Bo7g040830 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo7g040830 T031243_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH104
M01706_2.00 		Arabidopsis thaliana
GGCACGTGCC
GGCACGTGCC		 PBM
Weirauch et al.(2014)
pTH7365 		0.856 0.765
BHLH104
M06737_2.00 		Arabidopsis thaliana
GVCACGTGBMDDBHNSDNBH
DVNHSNDVHHKVCACGTGBC		 Dap-seq
OMalley et al.(2016)
bHLH104_col_b 		0.856 0.765
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g040830.1 bHLH 220 270

Links

Other bHLH family TFs
Other Brassica oleracea TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH104 Arabidopsis thaliana AT4G14410 D 0.856
Bo1g102270 Brassica oleracea Bo1g102270 I 0.879
Bo4g126940 Brassica oleracea Bo4g126940 I 0.879
Bostr.0597s0053 Boechera stricta Bostr.0597s0053 I 0.856
Bra014923 Brassica rapa Bra014923 I 0.914
Bra041033 Brassica rapa Bra041033 I 0.859
Cagra.1718s0002 Capsella grandiflora Cagra.1718s0002 I 0.856
Carubv10005335m.g Capsella rubella Carubv10005335m.g I 0.856
Ciclev10005872m.g Citrus clementina Ciclev10005872m.g I 0.863
Cla021854 Citrullus lanatus Cla021854 I 0.839
Cucsa.255290 Cucumis sativus Cucsa.255290 I 0.839
Eucgr.H00174 Eucalyptus grandis Eucgr.H00174 N 0.839
evm.TU.supercontig_44.78 Carica papaya evm.TU.supercontig_44.78 I 0.876
bHLH104 Arabidopsis lyrata fgenesh2_kg.7__2895__AT4G14410.2 I 0.856
gene11436-v1.0-hybrid Fragaria vesca gene11436-v1.0-hybrid I 0.879
Lus10021199.g Linum usitatissimum Lus10021199.g N 0.839
Lus10021876.g Linum usitatissimum Lus10021876.g N 0.839
Lus10022186.g Linum usitatissimum Lus10022186.g I 0.839
Lus10041148.g Linum usitatissimum Lus10041148.g N 0.839
orange1.1g028060m.g Citrus sinensis orange1.1g028060m.g I 0.863
POPTR_0010s08360 Populus trichocarpa POPTR_0010s08360 N 0.852
PRUPE_ppa011217mg Prunus persica PRUPE_ppa011217mg I 0.863
SapurV1A.0007s0940 Salix purpurea SapurV1A.0007s0940 N 0.852
SapurV1A.0292s0060 Salix purpurea SapurV1A.0292s0060 N 0.852
Thhalv10025927m.g Eutrema salsugineum Thhalv10025927m.g I 0.856