Cucsa.142750 (Cucumis sativus)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Cucsa.142750 T175304_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.927 0.927
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.911 0.911
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.911 0.911
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.911 0.911
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.890 0.890
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.850 0.850
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.703 0.703
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.142750.1 EIN3 49 296
Cucsa.142750.2 EIN3 49 296
Cucsa.142750.3 EIN3 49 296
Cucsa.142750.4 EIN3 49 296

Links

Other EIN3 family TFs
Other Cucumis sativus TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.951
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.951
TCM_042022 Theobroma cacao TCM_042022 I 0.951
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.951
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.951
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.947
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.943
29708.m000185 Ricinus communis 29708.m000185 I 0.943
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.943
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.939
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.939
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.939
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.939
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.939
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.935
Ca_10236 Cicer arietinum Ca_10236 I 0.935
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.935
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.935
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.931
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.931
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.927
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.927
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.923
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.923
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.923
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.923
Ca_07534 Cicer arietinum Ca_07534 I 0.919
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.919
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.915
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.915
EIN3 Arabidopsis thaliana AT3G20770 D 0.911
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.911
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.911
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.911
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.906
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.906
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.902
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.902
Bo5g106280 Brassica oleracea Bo5g106280 I 0.895
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.894
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.890
Pm017009 Prunus mume Pm017009 I 0.890
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.890
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.890
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.890
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.890
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.890
EIL1 Arabidopsis thaliana AT2G27050 D 0.887
Bra000528 Brassica rapa Bra000528 I 0.886
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.886
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.882
Bo3g041690 Brassica oleracea Bo3g041690 I 0.878
mgf015996m Mimulus guttatus mgf015996m I 0.878
mgf018950m Mimulus guttatus mgf018950m I 0.878
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.878
MDP0000202831 Malus domestica MDP0000202831 I 0.878
PK01239.1 Cannabis sativa PK01239.1 I 0.878
Bo1g108650 Brassica oleracea Bo1g108650 I 0.874
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.874
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.874
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.874
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.874
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.874
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.874
PK13351.1 Cannabis sativa PK13351.1 I 0.874
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.870
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.870
MDP0000212881 Malus domestica MDP0000212881 I 0.870
MDP0000306498 Malus domestica MDP0000306498 I 0.870
MDP0000564884 Malus domestica MDP0000564884 I 0.870
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.866
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.866
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.862
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.862
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.862
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.862
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.850
Bo3g076180 Brassica oleracea Bo3g076180 I 0.846
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.841
Bra001802 Brassica rapa Bra001802 I 0.839
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.837
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.833
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.829
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.825
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.825
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.825
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.825
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.825
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.825
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.825
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.825
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.825
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.821
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.817
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.813
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.813
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.813
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.809
OS03G0324200 Oryza sativa OS03G0324200 I 0.809
OS03G0324300 Oryza sativa OS03G0324300 I 0.809
Si034616m.g Setaria italica Si034616m.g I 0.809
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.809
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.809
mgf012394m Mimulus guttatus mgf012394m I 0.805
F775_28545 Aegilops tauschii F775_28545 I 0.801
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.801
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.801
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.801
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.801
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.801
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.801
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.797
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.793
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.793
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.789
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.789
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.789
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.789
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.789
OS07G0685700 Oryza sativa OS07G0685700 I 0.789
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.773
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.764
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.760
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.758
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.757
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.748
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.748
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.744
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.744
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.740
Si029213m.g Setaria italica Si029213m.g I 0.737
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.733
OBART07G26760 Oryza barthii OBART07G26760 I 0.728
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.725
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.724
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.720
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.720
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.720
Pm028171 Prunus mume Pm028171 I 0.720
PK19114.1 Cannabis sativa PK19114.1 I 0.720
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.715
30169.m006395 Ricinus communis 30169.m006395 I 0.715
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.715
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.715
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.715
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.713
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.713
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.711
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.711
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.711
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.711
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.711
MDP0000490180 Malus domestica MDP0000490180 I 0.711
MDP0000562585 Malus domestica MDP0000562585 I 0.711
MDP0000565880 Malus domestica MDP0000565880 I 0.711
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.709
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.707
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.707
TCM_040510 Theobroma cacao TCM_040510 I 0.707
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.707
Ca_02669 Cicer arietinum Ca_02669 I 0.707
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.707
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.707
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.707
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.704
EIL3 Arabidopsis thaliana AT1G73730 D 0.703
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.703
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.703
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.703
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.703
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.703
mgf020935m Mimulus guttatus mgf020935m I 0.700