Gorai.010G128700 (Gossypium raimondii)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Gorai.010G128700 T175362_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.814 0.814
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.814 0.814
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.785 0.785
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G128700.1 EIN3 38 285

Links

Other EIN3 family TFs
Other Gossypium raimondii TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30169.m006395 Ricinus communis 30169.m006395 I 0.895
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.727
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.788
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.714
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.830
EIL3 Arabidopsis thaliana AT1G73730 D 0.817
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.776
Bo6g087550 Brassica oleracea Bo6g087550 I 0.803
Bo6g118030 Brassica oleracea Bo6g118030 I 0.813
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.793
Bra003831 Brassica rapa Bra003831 I 0.711
Bra008110 Brassica rapa Bra008110 I 0.807
Bra015970 Brassica rapa Bra015970 I 0.806
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.743
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.809
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.809
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.862
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.833
cassava3620.m1 Manihot esculenta cassava3620.m1 I
Ca_02669 Cicer arietinum Ca_02669 I 0.866
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.874
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.883
Cla006390 Citrullus lanatus Cla006390 I 0.799
Cucsa.142750 Cucumis sativus Cucsa.142750 I
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.879
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.874
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.714
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.707
F775_17920 Aegilops tauschii F775_17920 I 0.747
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.866
GLYMA13G03700 Glycine max GLYMA13G03700 I
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.858
GLYMA14G04550 Glycine max GLYMA14G04550 I
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.870
GLYMA20G12250 Glycine max GLYMA20G12250 I
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.870
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I
Gorai.013G250300 Gossypium raimondii Gorai.013G250300 I 0.791
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.735
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.773
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.754
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.762
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.731
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.751
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.850
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.842
MDP0000490180 Malus domestica MDP0000490180 I 0.870
MDP0000562585 Malus domestica MDP0000562585 I 0.874
MDP0000565880 Malus domestica MDP0000565880 I 0.874
mgf020935m Mimulus guttatus mgf020935m I 0.814
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.707
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.747
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.850
OB09G21280 Oryza brachyantha OB09G21280 I 0.747
OBART09G14750 Oryza barthii OBART09G14750 I 0.789
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.789
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.776
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.789
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.772
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.883
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.789
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.776
OS09G0490200 Oryza sativa OS09G0490200 D 0.776
Pavir.Fb01951 Panicum virgatum Pavir.Fb01951 I 0.711
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.743
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.739
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.750
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.781
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.838
PK19114.1 Cannabis sativa PK19114.1 I 0.879
Pm028171 Prunus mume Pm028171 I 0.851
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.883
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I 0.763
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.862
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.855
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.862
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.870
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.735
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.719
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I
Si013426m.g Setaria italica Si013426m.g I 0.715
Si029259m.g Setaria italica Si029259m.g I 0.751
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.785
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.834
TCM_040510 Theobroma cacao TCM_040510 I 0.891
TCM_042022 Theobroma cacao TCM_042022 I
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.813
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.724
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.743
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.747
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.803
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.709
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.711
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.711
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.709
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.862
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I