CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000012699
(
Gadus morhua
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01530 (zf-C2HC)
IPR002515
ENSGMOG00000012699
T159042_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000013589
C2HC ZF
296
325
VCPTPGCRGVGHIKGPKYNGHHSAFGCPYS
Links
Other
C2HC ZF
family TFs
Other
Gadus morhua
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30032.m000462
Ricinus communis
30032.m000462
N
Aquca_072_00063
Aquilegia coerulea
Aquca_072_00063
I
ARF31
Arabidopsis thaliana
AT2G36080
N
BGIOSGA031489
Oryza indica
BGIOSGA031489
N
BGIOSGA034469
Oryza indica
BGIOSGA034469
N
BGIOSGA036599
Oryza indica
BGIOSGA036599
N
Bo01079s020
Brassica oleracea
Bo01079s020
N
Bo4g035110
Brassica oleracea
Bo4g035110
N
Bostr.23794s0488
Boechera stricta
Bostr.23794s0488
N
Bra005301
Brassica rapa
Bra005301
N
Bra017262
Brassica rapa
Bra017262
N
BRADI4G25170
Brachypodium distachyon
BRADI4G25170
N
BRADI4G42167
Brachypodium distachyon
BRADI4G42167
N
Cagra.0993s0119
Capsella grandiflora
Cagra.0993s0119
N
Carubv10023925m.g
Capsella rubella
Carubv10023925m.g
N
cassava19218.valid.m1
Manihot esculenta
cassava19218.valid.m1
N
cassava3990.m1
Manihot esculenta
cassava3990.m1
N
Ca_00826
Cicer arietinum
Ca_00826
N
Ca_25633
Cicer arietinum
Ca_25633
I
Ciclev10012008m.g
Citrus clementina
Ciclev10012008m.g
I
Cla017937
Citrullus lanatus
Cla017937
I
Cucsa.241440
Cucumis sativus
Cucsa.241440
I
Eucgr.A02625
Eucalyptus grandis
Eucgr.A02625
N
evm.TU.contig_29173.1
Carica papaya
evm.TU.contig_29173.1
I
F775_02500
Aegilops tauschii
F775_02500
N
F775_31255
Aegilops tauschii
F775_31255
N
gene15627-v1.0-hybrid
Fragaria vesca
gene15627-v1.0-hybrid
I
GLYMA02G36090
Glycine max
GLYMA02G36090
I
GLYMA03G35700
Glycine max
GLYMA03G35700
N
GLYMA10G08871
Glycine max
GLYMA10G08871
I
Gorai.006G152400
Gossypium raimondii
Gorai.006G152400
N
Gorai.009G399000
Gossypium raimondii
Gorai.009G399000
N
GRMZM2G082227
Zea mays
GRMZM2G082227
N
GRMZM2G142999
Zea mays
GRMZM2G142999
N
GRMZM2G328742
Zea mays
GRMZM2G328742
N
GRMZM5G805685
Zea mays
GRMZM5G805685
N
GSMUA_Achr3G19210_001
Musa acuminata
GSMUA_Achr3G19210_001
N
GSMUA_Achr6G13140_001
Musa acuminata
GSMUA_Achr6G13140_001
N
GSMUA_Achr6G35600_001
Musa acuminata
GSMUA_Achr6G35600_001
N
GSMUA_Achr9G02600_001
Musa acuminata
GSMUA_Achr9G02600_001
I
LPERR12G03290
Leersia perrieri
LPERR12G03290
N
Lus10004226.g
Linum usitatissimum
Lus10004226.g
N
Lus10021326.g
Linum usitatissimum
Lus10021326.g
N
MDP0000229742
Malus domestica
MDP0000229742
N
MDP0000288808
Malus domestica
MDP0000288808
N
MLOC_11014
Hordeum vulgare
MLOC_11014
N
MLOC_48938
Hordeum vulgare
MLOC_48938
N
MLOC_56530
Hordeum vulgare
MLOC_56530
N
MTR_1g058350
Medicago truncatula
MTR_1g058350
N
MTR_7g105370
Medicago truncatula
MTR_7g105370
N
OB10G24100
Oryza brachyantha
OB10G24100
N
OB11G12920
Oryza brachyantha
OB11G12920
N
OB12G13420
Oryza brachyantha
OB12G13420
N
OBART10G17010
Oryza barthii
OBART10G17010
N
OBART11G03590
Oryza barthii
OBART11G03590
N
OBART12G03490
Oryza barthii
OBART12G03490
N
OGLUM10G17040
Oryza glumaepatula
OGLUM10G17040
N
OGLUM11G03240
Oryza glumaepatula
OGLUM11G03240
N
OGLUM12G04180
Oryza glumaepatula
OGLUM12G04180
N
OLONG_005139
Oryza longistaminata
OLONG_005139
N
OMERI10G13480
Oryza meridionalis
OMERI10G13480
N
OMERI11G03310
Oryza meridionalis
OMERI11G03310
N
OMERI12G01740
Oryza meridionalis
OMERI12G01740
N
ONIVA07G22860
Oryza nivara
ONIVA07G22860
N
ONIVA10G18740
Oryza nivara
ONIVA10G18740
N
ONIVA12G03130
Oryza nivara
ONIVA12G03130
N
OPUNC04G20430
Oryza punctata
OPUNC04G20430
I
OPUNC10G16940
Oryza punctata
OPUNC10G16940
N
OPUNC11G03320
Oryza punctata
OPUNC11G03320
N
OPUNC12G03300
Oryza punctata
OPUNC12G03300
N
orange1.1g019261m.g
Citrus sinensis
orange1.1g019261m.g
I
ORGLA10G0119700
Oryza glaberrima
ORGLA10G0119700
N
ORGLA11G0033600
Oryza glaberrima
ORGLA11G0033600
N
ORGLA12G0033700
Oryza glaberrima
ORGLA12G0033700
N
ORUFI10G18030
Oryza rufipogon
ORUFI10G18030
N
ORUFI11G03500
Oryza rufipogon
ORUFI11G03500
N
ORUFI12G03970
Oryza rufipogon
ORUFI12G03970
N
OS10G0537100
Oryza sativa
OS10G0537100
N
OS11G0156000
Oryza sativa
OS11G0156000
N
Pavir.Ca00165
Panicum virgatum
Pavir.Ca00165
N
Pavir.Cb02052
Panicum virgatum
Pavir.Cb02052
N
Pavir.Ha01761
Panicum virgatum
Pavir.Ha01761
N
Pavir.Hb01814
Panicum virgatum
Pavir.Hb01814
N
PGSC0003DMG400008936
Solanum tuberosum
PGSC0003DMG400008936
N
PK04952.1
Cannabis sativa
PK04952.1
I
Pm028725
Prunus mume
Pm028725
N
POPTR_0006s22460
Populus trichocarpa
POPTR_0006s22460
N
POPTR_0016s07540
Populus trichocarpa
POPTR_0016s07540
N
PRUPE_ppa015999mg
Prunus persica
PRUPE_ppa015999mg
N
PRUPE_ppa019539mg
Prunus persica
PRUPE_ppa019539mg
I
SapurV1A.0666s0090
Salix purpurea
SapurV1A.0666s0090
I
SapurV1A.0974s0140
Salix purpurea
SapurV1A.0974s0140
N
SapurV1A.1211s0020
Salix purpurea
SapurV1A.1211s0020
N
SapurV1A.1586s0010
Salix purpurea
SapurV1A.1586s0010
N
Sb01g030520
Sorghum bicolor
Sb01g030520
N
Sb05g003450
Sorghum bicolor
Sb05g003450
N
Sb08g003550
Sorghum bicolor
Sb08g003550
N
scaffold_402221.1
Arabidopsis lyrata
scaffold_402221.1
N
SELMODRAFT_59317
Selaginella moellendorffii
SELMODRAFT_59317
N
Si010849m.g
Setaria italica
Si010849m.g
N
Si027632m.g
Setaria italica
Si027632m.g
N
Solyc09g010230.1
Solanum lycopersicum
Solyc09g010230.1
N
TCM_022729
Theobroma cacao
TCM_022729
N
Thhalv10017156m.g
Eutrema salsugineum
Thhalv10017156m.g
N
Traes_1BL_53C31B54B
Triticum aestivum
Traes_1BL_53C31B54B
I
Traes_2AL_25382F498
Triticum aestivum
Traes_2AL_25382F498
N
Traes_2AL_41E2E66D9
Triticum aestivum
Traes_2AL_41E2E66D9
I
Traes_2BL_5ECD53274
Triticum aestivum
Traes_2BL_5ECD53274
N
Traes_2DL_2128A95BD
Triticum aestivum
Traes_2DL_2128A95BD
N
Traes_2DL_896E50180
Triticum aestivum
Traes_2DL_896E50180
I
Traes_4AL_4F2E6EF28
Triticum aestivum
Traes_4AL_4F2E6EF28
N
Traes_4BL_D9784B20C1
Triticum aestivum
Traes_4BL_D9784B20C1
N
Traes_4BS_5FECB39FA
Triticum aestivum
Traes_4BS_5FECB39FA
N
Traes_4DL_A83084AC1
Triticum aestivum
Traes_4DL_A83084AC1
N
Traes_4DS_E6210A614
Triticum aestivum
Traes_4DS_E6210A614
N
Traes_5BL_B98E347A8
Triticum aestivum
Traes_5BL_B98E347A8
N
Traes_5DL_CACDF70D6
Triticum aestivum
Traes_5DL_CACDF70D6
N
TRIUR3_24950
Triticum urartu
TRIUR3_24950
I
VIT_08s0007g02810
Vitis vinifera
VIT_08s0007g02810
N