MTR_8g022290 (Medicago truncatula)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 MTR_8g022290 T249468_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.909 0.720
ASIL1
M02264_2.00 		Arabidopsis thaliana
NNDHCGDHNN
NNDHCGDHNN		 PBM
Weirauch et al.(2014)
pTH7464 		0.819 0.520
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AET01848 MADF 79 161

Links

Other MADF family TFs
Other Medicago truncatula TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29727.m000472 Ricinus communis 29727.m000472 I 0.886
29814.m000741 Ricinus communis 29814.m000741 I 0.870
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.933
AMTR_s00007p00263040 Amborella trichopoda AMTR_s00007p00263040 N 0.842
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.872
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.842
ASIL1 Arabidopsis thaliana AT1G54060 D 0.819
ASIL2 Arabidopsis thaliana AT3G14180 D 0.909
Bo1g134590 Brassica oleracea Bo1g134590 I 0.813
Bo3g065930 Brassica oleracea Bo3g065930 I 0.864
Bo3g184450 Brassica oleracea Bo3g184450 I 0.844
Bo6g033010 Brassica oleracea Bo6g033010 I 0.825
Bo6g050870 Brassica oleracea Bo6g050870 I 0.824
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I 0.863
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.909
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.858
Bra014370 Brassica rapa Bra014370 I 0.840
Bra037960 Brassica rapa Bra037960 I 0.825
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.844
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.872
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.909
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.844
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.909
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.854
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.886
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.917
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.877
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.916
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.881
Cla015773 Citrullus lanatus Cla015773 I 0.917
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.917
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.855
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.860
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.858
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.909
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.927
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.825
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.935
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.919
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.917
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.908
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.887
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.896
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.870
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.858
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.964
Lus10020652.g Linum usitatissimum Lus10020652.g I 0.898
MDP0000097759 Malus domestica MDP0000097759 N 0.855
MDP0000255104 Malus domestica MDP0000255104 I 0.924
MDP0000281471 Malus domestica MDP0000281471 I 0.924
MDP0000943251 Malus domestica MDP0000943251 N 0.839
mgf006505m Mimulus guttatus mgf006505m I 0.827
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.916
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.881
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.881
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.869
PK22475.1 Cannabis sativa PK22475.1 N 0.865
Pm013209 Prunus mume Pm013209 I 0.924
POPTR_0001s06330 Populus trichocarpa POPTR_0001s06330 N 0.855
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.941
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.869
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.924
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.930
SapurV1A.0504s0110 Salix purpurea SapurV1A.0504s0110 N 0.855
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.869
SapurV1A.2810s0010 Salix purpurea SapurV1A.2810s0010 N 0.855
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.893
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.881
TCM_029209 Theobroma cacao TCM_029209 I 0.888
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.846
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.909
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.839
VIT_09s0002g00720 Vitis vinifera VIT_09s0002g00720 N 0.856