CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA09G30040
(
Glycine max
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
GLYMA09G30040
T024616_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA09G30040.4
BBR
1
282
MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLAGTNGAFHHRDIGGMPQATYPMEYMRDAWISQRDKYMNMIPTNHNYGGIPETSSAHQIQMIQAPELPKEEKPVEEAPVVEKANGTRKKRQGPKVPKSPRAKKPKMGPRAPKDENAPSVQRARVPKKTTEIVINGIDMDISSIPVPVCSCTGVHQQCYKWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Glycine max
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30032.m000462
Ricinus communis
30032.m000462
N
0.000
30076.m004471
Ricinus communis
30076.m004471
I
0.000
Aquca_037_00291
Aquilegia coerulea
Aquca_037_00291
I
0.000
Aquca_072_00063
Aquilegia coerulea
Aquca_072_00063
I
0.000
ARF31
Arabidopsis thaliana
AT2G36080
N
0.000
AT3G11580
Arabidopsis thaliana
AT3G11580
N
0.000
AT5G06250
Arabidopsis thaliana
AT5G06250
N
0.000
BGIOSGA034469
Oryza indica
BGIOSGA034469
N
0.000
BGIOSGA036599
Oryza indica
BGIOSGA036599
N
0.000
Bo01079s020
Brassica oleracea
Bo01079s020
N
0.000
Bo3g064320
Brassica oleracea
Bo3g064320
N
0.000
Bo4g035110
Brassica oleracea
Bo4g035110
N
0.000
Bo5g136360
Brassica oleracea
Bo5g136360
N
0.000
Bo9g176470
Brassica oleracea
Bo9g176470
N
0.000
Bostr.13129s0349
Boechera stricta
Bostr.13129s0349
N
0.000
Bostr.19424s1090
Boechera stricta
Bostr.19424s1090
N
0.000
Bostr.23794s0488
Boechera stricta
Bostr.23794s0488
N
0.000
Bra001411
Brassica rapa
Bra001411
N
0.000
Bra005301
Brassica rapa
Bra005301
N
0.000
Bra017262
Brassica rapa
Bra017262
N
0.000
Bra034828
Brassica rapa
Bra034828
N
0.000
BRADI4G25170
Brachypodium distachyon
BRADI4G25170
N
0.000
BRADI4G42167
Brachypodium distachyon
BRADI4G42167
N
0.000
Cagra.0993s0119
Capsella grandiflora
Cagra.0993s0119
N
0.000
Cagra.1655s0012
Capsella grandiflora
Cagra.1655s0012
N
0.000
Cagra.2117s0038
Capsella grandiflora
Cagra.2117s0038
I
0.000
Carubv10001689m.g
Capsella rubella
Carubv10001689m.g
I
0.000
Carubv10014376m.g
Capsella rubella
Carubv10014376m.g
N
0.000
Carubv10023925m.g
Capsella rubella
Carubv10023925m.g
N
0.000
cassava19218.valid.m1
Manihot esculenta
cassava19218.valid.m1
N
0.000
cassava3990.m1
Manihot esculenta
cassava3990.m1
N
0.000
Ca_00826
Cicer arietinum
Ca_00826
N
0.000
Ca_25633
Cicer arietinum
Ca_25633
I
0.000
Ciclev10012008m.g
Citrus clementina
Ciclev10012008m.g
I
0.000
Ciclev10020450m.g
Citrus clementina
Ciclev10020450m.g
I
0.000
Cla017937
Citrullus lanatus
Cla017937
I
0.000
Cucsa.241440
Cucumis sativus
Cucsa.241440
I
0.000
Eucgr.A02625
Eucalyptus grandis
Eucgr.A02625
N
0.000
evm.TU.contig_29173.1
Carica papaya
evm.TU.contig_29173.1
I
0.000
evm.TU.supercontig_37.108
Carica papaya
evm.TU.supercontig_37.108
I
0.000
evm.TU.supercontig_57.71
Carica papaya
evm.TU.supercontig_57.71
I
0.000
F775_02500
Aegilops tauschii
F775_02500
N
0.000
fgenesh2_kg.6__566__AT5G06250.2
Arabidopsis lyrata
fgenesh2_kg.6__566__AT5G06250.2
N
0.000
gene01855-v1.0-hybrid
Fragaria vesca
gene01855-v1.0-hybrid
I
0.000
gene15627-v1.0-hybrid
Fragaria vesca
gene15627-v1.0-hybrid
I
0.000
GLYMA02G36090
Glycine max
GLYMA02G36090
I
0.000
GLYMA03G35700
Glycine max
GLYMA03G35700
N
0.000
GLYMA03G42301
Glycine max
GLYMA03G42301
I
0.000
GLYMA10G08871
Glycine max
GLYMA10G08871
I
0.000
GLYMA19G38340
Glycine max
GLYMA19G38340
N
0.000
GLYMA19G45090
Glycine max
GLYMA19G45090
I
0.000
Gorai.001G150200
Gossypium raimondii
Gorai.001G150200
I
0.000
Gorai.002G237900
Gossypium raimondii
Gorai.002G237900
I
0.000
Gorai.006G152400
Gossypium raimondii
Gorai.006G152400
N
0.000
Gorai.009G399000
Gossypium raimondii
Gorai.009G399000
N
0.000
GRMZM2G142999
Zea mays
GRMZM2G142999
N
0.000
GRMZM2G328742
Zea mays
GRMZM2G328742
N
0.000
GRMZM5G805685
Zea mays
GRMZM5G805685
N
0.000
GSMUA_Achr6G13140_001
Musa acuminata
GSMUA_Achr6G13140_001
N
0.000
GSMUA_Achr6G35600_001
Musa acuminata
GSMUA_Achr6G35600_001
N
0.000
GSMUA_Achr9G02600_001
Musa acuminata
GSMUA_Achr9G02600_001
I
0.000
LjSGA_011266.1
Lotus japonicus
LjSGA_011266.1
N
0.000
LjT15D16.50.nc
Lotus japonicus
LjT15D16.50.nc
I
0.000
LPERR03G01560
Leersia perrieri
LPERR03G01560
N
0.000
LPERR11G03050
Leersia perrieri
LPERR11G03050
N
0.000
LPERR12G03290
Leersia perrieri
LPERR12G03290
N
0.000
Lus10004226.g
Linum usitatissimum
Lus10004226.g
N
0.000
Lus10021326.g
Linum usitatissimum
Lus10021326.g
N
0.000
MDP0000229742
Malus domestica
MDP0000229742
N
0.000
mgf019085m
Mimulus guttatus
mgf019085m
N
0.000
MLOC_11014
Hordeum vulgare
MLOC_11014
N
0.000
MLOC_56530
Hordeum vulgare
MLOC_56530
N
0.000
MTR_1g058350
Medicago truncatula
MTR_1g058350
N
0.000
MTR_7g105370
Medicago truncatula
MTR_7g105370
N
0.000
MTR_8g023990
Medicago truncatula
MTR_8g023990
I
0.000
OB11G12920
Oryza brachyantha
OB11G12920
N
0.000
OB12G13420
Oryza brachyantha
OB12G13420
N
0.000
OBART11G03590
Oryza barthii
OBART11G03590
N
0.000
OBART12G03490
Oryza barthii
OBART12G03490
N
0.000
OGLUM11G03240
Oryza glumaepatula
OGLUM11G03240
N
0.000
OGLUM12G04180
Oryza glumaepatula
OGLUM12G04180
N
0.000
OLONG_005139
Oryza longistaminata
OLONG_005139
N
0.000
OMERI11G03310
Oryza meridionalis
OMERI11G03310
N
0.000
OMERI12G01740
Oryza meridionalis
OMERI12G01740
N
0.000
ONIVA07G22860
Oryza nivara
ONIVA07G22860
N
0.000
ONIVA12G03130
Oryza nivara
ONIVA12G03130
N
0.000
OPUNC11G03320
Oryza punctata
OPUNC11G03320
N
0.000
OPUNC12G03300
Oryza punctata
OPUNC12G03300
N
0.000
orange1.1g015743m.g
Citrus sinensis
orange1.1g015743m.g
I
0.000
orange1.1g019261m.g
Citrus sinensis
orange1.1g019261m.g
I
0.000
ORGLA11G0033600
Oryza glaberrima
ORGLA11G0033600
N
0.000
ORGLA12G0033700
Oryza glaberrima
ORGLA12G0033700
N
0.000
ORUFI11G03500
Oryza rufipogon
ORUFI11G03500
N
0.000
ORUFI12G03970
Oryza rufipogon
ORUFI12G03970
N
0.000
OS11G0156000
Oryza sativa
OS11G0156000
N
0.000
Pavir.Ca00165
Panicum virgatum
Pavir.Ca00165
N
0.000
Pavir.Cb02052
Panicum virgatum
Pavir.Cb02052
N
0.000
Pavir.Ha01761
Panicum virgatum
Pavir.Ha01761
N
0.000
Pavir.Hb01814
Panicum virgatum
Pavir.Hb01814
N
0.000
PGSC0003DMG400008936
Solanum tuberosum
PGSC0003DMG400008936
N
0.000
PGSC0003DMG400028159
Solanum tuberosum
PGSC0003DMG400028159
N
0.000
PK04952.1
Cannabis sativa
PK04952.1
I
0.000
POPTR_0001s45650
Populus trichocarpa
POPTR_0001s45650
I
0.000
POPTR_0006s22460
Populus trichocarpa
POPTR_0006s22460
N
0.000
POPTR_0011s15270
Populus trichocarpa
POPTR_0011s15270
I
0.000
POPTR_0016s07540
Populus trichocarpa
POPTR_0016s07540
N
0.000
PRUPE_ppa019539mg
Prunus persica
PRUPE_ppa019539mg
I
0.000
SapurV1A.0285s0040
Salix purpurea
SapurV1A.0285s0040
I
0.000
SapurV1A.0974s0140
Salix purpurea
SapurV1A.0974s0140
N
0.000
SapurV1A.1211s0020
Salix purpurea
SapurV1A.1211s0020
N
0.000
SapurV1A.1586s0010
Salix purpurea
SapurV1A.1586s0010
N
0.000
Sb01g030520
Sorghum bicolor
Sb01g030520
N
0.000
Sb05g003450
Sorghum bicolor
Sb05g003450
N
0.000
Sb08g003550
Sorghum bicolor
Sb08g003550
N
0.000
scaffold_301330.1
Arabidopsis lyrata
scaffold_301330.1
N
0.000
scaffold_402221.1
Arabidopsis lyrata
scaffold_402221.1
N
0.000
Si010849m.g
Setaria italica
Si010849m.g
N
0.000
Si027632m.g
Setaria italica
Si027632m.g
N
0.000
Solyc09g010230.1
Solanum lycopersicum
Solyc09g010230.1
N
0.000
Solyc10g083210.1
Solanum lycopersicum
Solyc10g083210.1
N
0.000
TCM_005014
Theobroma cacao
TCM_005014
I
0.000
TCM_022729
Theobroma cacao
TCM_022729
N
0.000
Thhalv10015675m.g
Eutrema salsugineum
Thhalv10015675m.g
I
0.000
Thhalv10017156m.g
Eutrema salsugineum
Thhalv10017156m.g
N
0.000
Thhalv10021305m.g
Eutrema salsugineum
Thhalv10021305m.g
N
0.000
Traes_2AL_25382F498
Triticum aestivum
Traes_2AL_25382F498
N
0.000
Traes_2BL_5ECD53274
Triticum aestivum
Traes_2BL_5ECD53274
N
0.000
Traes_2DL_2128A95BD
Triticum aestivum
Traes_2DL_2128A95BD
N
0.000
Traes_4AL_4F2E6EF28
Triticum aestivum
Traes_4AL_4F2E6EF28
N
0.000
Traes_4BS_5FECB39FA
Triticum aestivum
Traes_4BS_5FECB39FA
N
0.000
Traes_4DS_E6210A614
Triticum aestivum
Traes_4DS_E6210A614
N
0.000
Traes_5BL_B98E347A8
Triticum aestivum
Traes_5BL_B98E347A8
N
0.000
Traes_5DL_CACDF70D6
Triticum aestivum
Traes_5DL_CACDF70D6
N
0.000
VIT_02s0025g03000
Vitis vinifera
VIT_02s0025g03000
I
0.000
VIT_08s0007g02810
Vitis vinifera
VIT_08s0007g02810
N
0.000