Bo5g055970 (Brassica oleracea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Bo5g055970 T204936_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.859 0.930
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g055970.1 Homeodomain 41 97

Links

Other Homeodomain family TFs
Other Brassica oleracea TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_Genewise1Plus.C_70298 Fragilariopsis cylindrus estExt_Genewise1Plus.C_70298 N 0.000
fgenesh2_pg.4_#_1036 Fragilariopsis cylindrus fgenesh2_pg.4_#_1036 N 0.000
fgenesh2_pg.9_#_353 Fragilariopsis cylindrus fgenesh2_pg.9_#_353 N 0.000
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.000
MAM_05902 Metarhizium album MAM_05902 N 0.000
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N 0.000
NCLIV_023590 Neospora caninum NCLIV_023590 N 0.000
PAS_chr3_1149 Komagataella pastoris PAS_chr3_1149 N 0.000
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.000
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.000
Phatr3_J39045 Phaeodactylum tricornutum Phatr3_J39045 N 0.000
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.000
Phatr3_J50240 Phaeodactylum tricornutum Phatr3_J50240 N 0.000
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.000
TGME49_081900 Toxoplasma gondii TGME49_081900 N 0.000
Thaps11168 Thalassiosira pseudonana Thaps11168 N 0.000
Thaps22889 Thalassiosira pseudonana Thaps22889 N 0.000
Thaps24755 Thalassiosira pseudonana Thaps24755 N 0.000
Thaps25909 Thalassiosira pseudonana Thaps25909 N 0.000
Thaps4075 Thalassiosira pseudonana Thaps4075 N 0.000
Thaps4076 Thalassiosira pseudonana Thaps4076 N 0.000
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.000
Thapsdraft1840 Thalassiosira pseudonana Thapsdraft1840 N 0.000
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.000
XP_002492281.1 Pichia pastoris XP_002492281.1 N 0.000