteropus vampyrus ENSPVAG00000014680 I 0.948
NR1H4 Pan troglodytes ENSPTRG00000005345 I 0.948
ENSPPYG00000004867 Pongo abelii ENSPPYG00000004867 I 0.948
NR1H4 Tursiops truncatus ENSTTRG00000016373 I 0.948
NR1H4 Bos taurus ENSBTAG00000013596 I 0.948
Myotis_brandtii_NR1H4_10025557 Myotis brandtii Myotis_brandtii_NR1H4_10025557 I 0.948
ENSP00000188403 Macaca fascicularis ENSP00000188403 I 0.948
ENSBTAP00000018079-D1 Bos grunniens ENSBTAP00000018079-D1 I 0.948
XP_002159396.1 Hydra magnipapillata XP_002159396.1 I 0.948
ENSPANG00000023009 Papio anubis ENSPANG00000023009 I 0.948
NR1H4 Ochotona princeps ENSOPRG00000010997 I 0.948
NR1H4 Macaca mulatta ENSMMUG00000003571 I 0.948
NR1H4 Myotis lucifugus ENSMLUG00000009273 I 0.948
NR1H4 Microcebus murinus ENSMICG00000013522 I 0.948
NR1H4 Loxodonta africana ENSLAFG00000009154 I 0.948
ENSMPUG00000011573 Mustela putorius furo ENSMPUG00000011573 I 0.948
Nr1h4 Mus musculus ENSMUSG00000047638 D 0.948
NR1H4 Otolemur garnettii ENSOGAG00000007874 I 0.948
NR1H4 Oryctolagus cuniculus ENSOCUG00000007177 I 0.948
ENSOARG00000013901 Ovis aries ENSOARG00000013901 I 0.948
ENSNLEG00000006093 Nomascus leucogenys ENSNLEG00000006093 I 0.948
NR1H4 Gorilla gorilla ENSGGOG00000008137 I 0.948
NR1H4 Sus scrofa ENSSSCG00000000875 I 0.948
ENSAMEG00000015232 Ailuropoda melanoleuca ENSAMEG00000015232 I 0.948
Ogr04328 Ophisaurus gracilis Ogr04328 I 0.947
Pvit_17674 Pogona vitticeps Pvit_17674 I 0.947
NR1H2 Anolis carolinensis ENSACAG00000012517 I 0.947
NR1H3 Cavia porcellus ENSCPOG00000013362 I 0.946
ENSGALG00000008202 Gallus gallus ENSGALG00000008202 I 0.945
Ogr17890 Ophisaurus gracilis Ogr17890 I 0.945
Gfo_R014176 Geospiza fortis Gfo_R014176 I 0.945
ENSTGUG00000010475 Taeniopygia guttata ENSTGUG00000010475 I 0.945
NR1H3 Meleagris gallopavo ENSMGAG00000010751 I 0.945
ENSFALG00000006313 Ficedula albicollis ENSFALG00000006313 I 0.945
nr1h2.L Xenopus laevis XB-GENE-864925 I 0.945
Cmyd_10014955 Chelonia mydas Cmyd_10014955 I 0.945
Brh_R002313 Buceros rhinoceros Brh_R002313 I 0.945
Afo_R002292 Aptenodytes forsteri Afo_R002292 I 0.945
nr1h2 Xenopus tropicalis XB-GENE-482950 I 0.945
ENSAPLG00000010925 Anas platyrhynchos ENSAPLG00000010925 I 0.945
Pvit_08677 Pogona vitticeps Pvit_08677 I 0.945
ENSPSIG00000010360 Pelodiscus sinensis ENSPSIG00000010360 I 0.945
ENSSTOG00000007611 Ictidomys tridecemlineatus ENSSTOG00000007611 I 0.944
NR1H3 Homo sapiens ENSG00000025434 D 0.944
NR1H3 Callithrix jacchus ENSCJAG00000020019 I 0.944
ENSLACG00000015170 Latimeria chalumnae ENSLACG00000015170 I 0.944
NR1H3 Sus scrofa ENSSSCG00000013241 I 0.944
Nr1h3 Mus musculus ENSMUSG00000002108 D 0.944
NR1H3 Macaca mulatta ENSMMUG00000015598 I 0.944
NR1H3 Bos taurus ENSBTAG00000010681 I 0.944
NR1H3 Oryctolagus cuniculus ENSOCUG00000002095 I 0.944
NR1H3 Myotis lucifugus ENSMLUG00000017646 I 0.944
NR1H3 Ornithorhynchus anatinus ENSOANG00000006250 I 0.944
ENSSHAG00000017152 Sarcophilus harrisii ENSSHAG00000017152 I 0.944
NR1H3 Loxodonta africana ENSLAFG00000009267 I 0.944
NR1H3 Gorilla gorilla ENSGGOG00000008583 I 0.944
NR1H3 Monodelphis domestica ENSMODG00000019906 I 0.944
ENSNLEG00000014458 Nomascus leucogenys ENSNLEG00000014458 I 0.944
ENSAMXG00000012228 Astyanax mexicanus ENSAMXG00000012228 I 0.944
ENSOARG00000005858 Ovis aries ENSOARG00000005858 I 0.944
Myotis_brandtii_NR1H3_10025520 Myotis brandtii Myotis_brandtii_NR1H3_10025520 I 0.944
NR1H3 Felis catus ENSFCAG00000002528 I 0.944
NR1H3 Tursiops truncatus ENSTTRG00000014149 I 0.944
NR1H3 Echinops telfairi ENSETEG00000000415 I 0.944
NR1H3 Canis familiaris ENSCAFG00000008824 I 0.944
ENSPANG00000016658 Papio anubis ENSPANG00000016658 I 0.944
NR1H3 Microcebus murinus ENSMICG00000007066 I 0.944
ENSMPUG00000004787 Mustela putorius furo ENSMPUG00000004787 I 0.944
ENSPPYG00000003309 Pongo abelii ENSPPYG00000003309 I 0.944
NR1H3 Equus caballus ENSECAG00000015726 I 0.944
NR1H3 Erinaceus europaeus ENSEEUG00000003283 I 0.944
NR1H3 Procavia capensis ENSPCAG00000016194 I 0.944
ENSCSAG00000005699 Chlorocebus sabaeus ENSCSAG00000005699 I 0.944
Nr1h3 Dipodomys ordii ENSDORG00000007747 I 0.944
Nr1h4 Rattus norvegicus ENSRNOG00000007197 I 0.944
ENSAMEG00000007298 Ailuropoda melanoleuca ENSAMEG00000007298 I 0.944
NR1H3 Pan troglodytes ENSPTRG00000003560 I 0.944
NR1H3 Choloepus hoffmanni ENSCHOG00000001621 I 0.944
NR1H3 Dasypus novemcinctus ENSDNOG00000011206 I 0.944
ENSDNOG00000034800 Dasypus novemcinctus ENSDNOG00000034800 I 0.944
ENSMMUP00000037145 Macaca fascicularis ENSMMUP00000037145 I 0.944
NR1H3 Anolis carolinensis ENSACAG00000002940 I 0.944
Nr1h3 Rattus norvegicus ENSRNOG00000013172 I 0.944
ENSBTAP00000014131-D1 Bos grunniens ENSBTAP00000014131-D1 I 0.944
NR1H3 Ochotona princeps ENSOPRG00000009497 I 0.944
HelroG191405 Helobdella robusta HelroG191405 I 0.942
RORC Pan troglodytes ENSPTRG00000032436 I 0.941
ENSPPYG00000000853 Pongo abelii ENSPPYG00000000853 I 0.941
ENSNLEG00000010305 Nomascus leucogenys ENSNLEG00000010305 I 0.941
ENSPANG00000020758 Papio anubis ENSPANG00000020758 I 0.941
NR1H2 Otolemur garnettii ENSOGAG00000012593 I 0.941
RORC Macaca mulatta ENSMMUG00000012138 I 0.941
ENSCSAG00000001825 Chlorocebus sabaeus ENSCSAG00000001825 I 0.941
RORC Gorilla gorilla ENSGGOG00000002223 I 0.941
ENSP00000376461 Macaca fascicularis ENSP00000376461 I 0.941
RORC Homo sapiens ENSG00000143365 D 0.941
RORC Callithrix jacchus ENSCJAG00000008023 I 0.941
ENSLOCG00000014779 Lepisosteus oculatus ENSLOCG00000014779 I 0.940
RORA Loxodonta africana ENSLAFG00000000577 I 0.940
XP_002937524 Xenopus tropicalis XP_002937524 I 0.940
RORA Meleagris gallopavo ENSMGAG00000004471 I 0.940
roraa Gasterosteus aculeatus ENSGACG00000010672 I 0.940
RORA Erinaceus europaeus ENSEEUG00000015809 I 0.940
RORA Echinops telfairi ENSETEG00000001493 I 0.940
ENSAPLG00000005866 Anas platyrhynchos ENSAPLG00000005866 I 0.940
roraa Tetraodon nigroviridis ENSTNIG00000008390 I 0.940
RORA Equus caballus ENSECAG00000016384 I 0.940
RORA Dasypus novemcinctus ENSDNOG00000043276 I 0.940
Rora Dipodomys ordii ENSDORG00000001826 I 0.940
rorcb Tetraodon nigroviridis ENSTNIG00000015337 I 0.940
ENSFALG00000012589 Ficedula albicollis ENSFALG00000012589 I 0.940
RORA Felis catus ENSFCAG00000013642 I 0.940
ENSGMOG00000006930 Gadus morhua ENSGMOG00000006930 I 0.940
ENSGMOG00000012277 Gadus morhua ENSGMOG00000012277 I 0.940
RORA Tupaia belangeri ENSTBEG00000003065 I 0.940
RORA Gorilla gorilla ENSGGOG00000000541 I 0.940
RORA Gallus gallus ENSGALG00000003759 I 0.940
RORA Homo sapiens ENSG00000069667 D 0.940
RORA Taeniopygia guttata ENSTGUG00000005333 I 0.940
rorcb Gasterosteus aculeatus ENSGACG00000015341 I 0.940
ENSLACG00000017448 Latimeria chalumnae ENSLACG00000017448 I 0.940
Rora Mus musculus ENSMUSG00000032238 D 0.940
rorca Oryzias latipes ENSORLG00000003765 I 0.940
roraa Oryzias latipes ENSORLG00000007645 I 0.940
Cmyd_10000975 Chelonia mydas Cmyd_10000975 I 0.940
ENSPANG00000017172 Papio anubis ENSPANG00000017172 I 0.940
RORA Ochotona princeps ENSOPRG00000012364 I 0.940
ENSBTAP00000021144-D1 Bos grunniens ENSBTAP00000021144-D1 I 0.940
ENSONIG00000010247 Oreochromis niloticus ENSONIG00000010247 I 0.940
ENSONIG00000015289 Oreochromis niloticus ENSONIG00000015289 I 0.940
ENSONIG00000015603 Oreochromis niloticus ENSONIG00000015603 I 0.940
ENSP00000261523 Macaca fascicularis ENSP00000261523 I 0.940
Brh_R004006 Buceros rhinoceros Brh_R004006 I 0.940
RORA Procavia capensis ENSPCAG00000006566 I 0.940
Aan_R015083 Calypte anna Aan_R015083 I 0.940
ENSPPYG00000006528 Pongo abelii ENSPPYG00000006528 I 0.940
ENSPSIG00000011314 Pelodiscus sinensis ENSPSIG00000011314 I 0.940
RORA Pan troglodytes ENSPTRG00000007134 I 0.940
Afo_R006180 Aptenodytes forsteri Afo_R006180 I 0.940
ENSPFOG00000017745 Poecilia formosa ENSPFOG00000017745 I 0.940
RORA Pteropus vampyrus ENSPVAG00000011408 I 0.940
ENSPFOG00000003699 Poecilia formosa ENSPFOG00000003699 I 0.940
ENSPFOG00000012359 Poecilia formosa ENSPFOG00000012359 I 0.940
ENSAMEG00000008017 Ailuropoda melanoleuca ENSAMEG00000008017 I 0.940
Rora Rattus norvegicus ENSRNOG00000027145 I 0.940
RORA Monodelphis domestica ENSMODG00000011532 I 0.940
gw.311.78.1 Branchiostoma floridae gw.311.78.1 I 0.940
RORA Sus scrofa ENSSSCG00000004576 I 0.940
Pvit_17370 Pogona vitticeps Pvit_17370 I 0.940
RORA Macaca mulatta ENSMMUG00000018192 I 0.940
rora Xenopus tropicalis XB-GENE-478535 I 0.940
ENSAMXG00000009363 Astyanax mexicanus ENSAMXG00000009363 I 0.940
ENSSTOG00000012400 Ictidomys tridecemlineatus ENSSTOG00000012400 I 0.940
RORA Myotis lucifugus ENSMLUG00000002493 I 0.940
Pvit_17369 Pogona vitticeps Pvit_17369 I 0.940
ENSAMXG00000000403 Astyanax mexicanus ENSAMXG00000000403 I 0.940
RORA Oryctolagus cuniculus ENSOCUG00000012900 I 0.940
Gfo_R008829 Geospiza fortis Gfo_R008829 I 0.940
RORA Otolemur garnettii ENSOGAG00000007357 I 0.940
ENSONIG00000004686 Oreochromis niloticus ENSONIG00000004686 I 0.940
ENSOARG00000020816 Ovis aries ENSOARG00000020816 I 0.940
Myotis_brandtii_RORA_10029423 Myotis brandtii Myotis_brandtii_RORA_10029423 I 0.940
ENSNLEG00000011865 Nomascus leucogenys ENSNLEG00000011865 I 0.940
ENSSHAG00000015734 Sarcophilus harrisii ENSSHAG00000015734 I 0.940
RORA Ornithorhynchus anatinus ENSOANG00000012345 I 0.940
RORA Microcebus murinus ENSMICG00000010861 I 0.940
ENSLOCG00000006502 Lepisosteus oculatus ENSLOCG00000006502 I 0.940
ENSTSYG00000001170 Tarsius syrichta ENSTSYG00000001170 I 0.940
RORA Callithrix jacchus ENSCJAG00000003989 I 0.940
ENSXMAG00000003228 Xiphophorus maculatus ENSXMAG00000003228 I 0.940
RORA Tursiops truncatus ENSTTRG00000007718 I 0.940
RORA Cavia porcellus ENSCPOG00000008494 I 0.940
rorcb Takifugu rubripes ENSTRUG00000005569 I 0.940
RORA Canis familiaris ENSCAFG00000016700 I 0.940
roraa Takifugu rubripes ENSTRUG00000010553 I 0.940
rorca Takifugu rubripes ENSTRUG00000003189 I 0.940
rorca Danio rerio ENSDARG00000057231 I 0.940
roraa Danio rerio ENSDARG00000031768 I 0.940
RORA Vicugna pacos ENSVPAG00000007893 I 0.940
ENSXMAG00000019296 Xiphophorus maculatus ENSXMAG00000019296 I 0.940
RORA Choloepus hoffmanni ENSCHOG00000011593 I 0.940
RORA Bos taurus ENSBTAG00000015904 I 0.940
rorcb Danio rerio ENSDARG00000017780 I 0.940
ENSCSAG00000012081 Chlorocebus sabaeus ENSCSAG00000012081 I 0.940
RORC Otolemur garnettii ENSOGAG00000024385 I 0.939
Sakowv30016920m.g Saccoglossus kowalevskii Sakowv30016920m.g I 0.939
Sakowv30035171m.g Saccoglossus kowalevskii Sakowv30035171m.g I 0.939
Ogr03392 Ophisaurus gracilis Ogr03392 I 0.939
Pvit_09819 Pogona vitticeps Pvit_09819 I 0.939
rorca Gasterosteus aculeatus ENSGACG00000012280 I 0.939
rorca Tetraodon nigroviridis ENSTNIG00000010689 I 0.938
NR1H3 Otolemur garnettii ENSOGAG00000012410 I 0.938
ENSXMAG00000018442 Xiphophorus maculatus ENSXMAG00000018442 I 0.938
ENSPFOG00000000838 Poecilia formosa ENSPFOG00000000838 I 0.938
Afo_R010049 Aptenodytes forsteri Afo_R010049 I 0.937
ENSAPLG00000011493 Anas platyrhynchos ENSAPLG00000011493 I 0.937
Alligator_sinensis_CCG007724.1 Alligator sinensis Alligator_sinensis_CCG007724.1 I 0.937
RORB Pteropus vampyrus ENSPVAG00000007216 I 0.937
ENSFALG00000012763 Ficedula albicollis ENSFALG00000012763 I 0.937
nRc.2.0.1.g46780 Romanomermis culicivorax nRc.2.0.1.g46780 I 0.937
rorb Gasterosteus aculeatus ENSGACG00000011556 I 0.937
ENSSHAG00000002191 Sarcophilus harrisii ENSSHAG00000002191 I 0.937
Gfo_R007588 Geospiza fortis Gfo_R007588 I 0.937
Gfo_R008263 Geospiza fortis Gfo_R008263 I 0.937
ENSCSAG00000008161 Chlorocebus sabaeus ENSCSAG00000008161 I 0.937
ENSSTOG00000013264 Ictidomys tridecemlineatus ENSSTOG00000013264 I 0.937
ENSPFOG00000015704 Poecilia formosa ENSPFOG00000015704 I 0.937
Alligator_sinensis_CCG000418.1 Alligator sinensis Alligator_sinensis_CCG000418.1 I 0.937
rorb Oryzias latipes ENSORLG00000012441 I 0.937
ENSMGAG00000002222 Meleagris gallopavo ENSMGAG00000002222 I 0.937
RORB Bos taurus ENSBTAG00000021699 I 0.937
RORB Homo sapiens ENSG00000198963 D 0.937
RORB Otolemur garnettii ENSOGAG00000001523 I 0.937
RORB Loxodonta africana ENSLAFG00000012757 I 0.937
Brh_R003242 Buceros rhinoceros Brh_R003242 I 0.937
ENSLACG00000006103 Latimeria chalumnae ENSLACG00000006103 I 0.937
RORB Procavia capensis ENSPCAG00000012274 I 0.937
RORB Choloepus hoffmanni ENSCHOG00000009723 I 0.937
ENSPANG00000024927 Papio anubis ENSPANG00000024927 I 0.937
ENSBTAP00000028921-D1 Bos grunniens ENSBTAP00000028921-D1 I 0.937
ENSAMXG00000018669 Astyanax mexicanus ENSAMXG00000018669 I 0.937
RORB Gorilla gorilla ENSGGOG00000011970 I 0.937
Rorb Rattus norvegicus ENSRNOG00000013413 I 0.937
RORB Ochotona princeps ENSOPRG00000016130 I 0.937
ENSTGUG00000000264 Taeniopygia guttata ENSTGUG00000000264 I 0.937
RORB Echinops telfairi ENSETEG00000017457 I 0.937
RORB Felis catus ENSFCAG00000011421 I 0.937
ENSGALG00000001035 Gallus gallus ENSGALG00000001035 I 0.937
RORB Tupaia belangeri ENSTBEG00000010761 I 0.937
ENSP00000379507 Macaca fascicularis ENSP00000379507 I 0.937
Cmyd_10006717 Chelonia mydas Cmyd_10006717 I 0.937
ENSONIG00000010762 Oreochromis niloticus ENSONIG00000010762 I 0.937
RORB Gallus gallus ENSGALG00000015150 I 0.937
RORB Taeniopygia guttata ENSTGUG00000000785 I 0.937
RORB Canis familiaris ENSCAFG00000001769 I 0.937
ENSLOCG00000009712 Lepisosteus oculatus ENSLOCG00000009712 I 0.937
rorb Xenopus tropicalis XB-GENE-484846 I 0.937
RORB Pan troglodytes ENSPTRG00000021025 I 0.937
ENSPSIG00000005579 Pelodiscus sinensis ENSPSIG00000005579 I 0.937
RORB Vicugna pacos ENSVPAG00000003390 I 0.937
rorb Tetraodon nigroviridis ENSTNIG00000014682 D 0.937
ENSAPLG00000007187 Anas platyrhynchos ENSAPLG00000007187 I 0.937
RORB Microcebus murinus ENSMICG00000007512 I 0.937
RORB Monodelphis domestica ENSMODG00000002046 I 0.937
ENSMODG00000004462 Monodelphis domestica ENSMODG00000004462 I 0.937
ENSOARG00000012659 Ovis aries ENSOARG00000012659 I 0.937
RORB Cavia porcellus ENSCPOG00000010612 I 0.937
RORB Ornithorhynchus anatinus ENSOANG00000011655 I 0.937
ENSMPUG00000008883 Mustela putorius furo ENSMPUG00000008883 I 0.937
Pvit_12494 Pogona vitticeps Pvit_12494 I 0.937
ENSNLEG00000001398 Nomascus leucogenys ENSNLEG00000001398 I 0.937
ENSTRUG00000002901 Takifugu rubripes ENSTRUG00000002901 I 0.937
ENSSHAG00000018693 Sarcophilus harrisii ENSSHAG00000018693 I 0.937
Rorb