CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV10_02392
(
Exophiala mesophila
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PV10_02392
T195022_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.861
0.917
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIV94645
GATA
447
482
CHSCNRAETPEWRRGPDGARTLCNACGLHYAKLTRK
KIV94646
GATA
446
481
CHSCNRAETPEWRRGPDGARTLCNACGLHYAKLTRK
KIV94647
GATA
429
464
CHSCNRAETPEWRRGPDGARTLCNACGLHYAKLTRK
Links
Other
GATA
family TFs
Other
Exophiala mesophila
TFs
205 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_kg.C_130080
Fragilariopsis cylindrus
estExt_fgenesh2_kg.C_130080
N
0.000
fgenesh2_pg.4_#_1036
Fragilariopsis cylindrus
fgenesh2_pg.4_#_1036
N
0.000
fgenesh2_pg.9_#_353
Fragilariopsis cylindrus
fgenesh2_pg.9_#_353
N
0.000
GPLIN_000170600
Globodera pallida
GPLIN_000170600
N
0.000
NCLIV_023590
Neospora caninum
NCLIV_023590
N
0.000
PAS_chr1-1_0442
Komagataella pastoris
PAS_chr1-1_0442
N
0.000
Phatr3_J33840
Phaeodactylum tricornutum
Phatr3_J33840
N
0.000
Phatr3_J42576
Phaeodactylum tricornutum
Phatr3_J42576
N
0.000
Phatr3_J47350
Phaeodactylum tricornutum
Phatr3_J47350
N
0.000
Phatr3_J49506
Phaeodactylum tricornutum
Phatr3_J49506
N
0.000
S40285_05706
Stachybotrys chlorohalonata
S40285_05706
N
0.000
Thaps11168
Thalassiosira pseudonana
Thaps11168
N
0.000
Thaps12024
Thalassiosira pseudonana
Thaps12024
N
0.000
Thaps22372
Thalassiosira pseudonana
Thaps22372
N
0.000
Thaps22889
Thalassiosira pseudonana
Thaps22889
N
0.000
Thaps25909
Thalassiosira pseudonana
Thaps25909
N
0.000
Thaps5285
Thalassiosira pseudonana
Thaps5285
N
0.000
UCREL1_5722
Eutypa lata
UCREL1_5722
N
0.000
XP_002490100.1
Pichia pastoris
XP_002490100.1
N
0.000