ONIVA05G26860 (Oryza nivara)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 ONIVA05G26860 T249573_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.853 0.676
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.853 0.676
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA05G26860.1 MADF 51 128

Links

Other MADF family TFs
Other Oryza nivara TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29727.m000472 Ricinus communis 29727.m000472 I 0.000
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.000
AMTR_s00007p00263040 Amborella trichopoda AMTR_s00007p00263040 N 0.000
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.000
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.000
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.828
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I 0.000
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.000
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.000
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.000
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.000
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.000
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.000
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.000
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.000
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.000
Cla015773 Citrullus lanatus Cla015773 I 0.000
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.000
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.000
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.000
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.000
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.000
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.843
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.000
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.000
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.000
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.000
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.000
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.000
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.823
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.000
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.000
MDP0000097759 Malus domestica MDP0000097759 N 0.000
MDP0000255104 Malus domestica MDP0000255104 I 0.000
MDP0000281471 Malus domestica MDP0000281471 I 0.000
MDP0000943251 Malus domestica MDP0000943251 N 0.000
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.000
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.000
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.000
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.000
Pm013209 Prunus mume Pm013209 I 0.000
POPTR_0001s06330 Populus trichocarpa POPTR_0001s06330 N 0.000
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.000
PRUPE_ppa010427mg Prunus persica PRUPE_ppa010427mg I 0.000
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.000
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.000
SapurV1A.0504s0110 Salix purpurea SapurV1A.0504s0110 N 0.000
SapurV1A.2810s0010 Salix purpurea SapurV1A.2810s0010 N 0.000
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.000
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.000
TCM_029209 Theobroma cacao TCM_029209 I 0.000
TCM_042467 Theobroma cacao TCM_042467 N 0.860
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.000
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.819
VIT_09s0002g00720 Vitis vinifera VIT_09s0002g00720 N 0.000