LPERR05G14130 (Leersia perrieri)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 LPERR05G14130 T002606_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-6
M00717_2.00 		Arabidopsis thaliana
NBGCYGNH
DNCRGCVN		 PBM
Chang et al.(2013)
pTH7225 		0.800 0.900
RAP2-6
M00841_2.00 		Arabidopsis thaliana
NGCCGHHNNN
NNNDDCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.6 		0.800 0.900
RAP2-6
M06579_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYMD
HKRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
RAP26_col_a 		0.800 0.900
RAP2-6
M06580_2.00 		Arabidopsis thaliana
CGCCGY
RCGGCG		 Dap-seq
OMalley et al.(2016)
RAP26_colamp_a 		0.800 0.900
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.789 0.860
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.789 0.860
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.730 0.820
ABR1
M01051_2.00 		Arabidopsis thaliana
NYGSCGSCVNN
NNBGSCGSCRN		 PBM
Sullivan et al.(2014)
pTH7383 		0.727 0.860
ABR1
M06684_2.00 		Arabidopsis thaliana
CKCCGCCGYMDHHNYHNHH
DDNDRNDDHKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ABR1_col_a 		0.727 0.860
ABR1
M06685_2.00 		Arabidopsis thaliana
HNNHDSCGCCGCMAWHNNNNN
NNNNNDWTKGCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ABR1_colamp_a 		0.727 0.860
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.725 0.840
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.725 0.840
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.725 0.840
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.724 0.780
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.712 0.820
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.707 0.800
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.692 0.800
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.692 0.800
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.692 0.800
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.685 0.760
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.683 0.720
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.682 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR05G14130.1 AP2 132 183

Links

Other AP2 family TFs
Other Leersia perrieri TFs

630 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava26894.m1 Manihot esculenta cassava26894.m1 N
Ca_22597 Cicer arietinum Ca_22597 N
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N
GLYMA06G45520 Glycine max GLYMA06G45520 N
GLYMA06G45547 Glycine max GLYMA06G45547 N
GLYMA06G45554 Glycine max GLYMA06G45554 I
GLYMA12G11330 Glycine max GLYMA12G11330 I
GLYMA12G11340 Glycine max GLYMA12G11340 N
GLYMA12G11390 Glycine max GLYMA12G11390 N
GLYMA12G11490 Glycine max GLYMA12G11490 N
GLYMA12G32530 Glycine max GLYMA12G32530 I
GLYMA12G32541 Glycine max GLYMA12G32541 N
GLYMA13G37903 Glycine max GLYMA13G37903 I
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I
Lus10018547.g Linum usitatissimum Lus10018547.g N
Lus10031607.g Linum usitatissimum Lus10031607.g N
Lus10033738.g Linum usitatissimum Lus10033738.g N
Lus10039734.g Linum usitatissimum Lus10039734.g I
Lus10039735.g Linum usitatissimum Lus10039735.g I
MDP0000155426 Malus domestica MDP0000155426 I
MDP0000407613 Malus domestica MDP0000407613 N
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N
MTR_2g089420 Medicago truncatula MTR_2g089420 N
MTR_2g089450 Medicago truncatula MTR_2g089450 N
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I
PK24260.1 Cannabis sativa PK24260.1 N
Pm015302 Prunus mume Pm015302 N
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I
Solyc07g055000.1 Solanum lycopersicum Solyc07g055000.1 N
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N
TCM_007865 Theobroma cacao TCM_007865 I
TCM_030020 Theobroma cacao TCM_030020 I
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I