estExt_fgenesh1_pg.C_740147 (Physcomitrella patens)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 estExt_fgenesh1_pg.C_740147 T244771_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.702 0.702
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_740147 Leafy 6 348

Links

Other Leafy family TFs
Other Physcomitrella patens TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27996.m000153 Ricinus communis 27996.m000153 N
Al_scaffold_0004_1965 Arabidopsis lyrata Al_scaffold_0004_1965 N
BHLH52 Arabidopsis thaliana AT1G30670 N
BHLH53 Arabidopsis thaliana AT2G34820 N
BGIOSGA037431 Oryza indica BGIOSGA037431 N
Bo3g028090 Brassica oleracea Bo3g028090 N
Bo4g039270 Brassica oleracea Bo4g039270 N
Bo4g182930 Brassica oleracea Bo4g182930 N
Bostr.15697s0367 Boechera stricta Bostr.15697s0367 N
Bostr.23794s0621 Boechera stricta Bostr.23794s0621 N
Bra005389 Brassica rapa Bra005389 N
Bra021933 Brassica rapa Bra021933 N
Bra022993 Brassica rapa Bra022993 N
BRADI4G29370 Brachypodium distachyon BRADI4G29370 N
Cagra.1508s0136 Capsella grandiflora Cagra.1508s0136 N
Carubv10011063m.g Capsella rubella Carubv10011063m.g N
cassava27522.m1 Manihot esculenta cassava27522.m1 N
Ca_13608 Cicer arietinum Ca_13608 N
Ca_13610 Cicer arietinum Ca_13610 N
Ciclev10017579m.g Citrus clementina Ciclev10017579m.g N
Eucgr.D01630 Eucalyptus grandis Eucgr.D01630 N
evm.TU.supercontig_489.5 Carica papaya evm.TU.supercontig_489.5 N
evm.TU.supercontig_489.6 Carica papaya evm.TU.supercontig_489.6 N
F775_52642 Aegilops tauschii F775_52642 N
fgenesh1_pm.C_scaffold_1002485 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002485 N
gene18542-v1.0-hybrid Fragaria vesca gene18542-v1.0-hybrid N
gene20146-v1.0-hybrid Fragaria vesca gene20146-v1.0-hybrid N
GLYMA08G17747 Glycine max GLYMA08G17747 N
GLYMA15G41400 Glycine max GLYMA15G41400 N
Gorai.005G218900 Gossypium raimondii Gorai.005G218900 N
GRMZM2G137374 Zea mays GRMZM2G137374 N
GSMUA_Achr11G16900_001 Musa acuminata GSMUA_Achr11G16900_001 N
GSMUA_AchrUn_randomG20690_001 Musa acuminata GSMUA_AchrUn_randomG20690_001 N
Lus10005451.g Linum usitatissimum Lus10005451.g N
Lus10038432.g Linum usitatissimum Lus10038432.g N
MDP0000209483 Malus domestica MDP0000209483 N
MDP0000216053 Malus domestica MDP0000216053 N
MDP0000280921 Malus domestica MDP0000280921 N
MDP0000791364 Malus domestica MDP0000791364 N
mgf020354m Mimulus guttatus mgf020354m N
MTR_1g060700 Medicago truncatula MTR_1g060700 N
MTR_2g067000 Medicago truncatula MTR_2g067000 N
OB07G14260 Oryza brachyantha OB07G14260 N
OB12G20560 Oryza brachyantha OB12G20560 N
OGLUM12G14400 Oryza glumaepatula OGLUM12G14400 N
ONIVA12G13030 Oryza nivara ONIVA12G13030 N
OPUNC12G11490 Oryza punctata OPUNC12G11490 N
orange1.1g041370m.g Citrus sinensis orange1.1g041370m.g N
ORGLA12G0114800 Oryza glaberrima ORGLA12G0114800 N
ORUFI12G13970 Oryza rufipogon ORUFI12G13970 N
Pavir.Ca01783 Panicum virgatum Pavir.Ca01783 N
Pavir.Ca01784 Panicum virgatum Pavir.Ca01784 N
Pavir.Ia04589 Panicum virgatum Pavir.Ia04589 N
Pm010610 Prunus mume Pm010610 N
POPTR_0001s46530 Populus trichocarpa POPTR_0001s46530 N
POPTR_0011s16100 Populus trichocarpa POPTR_0011s16100 N
PRUPE_ppa025945mg Prunus persica PRUPE_ppa025945mg N
SapurV1A.0527s0040 Salix purpurea SapurV1A.0527s0040 N
SapurV1A.0602s0120 Salix purpurea SapurV1A.0602s0120 N
Sb01g048400 Sorghum bicolor Sb01g048400 N
Si038598m.g Setaria italica Si038598m.g N
TCM_027032 Theobroma cacao TCM_027032 N
TCM_033386 Theobroma cacao TCM_033386 N
Thhalv10009765m.g Eutrema salsugineum Thhalv10009765m.g N
Thhalv10017751m.g Eutrema salsugineum Thhalv10017751m.g N
Traes_5BL_B55F708EC Triticum aestivum Traes_5BL_B55F708EC N
Traes_5DL_84C86F76D Triticum aestivum Traes_5DL_84C86F76D N
VIT_10s0092g00030 Vitis vinifera VIT_10s0092g00030 N