NR1I2 (Ochotona princeps)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSOPRG00000010448 T304243_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nr1i2
M09316_2.00 		Mus musculus
DDRRBTYMDNNRAGKTCAN
NTGAMCTYNNHKRAVYYHH		 Misc
Kulakovskiy et al.(2013)
NR1I2_MOUSE.H11MO.0.C 		0.987 0.971
NR1I2
M03925_2.00 		Homo sapiens
RGKKCRNNVRGKKCR
YGMMCYBNNYGMMCY		 SELEX
Nitta et al.(2015)
NR1I2_1 		0.970 0.971
NR1I2
M05625_2.00 		Homo sapiens
VRGTTCRNNSRGKTCRH
DYGAMCYSNNYGAACYB		 SELEX
Yin et al.(2017)
NR1I2_eDBD_HT-SELEX 		0.970 0.971
NR1I2
M09283_2.00 		Homo sapiens
DDRRBTYMDNNRAGKTCAN
NTGAMCTYNNHKRAVYYHH		 Misc
Kulakovskiy et al.(2013)
NR1I2_HUMAN.H11MO.0.C 		0.970 0.971
NR1I2
M05626_2.00 		Homo sapiens
VRGKKCRNNVRGKKCRN
NYGMMCYBNNYGMMCYB		 SELEX
Yin et al.(2017)
NR1I2_eDBD_Methyl-HT-SELEX 		0.970 0.971
ENSPMAG00000000180
M02403_2.00 		Petromyzon marinus
RGKWCRN
NYGWMCY		 PBM
Weirauch et al.(2014)
pTH5509 		0.896 0.657
VDR
M03363_2.00 		Homo sapiens
GRGTTCAYHGRGTTCA
TGAACYCDRTGAACYC		 SELEX
Jolma et al.(2013)
VDR_1 		0.860 0.643
Vdr
M03429_2.00 		Mus musculus
RRGTTCAYHGRGTTCA
TGAACYCDRTGAACYY		 SELEX
Jolma et al.(2013)
Vdr_1 		0.860 0.643
VDR
M05877_2.00 		Homo sapiens
HRRGTTCA
TGAACYYD		 SMiLE-seq
Isakova et al.(2017)
VDR 		0.860 0.643
VDR
M09269_2.00 		Homo sapiens
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN		 Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A 		0.860 0.643
Vdr
M09315_2.00 		Mus musculus
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN		 Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A 		0.860 0.643
VDR
M09606_2.00 		Homo sapiens
NRRGGTCANNRRGKKCANNN
NNNTGMMCYYNNTGACCYYN		 Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484 		0.860 0.643
VDR
M11116_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q3 		0.860 0.643
VDR
M11117_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q6_01 		0.860 0.643
VDR
M11118_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q6 		0.860 0.643
ENSGALG00000028624
M02398_2.00 		Gallus gallus
GRGKTCAH
DTGAMCYC		 PBM
Weirauch et al.(2014)
pTH6492 		0.791 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000009537 Nuclear receptor 45 115

Links

Other Nuclear receptor family TFs
Other Ochotona princeps TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Nr1i2 Rattus norvegicus ENSRNOG00000002906 I 0.987
Nr1i2 Dipodomys ordii ENSDORG00000003966 I 0.987
Nr1i2 Mus musculus ENSMUSG00000022809 D 0.987
ENSSTOG00000014988 Ictidomys tridecemlineatus ENSSTOG00000014988 I 0.987
NR1I2 Cavia porcellus ENSCPOG00000020161 I 0.987
NR1I2 Oryctolagus cuniculus ENSOCUG00000006125 I 0.982
Myotis_brandtii_NR1I2_10031787 Myotis brandtii Myotis_brandtii_NR1I2_10031787 I 0.973
NR1I2 Myotis lucifugus ENSMLUG00000002877 I 0.973
NR1I2 Echinops telfairi ENSETEG00000018117 I 0.970
NR1I2 Homo sapiens ENSG00000144852 D 0.970
NR1I2 Pan troglodytes ENSPTRG00000015263 I 0.970
NR1I2 Macaca mulatta ENSMMUG00000001976 I 0.970
NR1I2 Equus caballus ENSECAG00000008728 I 0.970
NR1I2 Callithrix jacchus ENSCJAG00000008854 I 0.970
ENSNLEG00000005060 Nomascus leucogenys ENSNLEG00000005060 I 0.970
ENSP00000336528 Macaca fascicularis ENSP00000336528 I 0.970
NR1I2 Gorilla gorilla ENSGGOG00000007361 I 0.970
ENSTSYG00000010757 Tarsius syrichta ENSTSYG00000010757 I 0.970
NR1I2 Felis catus ENSFCAG00000006092 I 0.965
ENSAMEG00000007006 Ailuropoda melanoleuca ENSAMEG00000007006 I 0.965
NR1I2 Sus scrofa ENSSSCG00000011890 I 0.964
ENSP00000336528-D1 Bos grunniens ENSP00000336528-D1 I 0.964
NR1I2 Bos taurus ENSBTAG00000019557 I 0.962
NR1I2 Pteropus vampyrus ENSPVAG00000000884 I 0.952
NR1I2 Otolemur garnettii ENSOGAG00000006017 I 0.951
nr1i2 Danio rerio ENSDARG00000029766 I 0.944
nr1i3 Xenopus tropicalis XB-GENE-479859 I 0.942
nr1i2 Tetraodon nigroviridis ENSTNIG00000013932 I 0.940
ENSLACG00000010334 Latimeria chalumnae ENSLACG00000010334 I 0.926
ENSSHAG00000004437 Sarcophilus harrisii ENSSHAG00000004437 I 0.920
nr1i2.L Xenopus laevis XB-GENE-17336519 I 0.919
nr1i2.S Xenopus laevis XB-GENE-865343 I 0.919
NR1I2 Procavia capensis ENSPCAG00000009674 I 0.917
ENSAMXG00000008863 Astyanax mexicanus ENSAMXG00000008863 I 0.915
ENSCSAVG00000001918 Ciona savignyi ENSCSAVG00000001918 I 0.908
ENSONIG00000014385 Oreochromis niloticus ENSONIG00000014385 I 0.908
nr1i2 Takifugu rubripes ENSTRUG00000003245 I 0.905
NR1I2 Loxodonta africana ENSLAFG00000007829 I 0.905
ENSMEUG00000000113 Macropus eugenii ENSMEUG00000000113 I 0.904
Cmyd_10006875 Chelonia mydas Cmyd_10006875 I 0.899
ENSPSIG00000018108 Pelodiscus sinensis ENSPSIG00000018108 I 0.899
vdr-a Ciona intestinalis ENSCING00000020740 I 0.897
ENSPFOG00000014233 Poecilia formosa ENSPFOG00000014233 I 0.896
ENSPMAG00000000180 Petromyzon marinus ENSPMAG00000000180 D 0.896
ENSPFOG00000001655 Poecilia formosa ENSPFOG00000001655 I 0.896
vdrb Danio rerio ENSDARG00000070721 I 0.896
ENSONIG00000019378 Oreochromis niloticus ENSONIG00000019378 I 0.896
vdralpha Oryzias latipes ENSORLG00000001063 I 0.896
vdr Oryzias latipes ENSORLG00000016402 I 0.896
vdrb Tetraodon nigroviridis ENSTNIG00000007031 I 0.896
vdrb Takifugu rubripes ENSTRUG00000011576 I 0.896
ENSAMXG00000012991 Astyanax mexicanus ENSAMXG00000012991 I 0.896
VDR Anolis carolinensis ENSACAG00000013485 I 0.896
Pvit_07440 Pogona vitticeps Pvit_07440 I 0.896
ENSAMXG00000019854 Astyanax mexicanus ENSAMXG00000019854 I 0.896
ENSXMAG00000018707 Xiphophorus maculatus ENSXMAG00000018707 I 0.896
ENSGMOG00000012720 Gadus morhua ENSGMOG00000012720 I 0.896
ENSXMAG00000004608 Xiphophorus maculatus ENSXMAG00000004608 I 0.896
ENSONIG00000009200 Oreochromis niloticus ENSONIG00000009200 I 0.896
vdra Takifugu rubripes ENSTRUG00000011907 I 0.896
vdra Gasterosteus aculeatus ENSGACG00000004763 I 0.896
ENSLOCG00000005194 Lepisosteus oculatus ENSLOCG00000005194 I 0.896
ENSGMOG00000019451 Gadus morhua ENSGMOG00000019451 I 0.896
vdrb Gasterosteus aculeatus ENSGACG00000007975 I 0.896
NR1I2 Canis familiaris ENSCAFG00000011094 I 0.895
ENSLACG00000019104 Latimeria chalumnae ENSLACG00000019104 I 0.893
ENSPFOG00000007256 Poecilia formosa ENSPFOG00000007256 I 0.889
vdr.S Xenopus laevis XB-GENE-864847 I 0.876
vdr Xenopus tropicalis XB-GENE-486505 I 0.871
nr1i2 Oryzias latipes ENSORLG00000017953 I 0.870
ENSXMAG00000003990 Xiphophorus maculatus ENSXMAG00000003990 I 0.869
Afo_R013462 Aptenodytes forsteri Afo_R013462 I 0.866
ENSGALG00000026166 Gallus gallus ENSGALG00000026166 I 0.862
Aan_R009572 Calypte anna Aan_R009572 I 0.862
VDR Meleagris gallopavo ENSMGAG00000004846 I 0.862
Gfo_R005027 Geospiza fortis Gfo_R005027 I 0.862
VDR Taeniopygia guttata ENSTGUG00000017093 I 0.862
VDR Canis familiaris ENSCAFG00000009103 I 0.860
VDR Sus scrofa ENSSSCG00000020864 I 0.860
ENSCHOG00000008514 Choloepus hoffmanni ENSCHOG00000008514 I 0.860
ENSSTOG00000026741 Ictidomys tridecemlineatus ENSSTOG00000026741 I 0.860
VDR Tupaia belangeri ENSTBEG00000005717 I 0.860
ENSMEUG00000014791 Macropus eugenii ENSMEUG00000014791 I 0.860
VDR Felis catus ENSFCAG00000024594 I 0.860
ENSAMEG00000013706 Ailuropoda melanoleuca ENSAMEG00000013706 I 0.860
VDR Gorilla gorilla ENSGGOG00000016473 I 0.860
Myotis_brandtii_VDR_10022134 Myotis brandtii Myotis_brandtii_VDR_10022134 I 0.860
ENSP00000229022-D1 Bos grunniens ENSP00000229022-D1 I 0.860
ENSMMUP00000008847 Macaca fascicularis ENSMMUP00000008847 I 0.860
VDR Microcebus murinus ENSMICG00000009017 I 0.860
VDR Loxodonta africana ENSLAFG00000006418 I 0.860
VDR Tursiops truncatus ENSTTRG00000012578 I 0.860
VDR Bos taurus ENSBTAG00000016414 I 0.860
VDR Equus caballus ENSECAG00000015822 I 0.860
VDR Homo sapiens ENSG00000111424 D 0.860
VDR Otolemur garnettii ENSOGAG00000005480 I 0.860
VDR Oryctolagus cuniculus ENSOCUG00000027507 I 0.860
VDR Macaca mulatta ENSMMUG00000006727 I 0.860
ENSPANG00000011327 Papio anubis ENSPANG00000011327 I 0.860
VDR Dasypus novemcinctus ENSDNOG00000039161 I 0.860
ENSMODG00000028774 Monodelphis domestica ENSMODG00000028774 I 0.860
VDR Callithrix jacchus ENSCJAG00000015018 I 0.860
ENSMPUG00000000419 Mustela putorius furo ENSMPUG00000000419 I 0.860
Vdr Mus musculus ENSMUSG00000022479 D 0.860
VDR Myotis lucifugus ENSMLUG00000000912 I 0.860
VDR Erinaceus europaeus ENSEEUG00000011116 I 0.860
ENSNLEG00000017900 Nomascus leucogenys ENSNLEG00000017900 I 0.860
ENSCPOG00000006025 Cavia porcellus ENSCPOG00000006025 I 0.860
VDR Pteropus vampyrus ENSPVAG00000011085 I 0.860
Vdr Rattus norvegicus ENSRNOG00000054420 I 0.860
ENSOARG00000019372 Ovis aries ENSOARG00000019372 I 0.860
ENSPPYG00000004448 Pongo abelii ENSPPYG00000004448 I 0.860
ENSCSAG00000006576 Chlorocebus sabaeus ENSCSAG00000006576 I 0.860
TMUE_s0008014200 Trichuris muris TMUE_s0008014200 I 0.843
D918_02615 Trichuris suis D918_02615 I 0.843
D917_00700 Trichinella nativa D917_00700 I 0.843
EFV58098 Trichinella spiralis EFV58098 I 0.843
ENSPMAG00000003695 Petromyzon marinus ENSPMAG00000003695 I 0.836
vdra Tetraodon nigroviridis ENSTNIG00000005559 I 0.834
ENSPSIG00000004437 Pelodiscus sinensis ENSPSIG00000004437 I 0.828
Alligator_sinensis_CCG006068.1 Alligator sinensis Alligator_sinensis_CCG006068.1 I 0.827
Cmyd_10001928 Chelonia mydas Cmyd_10001928 I 0.822
ENSCSAG00000007092 Chlorocebus sabaeus ENSCSAG00000007092 I 0.812
ENSPANG00000004760 Papio anubis ENSPANG00000004760 I 0.812
ENSPPYG00000013508 Pongo abelii ENSPPYG00000013508 I 0.812
ENSACAG00000001535 Anolis carolinensis ENSACAG00000001535 I 0.794
ENSGALG00000028624 Gallus gallus ENSGALG00000028624 D 0.791
Q9DFH3_CHICK Gallus gallus Q9DFH3_CHICK I 0.791
NBR_0001980401 Nippostrongylus brasiliensis NBR_0001980401 I 0.788
ACOC_0001278301 Angiostrongylus costaricensis ACOC_0001278301 I 0.788
TELCIR_16351 Teladorsagia circumcincta TELCIR_16351 I 0.788
Ogr03312 Ophisaurus gracilis Ogr03312 I 0.787
HCOI00910600 Haemonchus contortus HCOI00910600 I 0.787
CGOC_0001446101 Cylicostephanus goldi CGOC_0001446101 I 0.787
HCOI00433800 Haemonchus contortus HCOI00433800 I 0.787
ANCCAN_11234 Ancylostoma caninum ANCCAN_11234 I 0.785
NECAME_11142 Necator americanus NECAME_11142 I 0.785
ENSOARG00000019817 Ovis aries ENSOARG00000019817 I 0.781
ANCCAN_22289 Ancylostoma caninum ANCCAN_22289 I 0.781
Pvit_09404 Pogona vitticeps Pvit_09404 I 0.777
Pvit_09406 Pogona vitticeps Pvit_09406 I 0.777
nAv.1.0.1.g02667 Acanthocheilonema viteae nAv.1.0.1.g02667 I 0.770
nOo.2.0.1.g07306 Onchocerca ochengi nOo.2.0.1.g07306 I 0.770
GPUH_0000103801 Gongylonema pulchrum GPUH_0000103801 I 0.770
EEL_0000192101 Elaeophora elaphi EEL_0000192101 I 0.770
DME_0000391501 Dracunculus medinensis DME_0000391501 I 0.770
WUBG_00356 Wuchereria bancrofti WUBG_00356 I 0.770
nLs.2.1.2.g05295 Litomosoides sigmodontis nLs.2.1.2.g05295 I 0.770
OFLC_0000511401 Onchocerca flexuosa OFLC_0000511401 I 0.770
LOAG_16842 Loa loa LOAG_16842 I 0.770
Bm2982 Brugia malayi Bm2982 I 0.770
BTMF_0001180601 Brugia timori BTMF_0001180601 I 0.770
WBGene00245913 Onchocerca volvulus WBGene00245913 I 0.770
TCNE_0001577801 Toxocara canis TCNE_0001577801 I 0.768
TCLT_0000569201 Thelazia callipaeda TCLT_0000569201 I 0.768
ASU_11275 Ascaris suum ASU_11275 I 0.768
DICVIV_05958 Dictyocaulus viviparus DICVIV_05958 I 0.762
nRc.2.0.1.g36086 Romanomermis culicivorax nRc.2.0.1.g36086 I 0.757
TELCIR_04193 Teladorsagia circumcincta TELCIR_04193 I 0.756
ENSSTOG00000003818 Ictidomys tridecemlineatus ENSSTOG00000003818 I 0.755
L889_g17804 Steinernema feltiae L889_g17804 I 0.755
L892_g24092 Steinernema scapterisci L892_g24092 I 0.755
L898_g14201 Steinernema monticolum L898_g14201 I 0.755
L596_g17693 Steinernema carpocapsae L596_g17693 I 0.755
L893_g6815 Steinernema glaseri L893_g6815 I 0.755
GJ20887 Drosophila virilis FBgn0208023 I 0.753
GI21285 Drosophila mojavensis FBgn0144015 I 0.753
GH20948 Drosophila grimshawi FBgn0128410 I 0.753
GG10830 Drosophila erecta FBgn0103135 I 0.750
ENSTSYG00000003990 Tarsius syrichta ENSTSYG00000003990 I 0.746
Alligator_sinensis_CCG005392.1 Alligator sinensis Alligator_sinensis_CCG005392.1 I 0.746