CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_08s0007g00510
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_08s0007g00510
T201831_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_08s0007g00510.t01
GRAS
336
707
LRTLLIQCAQAVAADDRRSANELLKQVRQHSSPFGDGNQRLAHCFADGLEARLAGTGSQIYKGLISKGRSAADILKAYHLYVSVCPFRKMSNFFSNRSIMIRAEKATRLHIIDFGILYGFQWPTFIQRLSSRPGGPPKLRITGIEFPQPGFRPAERIEETGRRLANYAASFNVPFEYNAIAKKWETIQLEELQIDRDELLVVNCLYRFETLLDETVAVDSPRNIVLNMIKKIRPDIFIQGIVNGSYNAPFFVTRFREALFHFSAQFDMLETTVLRENWERMLIEREIFGREALNVIACEGWERVERPETYKQWQLRNLRAGFVQLPLNRETMKRATERVTTNYHKDFVIDEDSQWMLQGWKGRIIYALSAWK
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27568.m000253
Ricinus communis
27568.m000253
N
0.727
29767.m000200
Ricinus communis
29767.m000200
N
0.753
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
0.757
BGIOSGA010017
Oryza indica
BGIOSGA010017
N
0.703
cassava15723.m1
Manihot esculenta
cassava15723.m1
N
0.711
cassava19450.valid.m1
Manihot esculenta
cassava19450.valid.m1
N
0.708
cassava2361.valid.m1
Manihot esculenta
cassava2361.valid.m1
N
0.754
cassava31335.valid.m1
Manihot esculenta
cassava31335.valid.m1
N
0.730
Ca_21138
Cicer arietinum
Ca_21138
N
0.776
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.805
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.770
Cla018179
Citrullus lanatus
Cla018179
N
0.792
Cucsa.175500
Cucumis sativus
Cucsa.175500
N
0.786
Eucgr.A01279
Eucalyptus grandis
Eucgr.A01279
N
0.773
evm.TU.supercontig_1.422
Carica papaya
evm.TU.supercontig_1.422
N
0.724
gene18433-v1.0-hybrid
Fragaria vesca
gene18433-v1.0-hybrid
N
0.772
GLYMA03G10320
Glycine max
GLYMA03G10320
N
0.751
GLYMA07G15950
Glycine max
GLYMA07G15950
N
0.772
GLYMA18G39920
Glycine max
GLYMA18G39920
N
0.772
Gorai.007G376400
Gossypium raimondii
Gorai.007G376400
N
0.743
Gorai.010G201000
Gossypium raimondii
Gorai.010G201000
N
0.732
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.759
GRMZM2G049159
Zea mays
GRMZM2G049159
N
0.711
GRMZM2G098784
Zea mays
GRMZM2G098784
N
0.700
LPERR03G24920
Leersia perrieri
LPERR03G24920
N
0.700
Lus10023404.g
Linum usitatissimum
Lus10023404.g
N
0.714
Lus10024384.g
Linum usitatissimum
Lus10024384.g
N
0.741
Lus10040284.g
Linum usitatissimum
Lus10040284.g
N
0.708
mgf011165m
Mimulus guttatus
mgf011165m
N
0.738
mgf014897m
Mimulus guttatus
mgf014897m
N
0.730
MTR_7g062120
Medicago truncatula
MTR_7g062120
N
0.759
OB03G37330
Oryza brachyantha
OB03G37330
N
0.700
OBART03G30260
Oryza barthii
OBART03G30260
N
0.705
OGLUM03G30480
Oryza glumaepatula
OGLUM03G30480
N
0.705
OMERI03G26460
Oryza meridionalis
OMERI03G26460
N
0.705
ONIVA03G31510
Oryza nivara
ONIVA03G31510
N
0.705
OPUNC03G27510
Oryza punctata
OPUNC03G27510
N
0.705
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.773
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.808
ORGLA03G0287000
Oryza glaberrima
ORGLA03G0287000
N
0.705
OS03G0690600
Oryza sativa
OS03G0690600
N
0.703
Pavir.Ia03770
Panicum virgatum
Pavir.Ia03770
N
0.700
Pavir.J32327
Panicum virgatum
Pavir.J32327
N
0.700
PGSC0003DMG400008904
Solanum tuberosum
PGSC0003DMG400008904
N
0.765
PGSC0003DMG400019200
Solanum tuberosum
PGSC0003DMG400019200
N
0.765
PK20526.1
Cannabis sativa
PK20526.1
N
0.762
Pm002685
Prunus mume
Pm002685
N
0.792
Pm018822
Prunus mume
Pm018822
N
0.722
POPTR_0006s08690
Populus trichocarpa
POPTR_0006s08690
N
0.800
POPTR_0008s05750
Populus trichocarpa
POPTR_0008s05750
N
0.741
PRUPE_ppa001883mg
Prunus persica
PRUPE_ppa001883mg
N
0.789
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.700
PRUPE_ppa021438mg
Prunus persica
PRUPE_ppa021438mg
N
0.716
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.806
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
0.709
SapurV1A.0451s0060
Salix purpurea
SapurV1A.0451s0060
N
0.738
Sb01g039670
Sorghum bicolor
Sb01g039670
N
0.711
Si034417m.g
Setaria italica
Si034417m.g
N
0.714
Solyc09g010920.1
Solanum lycopersicum
Solyc09g010920.1
N
0.762
Solyc10g086530.1
Solanum lycopersicum
Solyc10g086530.1
N
0.741
TCM_021920
Theobroma cacao
TCM_021920
N
0.789
TCM_042705
Theobroma cacao
TCM_042705
N
0.751
Thhalv10016318m.g
Eutrema salsugineum
Thhalv10016318m.g
N
0.703
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.725
Traes_5AL_9AE0ED26A
Triticum aestivum
Traes_5AL_9AE0ED26A
N
0.703
VIT_13s0019g01700
Vitis vinifera
VIT_13s0019g01700
N
0.726
VIT_13s0019g01810
Vitis vinifera
VIT_13s0019g01810
N
0.727