Lus10002029.g (Linum usitatissimum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Lus10002029.g T228827_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10002029 Homeodomain 264 317

Links

Other Homeodomain family TFs
Other Linum usitatissimum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29848.m004652 Ricinus communis 29848.m004652 N 0.669
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.631
OCP3 Arabidopsis thaliana AT5G11270 N 0.645
Bo9g171420 Brassica oleracea Bo9g171420 N 0.634
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.631
Bra008975 Brassica rapa Bra008975 N 0.634
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.645
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.645
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.638
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.650
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.633
Cla021272 Citrullus lanatus Cla021272 N 0.658
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.658
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.690
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.645
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.694
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.666
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.666
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.658
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N 0.602
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.746
MDP0000119866 Malus domestica MDP0000119866 N 0.657
MDP0000202143 Malus domestica MDP0000202143 N 0.677
OB06G27850 Oryza brachyantha OB06G27850 N 0.600
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.633
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.610
PK00680.1 Cannabis sativa PK00680.1 N 0.667
Pm004594 Prunus mume Pm004594 N 0.666
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.666
SapurV1A.0043s0520 Salix purpurea SapurV1A.0043s0520 N 0.611
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.617
TCM_038389 Theobroma cacao TCM_038389 N 0.658
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.634
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.734