CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMEL007340
(
Heliconius melpomene
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
HMEL007340
T330607_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HMEL007340-PA
Sox
289
359
PRGRMTAYAFFVQTCREEHKKKHPEENVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKKRYELEMQNYV
HMEL007340-PA
Sox
380
448
PKRSLSAFFWFCNDERSKVKACNPEYTMGDIAKELGRRWAAADPSLKAKYDALSEQDKARYDREMTAYK
Links
Other
Sox
family TFs
Other
Heliconius melpomene
TFs
253 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIBMGA001132
Bombyx mori
BGIBMGA001132
N
0.672
AATE018776
Anopheles atroparvus
AATE018776
N
0.660
ACUA021022
Anopheles culicifacies
ACUA021022
N
0.660
AARA010318
Anopheles arabiensis
AARA010318
N
0.660
AALB006743
Anopheles albimanus
AALB006743
N
0.660
AFAF003948
Anopheles farauti
AFAF003948
N
0.660
AFUN010134
Anopheles funestus
AFUN010134
N
0.660
AEPI002924
Anopheles epiroticus
AEPI002924
N
0.660
AMIN005344
Anopheles minimus
AMIN005344
N
0.660
ADIR011701
Anopheles dirus
ADIR011701
N
0.660
AMAM015540
Anopheles maculatus
AMAM015540
N
0.660
AAEL011380
Aedes aegypti
AAEL011380
N
0.660
AGAP000005
Anopheles gambiae
AGAP000005
N
0.660
ADAC001494
Anopheles darlingi
ADAC001494
N
0.660
AMEC021909
Anopheles melas
AMEC021909
N
0.660
AMEM017336
Anopheles merus
AMEM017336
N
0.660
ASIS000124
Anopheles sinensis
ASIS000124
N
0.656
NV15664
Nasonia vitripennis
NV15664
N
0.652
LCUP007363
Lucilia cuprina
LCUP007363
N
0.647
ACYPI007949
Acyrthosiphon pisum
ACYPI007949
N
0.647
GE17263
Drosophila yakuba
FBgn0234741
N
0.645
GF19115
Drosophila ananassae
FBgn0096126
N
0.645
GK25058
Drosophila willistoni
FBgn0227017
N
0.645
GD17278
Drosophila simulans
FBgn0188840
N
0.645
GH12282
Drosophila grimshawi
FBgn0119761
N
0.645
GI10980
Drosophila mojavensis
FBgn0133743
N
0.645
GJ19445
Drosophila virilis
FBgn0206588
N
0.645
GG17955
Drosophila erecta
FBgn0110175
N
0.645
GA11488
Drosophila pseudoobscura
FBgn0071539
N
0.645
Dsp1
Drosophila melanogaster
FBgn0011764
N
0.645
CpipJ_CPIJ014043
Culex pipiens
CpipJ_CPIJ014043
N
0.642
CPIJ014043
Culex quinquefasciatus
CPIJ014043
N
0.642
SINV22586
Solenopsis invicta
SINV22586
N
0.639
Cflo_05895--XP_001121384.1_APIME
Camponotus floridanus
Cflo_05895--XP_001121384.1_APIME
N
0.639
ACEP16613
Atta cephalotes
ACEP16613
N
0.639
Hsal_13110--XP_001121384.1_APIME
Harpegnathos saltator
Hsal_13110--XP_001121384.1_APIME
N
0.639
MDOA008812
Musca domestica
MDOA008812
N
0.633
AQUA004962
Anopheles quadriannulatus
AQUA004962
N
0.626
PHUM006290
Pediculus humanus
PHUM006290
N
0.617
DAPPUDRAFT_232871
Daphnia pulex
DAPPUDRAFT_232871
N
0.609
LDEC006842
Leptinotarsa decemlineata
LDEC006842
N
0.592
YQE_03203
Dendroctonus ponderosae
YQE_03203
N
0.590
SMAR013695
Strigamia maritima
SMAR013695
N
0.581
DAPPUDRAFT_306496
Daphnia pulex
DAPPUDRAFT_306496
N
0.575
MCINX009638
Melitaea cinxia
MCINX009638
N
0.570
hmg1/2
Ciona intestinalis
ENSCING00000004075
N
0.569
tetur02g08340
Tetranychus urticae
tetur02g08340
N
0.566
tetur02g08260
Tetranychus urticae
tetur02g08260
N
0.563
ENSCSAVG00000000341
Ciona savignyi
ENSCSAVG00000000341
N
0.555
ASIS009950
Anopheles sinensis
ASIS009950
N
0.544
ISCW017350
Ixodes scapularis
ISCW017350
N
0.543
RPRC006379
Rhodnius prolixus
RPRC006379
N
0.541
AATE010886
Anopheles atroparvus
AATE010886
N
0.539
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
0.514
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
0.513
hmgb2a
Danio rerio
ENSDARG00000029722
N
0.510
ADIR000367
Anopheles dirus
ADIR000367
N
0.502
HMGB3
Oryctolagus cuniculus
ENSOCUG00000024959
N
0.500
CapteG158220
Capitella teleta
CapteG158220
N
0.500
GB47828
Apis mellifera
GB47828
N
0.498
hmgb1a
Takifugu rubripes
ENSTRUG00000008452
N
0.497
Sakowv30042012m.g
Saccoglossus kowalevskii
Sakowv30042012m.g
N
0.496
hmgb1a
Oryzias latipes
ENSORLG00000003400
N
0.494
hmgb1b
Gasterosteus aculeatus
ENSGACG00000011447
N
0.493
ENSAMXG00000014832
Astyanax mexicanus
ENSAMXG00000014832
N
0.489
ENSCJAG00000004401
Callithrix jacchus
ENSCJAG00000004401
N
0.487
LOC688583
Rattus norvegicus
ENSRNOG00000050910
N
0.486
ENSSSCG00000020770
Sus scrofa
ENSSSCG00000020770
N
0.486
ENSSSCG00000024283
Sus scrofa
ENSSSCG00000024283
N
0.486
ENSPANG00000007527
Papio anubis
ENSPANG00000007527
N
0.486
ENSMPUG00000018359
Mustela putorius furo
ENSMPUG00000018359
N
0.486
ENSCSAG00000013078
Chlorocebus sabaeus
ENSCSAG00000013078
N
0.486
ENSOARG00000010383
Ovis aries
ENSOARG00000010383
N
0.486
ENSOARG00000015955
Ovis aries
ENSOARG00000015955
N
0.486
ENSOARG00000015382
Ovis aries
ENSOARG00000015382
N
0.486
ENSCJAG00000033322
Callithrix jacchus
ENSCJAG00000033322
N
0.486
Smp_100090
Schistosoma mansoni
Smp_100090
N
0.483
SROB_0000500401
Schistosoma rodhaini
SROB_0000500401
N
0.483
TsM_000115400
Taenia solium
TsM_000115400
N
0.482
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.482
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.482
ENSCJAG00000014214
Callithrix jacchus
ENSCJAG00000014214
N
0.481
Myotis_brandtii_Hmgb2_10018437
Myotis brandtii
Myotis_brandtii_Hmgb2_10018437
N
0.481
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
0.480
ENSBTAG00000031711
Bos taurus
ENSBTAG00000031711
N
0.480
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
0.480
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
0.480
Sjc_0051340
Schistosoma japonicum
Sjc_0051340
N
0.480
hmgb1b
Takifugu rubripes
ENSTRUG00000004822
N
0.479
ENSPMAG00000007397
Petromyzon marinus
ENSPMAG00000007397
N
0.478
ENSXMAG00000011106
Xiphophorus maculatus
ENSXMAG00000011106
N
0.478
ENSPFOG00000004794
Poecilia formosa
ENSPFOG00000004794
N
0.478
SPU_005572
Strongylocentrotus purpuratus
SPU_005572
N
0.478
SMRZ_0000842001
Schistosoma margrebowiei
SMRZ_0000842001
N
0.477
SCUD_0001034301
Schistosoma curassoni
SCUD_0001034301
N
0.477
SMTD_0001017101
Schistosoma mattheei
SMTD_0001017101
N
0.477
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
0.477
T265_12733
Opisthorchis viverrini
T265_12733
N
0.477
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
0.477
SCUD_0000020101
Schistosoma curassoni
SCUD_0000020101
N
0.477
Smp_000980
Schistosoma mansoni
Smp_000980
N
0.477
A_00070
Schistosoma haematobium
A_00070
N
0.477
AAI68534
Xenopus tropicalis
AAI68534
N
0.476
D915_00818
Fasciola hepatica
D915_00818
N
0.476
ENSONIG00000019935
Oreochromis niloticus
ENSONIG00000019935
N
0.475
hmgb2b
Oryzias latipes
ENSORLG00000018687
N
0.475
hmgb2b
Takifugu rubripes
ENSTRUG00000005015
N
0.475
hmgb2b
Tetraodon nigroviridis
ENSTNIG00000004824
N
0.475
AAH44009
Xenopus laevis
AAH44009
N
0.475
HelroG157878
Helobdella robusta
HelroG157878
N
0.474
HMGB2
Macaca mulatta
ENSMMUG00000020008
N
0.472
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
0.472
LotgiG200052
Lottia gigantea
LotgiG200052
N
0.471
ENSGMOG00000010060
Gadus morhua
ENSGMOG00000010060
N
0.471
ENSPANG00000010595
Papio anubis
ENSPANG00000010595
N
0.470
HMGB2
Sus scrofa
ENSSSCG00000009704
N
0.469
Myotis_brandtii_HMGB3_10026974
Myotis brandtii
Myotis_brandtii_HMGB3_10026974
N
0.469
Sjc_0031360
Schistosoma japonicum
Sjc_0031360
N
0.468
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
0.467
SMU15016767
Schmidtea mediterranea
SMU15016767
N
0.467
T265_10726
Opisthorchis viverrini
T265_10726
N
0.466
HNAJ_0001249801
Hymenolepis nana
HNAJ_0001249801
N
0.464
HmN_000466000
Hymenolepis microstoma
HmN_000466000
N
0.464
ENSDNOG00000005537
Dasypus novemcinctus
ENSDNOG00000005537
N
0.464
ENSCJAG00000022832
Callithrix jacchus
ENSCJAG00000022832
N
0.464
HDID_0000237901
Hymenolepis diminuta
HDID_0000237901
N
0.464
ENSMPUG00000020113
Mustela putorius furo
ENSMPUG00000020113
N
0.463
ENSFCAG00000028961
Felis catus
ENSFCAG00000028961
N
0.463
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
0.462
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
0.462
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
0.462
AAH73449
Xenopus laevis
AAH73449
N
0.461
AAC59859
Xenopus laevis
AAC59859
N
0.461
ENSPANG00000023341
Papio anubis
ENSPANG00000023341
N
0.460
Aqu1.227714
Amphimedon queenslandica
Aqu1.227714
N
0.459
ENSCJAG00000007419
Callithrix jacchus
ENSCJAG00000007419
N
0.456
ENSPFOG00000004533
Poecilia formosa
ENSPFOG00000004533
N
0.455
ENSXMAG00000006844
Xiphophorus maculatus
ENSXMAG00000006844
N
0.455
hmgb1a
Danio rerio
ENSDARG00000099175
N
0.455
hmgb2.S
Xenopus laevis
XB-GENE-1000251
N
0.454
CGI_10023724
Crassostrea gigas
CGI_10023724
N
0.454
EFV57410
Trichinella spiralis
EFV57410
N
0.454
hmgb2b
Gasterosteus aculeatus
ENSGACG00000001173
N
0.454
D917_01254
Trichinella nativa
D917_01254
N
0.454
ENSAMXG00000014031
Astyanax mexicanus
ENSAMXG00000014031
N
0.453
SMU15027649
Schmidtea mediterranea
SMU15027649
N
0.453
ENSSTOG00000012404
Ictidomys tridecemlineatus
ENSSTOG00000012404
N
0.452
SMU15002907
Schmidtea mediterranea
SMU15002907
N
0.452
HelroG87827
Helobdella robusta
HelroG87827
N
0.452
NECAME_09126
Necator americanus
NECAME_09126
N
0.451
NBR_0000911001
Nippostrongylus brasiliensis
NBR_0000911001
N
0.451
TELCIR_07111
Teladorsagia circumcincta
TELCIR_07111
N
0.451
TRE_0000690301
Trichobilharzia regenti
TRE_0000690301
N
0.451
fgenesh2_pm.scaffold_24000033
Branchiostoma floridae
fgenesh2_pm.scaffold_24000033
N
0.451
ACOC_0000768601
Angiostrongylus costaricensis
ACOC_0000768601
N
0.451
DILT_0001497901
Diphyllobothrium latum
DILT_0001497901
N
0.451
SSLN_0000493501
Schistocephalus solidus
SSLN_0000493501
N
0.451
HCOI00860100
Haemonchus contortus
HCOI00860100
N
0.451
Hba_13817
Heterorhabditis bacteriophora
Hba_13817
N
0.450
ENSONIG00000005505
Oreochromis niloticus
ENSONIG00000005505
N
0.450
ENSOCUG00000016030
Oryctolagus cuniculus
ENSOCUG00000016030
N
0.446
AEPI003041
Anopheles epiroticus
AEPI003041
N
0.446
Ppa-hmg-1.2
Pristionchus pacificus
PPA02361
N
0.445
ENSMLUG00000028530
Myotis lucifugus
ENSMLUG00000028530
N
0.445
scaffold580-EXSNAP2012.5
Pristionchus exspectatus
scaffold580-EXSNAP2012.5
N
0.445
csin112095
Clonorchis sinensis
csin112095
N
0.445
BAA06440
Xenopus laevis
BAA06440
N
0.444
ENSOGAG00000031959
Otolemur garnettii
ENSOGAG00000031959
N
0.444
BGLB010942
Biomphalaria glabrata
BGLB010942
N
0.443
ENSMICG00000016224
Microcebus murinus
ENSMICG00000016224
N
0.442
PXEA_0000637001
Protopolystoma xenopodis
PXEA_0000637001
N
0.442
ENSCJAG00000005187
Callithrix jacchus
ENSCJAG00000005187
I
0.442
ENSOCUG00000023449
Oryctolagus cuniculus
ENSOCUG00000023449
N
0.441
ENSOCUG00000027747
Oryctolagus cuniculus
ENSOCUG00000027747
N
0.441
ACAC_0001052301
Angiostrongylus cantonensis
ACAC_0001052301
N
0.441
L889_g13533
Steinernema feltiae
L889_g13533
N
0.440
HelroG157726
Helobdella robusta
HelroG157726
N
0.440
hmgb1a
Tetraodon nigroviridis
ENSTNIG00000009909
N
0.439
D918_07195
Trichuris suis
D918_07195
N
0.437
TTRE_0000338301
Trichuris trichiura
TTRE_0000338301
N
0.437
ENSGMOG00000010657
Gadus morhua
ENSGMOG00000010657
N
0.437
nRc.2.0.1.g43473
Romanomermis culicivorax
nRc.2.0.1.g43473
N
0.436
hmgb3b
Danio rerio
ENSDARG00000006408
N
0.435
ENSOGAG00000029272
Otolemur garnettii
ENSOGAG00000029272
N
0.435
L893_g5947
Steinernema glaseri
L893_g5947
N
0.435
SBAD_0000405201
Soboliphyme baturini
SBAD_0000405201
N
0.434
SMU15030256
Schmidtea mediterranea
SMU15030256
N
0.434
ENSTBEG00000005874
Tupaia belangeri
ENSTBEG00000005874
N
0.434
ENSCJAG00000008378
Callithrix jacchus
ENSCJAG00000008378
N
0.433
ENSBTAG00000005098
Bos taurus
ENSBTAG00000005098
N
0.433
ENSCPOG00000003985
Cavia porcellus
ENSCPOG00000003985
N
0.433
ENSMMUG00000001275
Macaca mulatta
ENSMMUG00000001275
N
0.433
HMGB1
Microcebus murinus
ENSMICG00000006213
N
0.433
ENSSTOG00000000443
Ictidomys tridecemlineatus
ENSSTOG00000000443
N
0.433
ENSOGAG00000028411
Otolemur garnettii
ENSOGAG00000028411
N
0.433
ENSMODG00000009238
Monodelphis domestica
ENSMODG00000009238
N
0.433
ENSOARG00000017078
Ovis aries
ENSOARG00000017078
N
0.433
ENSBTAP00000049034-D1
Bos grunniens
ENSBTAP00000049034-D1
N
0.433
ENSPANG00000005029
Papio anubis
ENSPANG00000005029
N
0.433
AC135696.1
Rattus norvegicus
ENSRNOG00000058908
N
0.433
Hmg1l1
Rattus norvegicus
ENSRNOG00000034130
N
0.433
ENSECAG00000005186
Equus caballus
ENSECAG00000005186
N
0.433
ENSPANG00000011105
Papio anubis
ENSPANG00000011105
N
0.433
Hmg1l1
Rattus norvegicus
ENSRNOG00000051482
N
0.433
LOAG_04936
Loa loa
LOAG_04936
N
0.432
nAv.1.0.1.g02101
Acanthocheilonema viteae
nAv.1.0.1.g02101
N
0.432
Bm4180
Brugia malayi
Bm4180
N
0.432
nDi.2.2.2.g04979
Dirofilaria immitis
nDi.2.2.2.g04979
N
0.432
SMUV_0000232601
Syphacia muris
SMUV_0000232601
N
0.432
PEQ_0000150901
Parascaris equorum
PEQ_0000150901
N
0.432
TCLT_0000879501
Thelazia callipaeda
TCLT_0000879501
N
0.432
TCNE_0000567001
Toxocara canis
TCNE_0000567001
N
0.432
WBGene00245261
Onchocerca volvulus
WBGene00245261
N
0.432
L892_g17551
Steinernema scapterisci
L892_g17551
N
0.432
EVEC_0000577301
Enterobius vermicularis
EVEC_0000577301
N
0.432
ASU_03902
Ascaris suum
ASU_03902
N
0.432
EEL_0000068601
Elaeophora elaphi
EEL_0000068601
N
0.432
T265_14643
Opisthorchis viverrini
T265_14643
N
0.430
ENSCJAG00000008384
Callithrix jacchus
ENSCJAG00000008384
N
0.430
csin110255
Clonorchis sinensis
csin110255
N
0.430
L596_g22130
Steinernema carpocapsae
L596_g22130
N
0.429
ENSPPYG00000011668
Pongo abelii
ENSPPYG00000011668
N
0.428
AABR07025074.1
Rattus norvegicus
ENSRNOG00000032550
N
0.428
ENSOARG00000011611
Ovis aries
ENSOARG00000011611
N
0.428
SMRZ_0001808901
Schistosoma margrebowiei
SMRZ_0001808901
N
0.427
SROB_0001061001
Schistosoma rodhaini
SROB_0001061001
N
0.427
A_05510
Schistosoma haematobium
A_05510
N
0.427
SMRZ_0000146101
Schistosoma margrebowiei
SMRZ_0000146101
N
0.427
Smp_103530
Schistosoma mansoni
Smp_103530
N
0.427
SCUD_0000067701
Schistosoma curassoni
SCUD_0000067701
N
0.427
D915_15256
Fasciola hepatica
D915_15256
N
0.426
ENSMMUG00000010106
Macaca mulatta
ENSMMUG00000010106
I
0.426
SSLN_0001302101
Schistocephalus solidus
SSLN_0001302101
N
0.424
ENSTBEG00000009427
Tupaia belangeri
ENSTBEG00000009427
N
0.423
ENSOGAG00000032152
Otolemur garnettii
ENSOGAG00000032152
N
0.423
ENSMEUG00000011289
Macropus eugenii
ENSMEUG00000011289
N
0.421
HMGB1
Bos taurus
ENSBTAG00000014862
N
0.421
TMUE_s0235000800
Trichuris muris
TMUE_s0235000800
N
0.421
D917_08189
Trichinella nativa
D917_08189
N
0.421
ENSCSAG00000010707
Chlorocebus sabaeus
ENSCSAG00000010707
N
0.421
SPAL_0001030300
Strongyloides papillosus
SPAL_0001030300
N
0.420
SSTP_0000371800
Strongyloides stercoralis
SSTP_0000371800
N
0.420
PTRK_0000986200
Parastrongyloides trichosuri
PTRK_0000986200
N
0.420
ENSGGOG00000026945
Gorilla gorilla
ENSGGOG00000026945
N
0.420
SVE_0494300
Strongyloides venezuelensis
SVE_0494300
N
0.420
hmg-1.2
Caenorhabditis elegans
WBGene00001972
N
0.419
ENSPANG00000025478
Papio anubis
ENSPANG00000025478
N
0.419
CJA09678
Caenorhabditis japonica
CJA09678
N
0.419
CBN17977
Caenorhabditis brenneri
CBN17977
N
0.419
CBG17468
Caenorhabditis briggsae
CBG17468
N
0.419
ENSOGAG00000030563
Otolemur garnettii
ENSOGAG00000030563
N
0.418
DME_0001055201
Dracunculus medinensis
DME_0001055201
N
0.418
Myotis_brandtii_Hmgb1_10003213
Myotis brandtii
Myotis_brandtii_Hmgb1_10003213
N
0.418