ikzf2 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-1013632 T145350_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IKZF2
M10105_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HELIOSA_01 		0.827 1.000
IKZF2
M10106_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HELIOSA_02 		0.827 1.000
Ikzf1
M08969_2.00 		Mus musculus
HYTCCCAV
BTGGGARD		 Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C 		0.804 0.924
IKZF1
M08939_2.00 		Homo sapiens
HYTCCCAV
BTGGGARD		 Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C 		0.804 0.913
IKZF1
M10301_2.00 		Homo sapiens
NHBYGGGAAYRYB
VRYRTTCCCRVDN		 Transfac
Matys et al.(2006)
V$IK1_01 		0.804 0.913
IKZF1
M10302_2.00 		Homo sapiens
BNNWTCCCRNNN
NNNYGGGAWNNV		 Transfac
Matys et al.(2006)
V$IK2_01 		0.804 0.913
IKZF1
M10303_2.00 		Homo sapiens
KNYHGGGAAYRYY
RRYRTTCCCDRNM		 Transfac
Matys et al.(2006)
V$IK3_01 		0.804 0.913
IKZF1
M10304_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IK_Q5_01 		0.804 0.913
IKZF1
M10305_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IK_Q5 		0.804 0.913
IKZF1
M10306_2.00 		Homo sapiens
YYTCCCARA
TYTGGGARR		 Transfac
Matys et al.(2006)
V$LYF1_01 		0.804 0.913
IKZF3
M08320_2.00 		Homo sapiens
TTCCCNNSB
VSNNGGGAA		 ChIP-seq
Schmitges et al.(2016)
Q9UKT9_2-4.RCADE 		0.776 0.837
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI61078 C2H2 ZF 112 134
AAI61078 C2H2 ZF 140 162
AAI61078 C2H2 ZF 168 190
AAI61078 C2H2 ZF 196 219

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA032378 Oryza indica BGIOSGA032378 N 0.000
BGIOSGA032380 Oryza indica BGIOSGA032380 N 0.000
BRADI3G21380 Brachypodium distachyon BRADI3G21380 N 0.000
BRADI3G21390 Brachypodium distachyon BRADI3G21390 N 0.000
F775_06914 Aegilops tauschii F775_06914 N 0.000
GRMZM2G164735 Zea mays GRMZM2G164735 N 0.000
GRMZM2G179366 Zea mays GRMZM2G179366 N 0.000
LPERR10G00510 Leersia perrieri LPERR10G00510 N 0.000
MLOC_13459 Hordeum vulgare MLOC_13459 N 0.000
OB10G10530 Oryza brachyantha OB10G10530 N 0.000
OBART10G00640 Oryza barthii OBART10G00640 N 0.000
OGLUM10G00620 Oryza glumaepatula OGLUM10G00620 N 0.000
OGLUM10G00630 Oryza glumaepatula OGLUM10G00630 N 0.000
ONIVA10G01080 Oryza nivara ONIVA10G01080 N 0.000
OPUNC03G13410 Oryza punctata OPUNC03G13410 N 0.000
OPUNC10G00600 Oryza punctata OPUNC10G00600 N 0.000
Pavir.Ba02367 Panicum virgatum Pavir.Ba02367 N 0.000
Pavir.Bb00953 Panicum virgatum Pavir.Bb00953 N 0.000
Pavir.Ia04968 Panicum virgatum Pavir.Ia04968 N 0.000
Pavir.J31488 Panicum virgatum Pavir.J31488 N 0.000
Sb02g009750 Sorghum bicolor Sb02g009750 N 0.000
Sb02g009782 Sorghum bicolor Sb02g009782 N 0.000
Sb10g004880 Sorghum bicolor Sb10g004880 N 0.000
Si029480m.g Setaria italica Si029480m.g N 0.000
Si036337m.g Setaria italica Si036337m.g N 0.000
Traes_4DL_AE5093871 Triticum aestivum Traes_4DL_AE5093871 N 0.000