Bo8g112780 (Brassica oleracea)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Bo8g112780 T245017_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g112780.1 LOB 32 130

Links

Other LOB family TFs
Other Brassica oleracea TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30111.m000703 Ricinus communis 30111.m000703 I 0.848
AC214648.3_FG005 Zea mays AC214648.3_FG005 I 0.768
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.798
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.747
LBD11 Arabidopsis thaliana AT2G28500 N 0.869
BGIOSGA010952 Oryza indica BGIOSGA010952 N 0.747
BGIOSGA038947 Oryza indica BGIOSGA038947 N 0.747
Bo01039s010 Brassica oleracea Bo01039s010 N 0.879
Bo3g040220 Brassica oleracea Bo3g040220 N 0.859
Bo4g165420 Brassica oleracea Bo4g165420 N 0.869
Bo5g008590 Brassica oleracea Bo5g008590 N 0.919
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N 0.919
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.889
Bra000491 Brassica rapa Bra000491 N 0.838
Bra011942 Brassica rapa Bra011942 N 0.869
Bra018675 Brassica rapa Bra018675 N 0.919
Bra031599 Brassica rapa Bra031599 N 0.980
Bra035698 Brassica rapa Bra035698 N 0.869
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N 0.727
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.879
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N 0.869
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.889
Carubv10023989m.g Capsella rubella Carubv10023989m.g N 0.869
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.859
cassava16668.m1 Manihot esculenta cassava16668.m1 N 0.787
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.848
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.798
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.859
Ca_02507 Cicer arietinum Ca_02507 N 0.768
Ca_04287 Cicer arietinum Ca_04287 I 0.828
Ca_14605 Cicer arietinum Ca_14605 I 0.838
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.838
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.859
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.778
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.828
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.859
Cla000556 Citrullus lanatus Cla000556 I 0.869
Cla005133 Citrullus lanatus Cla005133 N 0.768
Cla005134 Citrullus lanatus Cla005134 N 0.818
Cla020379 Citrullus lanatus Cla020379 I 0.859
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.848
Cucsa.052720 Cucumis sativus Cucsa.052720 I 0.848
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.838
Cucsa.207390 Cucumis sativus Cucsa.207390 N 0.758
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.788
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.859
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.808
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.828
F775_02335 Aegilops tauschii F775_02335 N 0.737
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N 0.889
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N 0.879
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.798
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.838
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.848
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.848
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.848
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.848
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.828
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.848
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.838
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.828
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.808
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.859
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N 0.818
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.828
GRMZM2G021095 Zea mays GRMZM2G021095 N 0.768
GRMZM2G145568 Zea mays GRMZM2G145568 N 0.778
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.768
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.818
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.707
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N 0.747
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.788
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.818
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N 0.758
LPERR03G11720 Leersia perrieri LPERR03G11720 N 0.747
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.768
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.808
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.808
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.818
MDP0000123013 Malus domestica MDP0000123013 I 0.818
MDP0000151784 Malus domestica MDP0000151784 I 0.818
MDP0000218986 Malus domestica MDP0000218986 I 0.838
MDP0000318244 Malus domestica MDP0000318244 I 0.838
MDP0000319331 Malus domestica MDP0000319331 I 0.828
MDP0000822986 Malus domestica MDP0000822986 I 0.798
MDP0000879799 Malus domestica MDP0000879799 N 0.808
mgf015666m Mimulus guttatus mgf015666m N 0.758
mgf019622m Mimulus guttatus mgf019622m N 0.788
mgf022524m Mimulus guttatus mgf022524m N 0.808
MLOC_68570 Hordeum vulgare MLOC_68570 N 0.778
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.828
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.818
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.808
OB03G23270 Oryza brachyantha OB03G23270 N 0.737
OB05G11740 Oryza brachyantha OB05G11740 I 0.778
OBART03G13260 Oryza barthii OBART03G13260 N 0.747
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N 0.747
OMERI03G12370 Oryza meridionalis OMERI03G12370 N 0.747
ONIVA03G14510 Oryza nivara ONIVA03G14510 N 0.747
OPUNC03G12790 Oryza punctata OPUNC03G12790 N 0.747
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.859
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.778
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.859
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N 0.747
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.768
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N 0.747
OS03G0287400 Oryza sativa OS03G0287400 N 0.747
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.768
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N 0.768
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N 0.768
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.768
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N 0.788
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.808
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.778
PK23777.1 Cannabis sativa PK23777.1 I 0.828
PK27389.1 Cannabis sativa PK27389.1 I 0.848
Pm000938 Prunus mume Pm000938 I 0.838
Pm018585 Prunus mume Pm018585 I 0.828
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.828
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.828
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.859
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.838
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.828
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.838
Sb01g038650 Sorghum bicolor Sb01g038650 N 0.768
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.778
Si024430m.g Setaria italica Si024430m.g N 0.768
Si037280m.g Setaria italica Si037280m.g N 0.758
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.808
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.828
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.788
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.798
TCM_041094 Theobroma cacao TCM_041094 I 0.848
TCM_043081 Theobroma cacao TCM_043081 I 0.838
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.919
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N 0.869
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N 0.778
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N 0.778
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N 0.778
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N 0.717
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N 0.737
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.798
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.828
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.848
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.727
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.768
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.707
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.707