Gorai.008G067800 (Gossypium raimondii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Gorai.008G067800 T196602_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 0.972
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 0.972
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.917
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G067800.1 GATA 107 142

Links

Other GATA family TFs
Other Gossypium raimondii TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29841.m002855 Ricinus communis 29841.m002855 N 0.000
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.000
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.000
MBD10 Arabidopsis thaliana AT1G15340 N 0.000
MBD11 Arabidopsis thaliana AT3G15790 N 0.000
Bo8g066360 Brassica oleracea Bo8g066360 N 0.000
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.000
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.000
Bra016665 Brassica rapa Bra016665 N 0.000
Bra021136 Brassica rapa Bra021136 N 0.000
Bra027207 Brassica rapa Bra027207 N 0.000
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.000
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.000
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.000
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.000
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.000
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.000
Ca_06682 Cicer arietinum Ca_06682 N 0.000
Ca_19192 Cicer arietinum Ca_19192 N 0.000
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.000
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.000
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.000
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.000
Cla012920 Citrullus lanatus Cla012920 N 0.000
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.000
Cucsa.105420 Cucumis sativus Cucsa.105420 N 0.000
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.000
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.000
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.000
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.000
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.000
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.000
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.000
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.000
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.000
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.000
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.000
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.000
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.000
GSMUA_Achr2G12870_001 Musa acuminata GSMUA_Achr2G12870_001 N 0.000
GSMUA_Achr7G01310_001 Musa acuminata GSMUA_Achr7G01310_001 N 0.000
MDP0000152128 Malus domestica MDP0000152128 N 0.000
MDP0000248422 Malus domestica MDP0000248422 N 0.000
MDP0000375866 Malus domestica MDP0000375866 N 0.000
MDP0000462461 Malus domestica MDP0000462461 N 0.000
MDP0000574053 Malus domestica MDP0000574053 N 0.000
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.000
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.000
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.000
PGSC0003DMG400028533 Solanum tuberosum PGSC0003DMG400028533 N 0.000
PK04144.1 Cannabis sativa PK04144.1 N 0.000
PK24888.1 Cannabis sativa PK24888.1 N 0.000
Pm013666 Prunus mume Pm013666 N 0.000
Pm027560 Prunus mume Pm027560 N 0.000
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.000
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.000
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.000
Solyc06g068140.2 Solanum lycopersicum Solyc06g068140.2 N 0.000
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.000
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.000
TCM_027169 Theobroma cacao TCM_027169 N 0.000
TCM_038107 Theobroma cacao TCM_038107 N 0.000
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.000
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.000