ENSPMAG00000004688 (Petromyzon marinus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPMAG00000004688 T106661_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EGR2
M00233_2.00 		Homo sapiens
HDCCCMCDBN
NVHGKGGGHD		 PBM
Barrera et al.(2016)
EGR2_REF 		0.781 0.870
Egr2
M00778_2.00 		Mus musculus
YRCCCMCGYN
NRCGKGGGYR		 PBM
Weirauch et al.(2013)
pTH3091 		0.781 0.870
EGR2
M02885_2.00 		Homo sapiens
MCGCCCACGCD
HGCGTGGGCGK		 SELEX
Jolma et al.(2013)
EGR2_1 		0.781 0.870
EGR2
M02886_2.00 		Homo sapiens
NNMCGCCCACGCDNN
NNHGCGTGGGCGKNN		 SELEX
Jolma et al.(2013)
EGR2_2 		0.781 0.870
EGR2
M04439_2.00 		Homo sapiens
HMCRCCCACGCNN
NNGCGTGGGYGKD		 SELEX
Yin et al.(2017)
EGR2_FL_HT-SELEX 		0.781 0.870
EGR2
M08302_2.00 		Homo sapiens
CDCCCMCDC
GHGKGGGHG		 ChIP-seq
Schmitges et al.(2016)
P11161_1-3.RCADE 		0.781 0.870
EGR2
M08884_2.00 		Homo sapiens
YYCCDCCCMCDCHYHYHY
RDRDRDGHGKGGGHGGRR		 Misc
Kulakovskiy et al.(2013)
EGR2_HUMAN.H11MO.0.A 		0.781 0.870
Egr2
M08994_2.00 		Mus musculus
BHYCCDCCCMCDCN
NGHGKGGGHGGRDV		 Misc
Kulakovskiy et al.(2013)
EGR2_MOUSE.H11MO.0.A 		0.781 0.870
Egr2
M09515_2.00 		Mus musculus
NMCRCCCACDSN
NSHGTGGGYGKN		 Misc
Heinz et al.(2010)
Thymocytes-Egr2_GSE34254 		0.781 0.870
EGR2
M10197_2.00 		Homo sapiens
MCGCCYACGCAH
DTGCGTRGGCGK		 Transfac
Matys et al.(2006)
V$EGR2_01 		0.781 0.870
EGR2
M10198_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR2_Q4 		0.781 0.870
EGR2
M10199_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR2_Q6 		0.781 0.870
EGR2
M04440_2.00 		Homo sapiens
NMCGCCCACRCRN
NYGYGTGGGCGKN		 SELEX
Yin et al.(2017)
EGR2_FL_Methyl-HT-SELEX 		0.781 0.870
EGR2
M00232_2.00 		Homo sapiens
NHMCGCCYNN
NNRGGCGKDN		 PBM
Barrera et al.(2016)
EGR2_R409W 		0.780 0.855
Egr3
M00776_2.00 		Mus musculus
HHDCCCMCDN
NHGKGGGHDD		 PBM
Weirauch et al.(2013)
pTH2820 		0.765 0.855
EGR3
M02915_2.00 		Homo sapiens
NHMCGCCCMCGCAHN
NDTGCGKGGGCGKDN		 SELEX
Jolma et al.(2013)
EGR3_1 		0.765 0.855
Egr3
M02931_2.00 		Mus musculus
HMCGCCCACGCAHWN
NWDTGCGTGGGCGKD		 SELEX
Jolma et al.(2013)
Egr3_1 		0.765 0.855
EGR3
M04583_2.00 		Homo sapiens
HMCGCCCACGCRH
DYGCGTGGGCGKD		 SELEX
Yin et al.(2017)
EGR3_FL_HT-SELEX 		0.765 0.855
EGR3
M08349_2.00 		Homo sapiens
CDCCYCCDC
GHGGRGGHG		 ChIP-seq
Schmitges et al.(2016)
Q06889_1-3.RCADE 		0.765 0.855
EGR3
M10279_2.00 		Homo sapiens
MCGCCYACGCWN
NWGCGTRGGCGK		 Transfac
Matys et al.(2006)
V$EGR3_01 		0.765 0.855
EGR3
M10280_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR3_Q3 		0.765 0.855
EGR3
M10281_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR3_Q6 		0.765 0.855
EGR3
M04584_2.00 		Homo sapiens
NMCGCCCACGCRH
DYGCGTGGGCGKN		 SELEX
Yin et al.(2017)
EGR3_FL_Methyl-HT-SELEX 		0.765 0.855
Egr1
M01864_2.00 		Mus musculus
CCCMCGYNN
NNRCGKGGG		 PBM
Weirauch et al.(2014)
pTH5337 		0.761 0.841
Egr1
M00375_2.00 		Mus musculus
NCCYMCDNN
NNHGKRGGN		 PBM
Berger et al.(2006)
Zif268 		0.761 0.841
EGR1
M02883_2.00 		Homo sapiens
NMCGCCCMCGCANN
NNTGCGKGGGCGKN		 SELEX
Jolma et al.(2013)
EGR1_1 		0.761 0.841
EGR1
M02884_2.00 		Homo sapiens
HMCGCCCACGCAHW
WDTGCGTGGGCGKD		 SELEX
Jolma et al.(2013)
EGR1_2 		0.761 0.841
Egr1
M02932_2.00 		Mus musculus
HHMCGCCCMCBCAHHH
DDDTGVGKGGGCGKDD		 SELEX
Jolma et al.(2013)
Egr1_1 		0.761 0.841
EGR1
M04437_2.00 		Homo sapiens
NNCRCCCMCRCNN
NNGYGKGGGYGNN		 SELEX
Yin et al.(2017)
EGR1_eDBD_HT-SELEX 		0.761 0.841
Egr1
M05860_2.00 		Mus musculus
NNMCRCCCMCGCN
NGCGKGGGYGKNN		 SMiLE-seq
Isakova et al.(2017)
EGR1 		0.761 0.841
EGR1
M07927_2.00 		Homo sapiens
NVBNNNNBCCGCCCMCGCNB
VNGCGKGGGCGGVNNNNVBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_EGR1_HudsonAlpha 		0.761 0.841
EGR1
M07928_2.00 		Homo sapiens
BNCCGCCCMCGCNBB
VVNGCGKGGGCGGNV		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_EGR1_HudsonAlpha 		0.761 0.841
EGR1
M07929_2.00 		Homo sapiens
NNNNNNBNNCCRCCCMCGCN
NGCGKGGGYGGNNVNNNNNN		 ChIP-seq
Gerstein et al.(2012)
K562_EGR1_HudsonAlpha 		0.761 0.841
EGR1
M08882_2.00 		Homo sapiens
BHNCCDCCCMCDCHBNB
VNVDGHGKGGGHGGNDV		 Misc
Kulakovskiy et al.(2013)
EGR1_HUMAN.H11MO.0.A 		0.761 0.841
Egr1
M08996_2.00 		Mus musculus
YYCCRCCCMCGCNB
VNGCGKGGGYGGRR		 Misc
Kulakovskiy et al.(2013)
EGR1_MOUSE.H11MO.0.A 		0.761 0.841
EGR1
M09506_2.00 		Homo sapiens
CRCCCMCRCA
TGYGKGGGYG		 Misc
Heinz et al.(2010)
K562-Egr1_GSE32465 		0.761 0.841
EGR1
M10188_2.00 		Homo sapiens
MCGCCYACGCAW
WTGCGTRGGCGK		 Transfac
Matys et al.(2006)
V$EGR1_01 		0.761 0.841
EGR1
M10189_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_02 		0.761 0.841
EGR1
M10190_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_09 		0.761 0.841
EGR1
M10191_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_11 		0.761 0.841
EGR1
M10192_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_12 		0.761 0.841
EGR1
M10193_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_13 		0.761 0.841
EGR1
M10194_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_15 		0.761 0.841
EGR1
M10195_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_Q3 		0.761 0.841
EGR1
M10196_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_Q6 		0.761 0.841
EGR1
M04438_2.00 		Homo sapiens
NHCDCCCMCNYNN
NNRNGKGGGHGDN		 SELEX
Yin et al.(2017)
EGR1_eDBD_Methyl-HT-SELEX 		0.761 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPMAP00000005136 C2H2 ZF 172 196
ENSPMAP00000005136 C2H2 ZF 202 224
ENSPMAP00000005136 C2H2 ZF 230 252

Links

Other C2H2 ZF family TFs
Other Petromyzon marinus TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29917.m001977 Ricinus communis 29917.m001977 I
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I
MYB118 Arabidopsis thaliana AT3G27785 D
MYB98 Arabidopsis thaliana AT4G18770 D
BGIOSGA022369 Oryza indica BGIOSGA022369 I
BGIOSGA036541 Oryza indica BGIOSGA036541 I
Bo1g019910 Brassica oleracea Bo1g019910 I
Bo2g028290 Brassica oleracea Bo2g028290 I
Bo3g018490 Brassica oleracea Bo3g018490 I
Bo3g157300 Brassica oleracea Bo3g157300 I
Bo7g106240 Brassica oleracea Bo7g106240 I
Bostr.0556s0457 Boechera stricta Bostr.0556s0457 I
Bostr.30275s0352 Boechera stricta Bostr.30275s0352 I
Bra006744 Brassica rapa Bra006744 I
Bra012579 Brassica rapa Bra012579 I
Bra013346 Brassica rapa Bra013346 I
Bra020346 Brassica rapa Bra020346 I
Bra020992 Brassica rapa Bra020992 I
Bra025299 Brassica rapa Bra025299 I
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I
Cagra.11216s0002 Capsella grandiflora Cagra.11216s0002 I
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N
Cagra.4306s0015 Capsella grandiflora Cagra.4306s0015 I
Carubv10003695m.g Capsella rubella Carubv10003695m.g N
Carubv10006734m.g Capsella rubella Carubv10006734m.g I
Carubv10018693m.g Capsella rubella Carubv10018693m.g I
Carubv10028458m.g Capsella rubella Carubv10028458m.g I
cassava19706.m1 Manihot esculenta cassava19706.m1 I
cassava26507.m1 Manihot esculenta cassava26507.m1 N
cassava33974.m1 Manihot esculenta cassava33974.m1 I
cassava9008.m1 Manihot esculenta cassava9008.m1 I
Ca_07482 Cicer arietinum Ca_07482 I
Ca_17087 Cicer arietinum Ca_17087 I
Ca_17294 Cicer arietinum Ca_17294 I
Ca_19427 Cicer arietinum Ca_19427 I
Ciclev10017526m.g Citrus clementina Ciclev10017526m.g I
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N
Cla010586 Citrullus lanatus Cla010586 I
Cla019490 Citrullus lanatus Cla019490 I
Cucsa.196850 Cucumis sativus Cucsa.196850 I
Eucgr.B00300 Eucalyptus grandis Eucgr.B00300 I
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I
F775_22212 Aegilops tauschii F775_22212 I
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I
MYB118 Arabidopsis lyrata fgenesh2_kg.5__560__AT3G27785.1 I
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I
GLYMA05G02300 Glycine max GLYMA05G02300 I
GLYMA06G19280 Glycine max GLYMA06G19280 I
GLYMA16G07927 Glycine max GLYMA16G07927 I
Gorai.001G263600 Gossypium raimondii Gorai.001G263600 I
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I
GRMZM2G302549 Zea mays GRMZM2G302549 I
GRMZM5G870592 Zea mays GRMZM5G870592 I
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N
GSMUA_Achr3G09050_001 Musa acuminata GSMUA_Achr3G09050_001 N
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I
GSMUA_Achr6G06490_001 Musa acuminata GSMUA_Achr6G06490_001 I
GSMUA_Achr6G33700_001 Musa acuminata GSMUA_Achr6G33700_001 N
LPERR06G03780 Leersia perrieri LPERR06G03780 I
LPERR12G04190 Leersia perrieri LPERR12G04190 I
Lus10002384.g Linum usitatissimum Lus10002384.g I
Lus10018220.g Linum usitatissimum Lus10018220.g N
Lus10027695.g Linum usitatissimum Lus10027695.g I
Lus10039966.g Linum usitatissimum Lus10039966.g I
Lus10040684.g Linum usitatissimum Lus10040684.g N
Lus10042111.g Linum usitatissimum Lus10042111.g I
MDP0000199939 Malus domestica MDP0000199939 I
MDP0000215359 Malus domestica MDP0000215359 I
MDP0000319656 Malus domestica MDP0000319656 I
mg025334m Mimulus guttatus mg025334m I
mgf023372m Mimulus guttatus mgf023372m I
mgf024290m Mimulus guttatus mgf024290m I
MTR_3g077650 Medicago truncatula MTR_3g077650 I
MTR_4g105660 Medicago truncatula MTR_4g105660 N
MTR_5g049190 Medicago truncatula MTR_5g049190 I
OB06G13860 Oryza brachyantha OB06G13860 I
OB12G14410 Oryza brachyantha OB12G14410 I
OBART06G04170 Oryza barthii OBART06G04170 I
OBART12G04480 Oryza barthii OBART12G04480 I
OBART12G04500 Oryza barthii OBART12G04500 I
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I
OGLUM12G05330 Oryza glumaepatula OGLUM12G05330 I
OLONG_008158 Oryza longistaminata OLONG_008158 I
OLONG_010000 Oryza longistaminata OLONG_010000 I
OMERI06G04840 Oryza meridionalis OMERI06G04840 I
OMERI12G02760 Oryza meridionalis OMERI12G02760 I
ONIVA06G05390 Oryza nivara ONIVA06G05390 I
ONIVA12G04220 Oryza nivara ONIVA12G04220 I
OPUNC06G03990 Oryza punctata OPUNC06G03990 I
OPUNC12G04510 Oryza punctata OPUNC12G04510 I
orange1.1g044021m.g Citrus sinensis orange1.1g044021m.g I
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I
ORGLA12G0042300 Oryza glaberrima ORGLA12G0042300 I
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I
ORUFI12G05180 Oryza rufipogon ORUFI12G05180 I
OS06G0162700 Oryza sativa OS06G0162700 I
Pavir.J02497 Panicum virgatum Pavir.J02497 I
Pavir.J02718 Panicum virgatum Pavir.J02718 I
Pavir.J25000 Panicum virgatum Pavir.J25000 I
Pavir.J37434 Panicum virgatum Pavir.J37434 I
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N
PGSC0003DMG400018092 Solanum tuberosum PGSC0003DMG400018092 I
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I
Pm000541 Prunus mume Pm000541 I
Pm015681 Prunus mume Pm015681 I
Pm024743 Prunus mume Pm024743 I
MYB118 Populus trichocarpa POPTR_0001s35140 I
POPTR_0005s12050 Populus trichocarpa POPTR_0005s12050 I
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I
PRUPE_ppa019507mg Prunus persica PRUPE_ppa019507mg I
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I
SapurV1A.0396s0170 Salix purpurea SapurV1A.0396s0170 I
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I
Sb01g005100 Sorghum bicolor Sb01g005100 I
MYB98 Arabidopsis lyrata scaffold_702543.1 I
Si039046m.g Setaria italica Si039046m.g I
Solyc03g112890.1 Solanum lycopersicum Solyc03g112890.1 I
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I
TCM_012087 Theobroma cacao TCM_012087 I
TCM_016909 Theobroma cacao TCM_016909 I
TCM_041651 Theobroma cacao TCM_041651 N
Thhalv10005564m.g Eutrema salsugineum Thhalv10005564m.g I
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I
Thhalv10026824m.g Eutrema salsugineum Thhalv10026824m.g I
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I
Traes_7DS_E27ECBC6E Triticum aestivum Traes_7DS_E27ECBC6E I
TRIUR3_12421 Triticum urartu TRIUR3_12421 I
VIT_14s0066g01010 Vitis vinifera VIT_14s0066g01010 I
MYB98 Vitis vinifera VIT_17s0000g08550 I