Solyc06g073730.1 (Solanum lycopersicum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 Solyc06g073730.1 T175245_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.931 0.931
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.886 0.886
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.878 0.878
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.878 0.878
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.878 0.878
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.829 0.829
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc06g073730.1.1 EIN3 48 295

Links

Other EIN3 family TFs
Other Solanum lycopersicum TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.992
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.931
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.927
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.927
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.906
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.906
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.906
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.902
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.898
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.894
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.894
TCM_042022 Theobroma cacao TCM_042022 I 0.894
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.894
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.894
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.894
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.890
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.890
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.887
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.887
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.886
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.886
29708.m000185 Ricinus communis 29708.m000185 I 0.886
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.886
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.886
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.886
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.886
EIL1 Arabidopsis thaliana AT2G27050 D 0.883
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.882
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.882
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.882
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.882
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.882
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.882
EIN3 Arabidopsis thaliana AT3G20770 D 0.878
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.878
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.878
Ca_10236 Cicer arietinum Ca_10236 I 0.878
mgf015996m Mimulus guttatus mgf015996m I 0.876
Bo5g106280 Brassica oleracea Bo5g106280 I 0.875
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.874
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.874
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.874
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.874
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.874
MDP0000202831 Malus domestica MDP0000202831 I 0.874
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.874
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.870
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.870
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.870
Ca_07534 Cicer arietinum Ca_07534 I 0.870
Pm017009 Prunus mume Pm017009 I 0.870
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.870
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.870
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.870
PK13351.1 Cannabis sativa PK13351.1 I 0.870
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.866
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.866
MDP0000212881 Malus domestica MDP0000212881 I 0.866
MDP0000564884 Malus domestica MDP0000564884 I 0.866
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.866
PK01239.1 Cannabis sativa PK01239.1 I 0.866
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.863
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.862
Bra000528 Brassica rapa Bra000528 I 0.859
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.858
MDP0000306498 Malus domestica MDP0000306498 I 0.858
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.858
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.854
Bo3g041690 Brassica oleracea Bo3g041690 I 0.851
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.850
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.850
Bo1g108650 Brassica oleracea Bo1g108650 I 0.849
mgf018950m Mimulus guttatus mgf018950m I 0.849
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.846
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.841
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.840
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.837
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.835
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.829
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.825
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.825
Bra001802 Brassica rapa Bra001802 I 0.823
Bo3g076180 Brassica oleracea Bo3g076180 I 0.821
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.821
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.817
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.813
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.806
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.805
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.802
mgf012394m Mimulus guttatus mgf012394m I 0.801
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.801
F775_28545 Aegilops tauschii F775_28545 I 0.793
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.793
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.793
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.793
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.793
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.793
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.793
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.789
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.789
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.789
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.789
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.789
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.789
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.789
OS03G0324200 Oryza sativa OS03G0324200 I 0.789
OS03G0324300 Oryza sativa OS03G0324300 I 0.789
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.789
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.789
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.789
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.785
Si034616m.g Setaria italica Si034616m.g I 0.785
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.782
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.773
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.773
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.764
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.764
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.764
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.764
OS07G0685700 Oryza sativa OS07G0685700 I 0.764
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.762
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.753
OBART07G26760 Oryza barthii OBART07G26760 I 0.749
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.745
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.741
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.739
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.733
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.732
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.728
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.721
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.720
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.720
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.718
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.717
Si029213m.g Setaria italica Si029213m.g I 0.717
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.715
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.713
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.713
Pm028171 Prunus mume Pm028171 I 0.711
MDP0000562585 Malus domestica MDP0000562585 I 0.711
MDP0000565880 Malus domestica MDP0000565880 I 0.711
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.711
PK19114.1 Cannabis sativa PK19114.1 I 0.709
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.709
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.707
MDP0000490180 Malus domestica MDP0000490180 I 0.707
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.704
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.704
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.704
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.704
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.703
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.703
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.703
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.703
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.703
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.703
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.701
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.701
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.700
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.700
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.700
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.700