CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CaO19.4662
(
Candida albicans
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
CaO19.4662
T253465_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SMP1
M01557_2.00
Saccharomyces cerevisiae
TTAATAAA
TTTATTAA
PBM
Zhu et al.(2009)
Smp1
0.792
0.792
SMP1
M08587_2.00
Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV
Misc
DeBoer et al.(2011)
YBR182C_864
0.792
0.792
RLM1
M08590_2.00
Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN
Misc
DeBoer et al.(2011)
YPL089C_419
0.729
0.729
RLM1
M08459_2.00
Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN
COMPILED
Mathelier et al.(2014)
MA0369.1
0.729
0.729
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EAL03997
MADS box
10
57
PLTDDRNRTVTFVKRKAGLFKKAHELAVLCQVDLTVIIVGNNNKVYEY
Links
Other
MADS box
family TFs
Other
Candida albicans
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29729.m002292
Ricinus communis
29729.m002292
I
0.000
Aquca_013_00679
Aquilegia coerulea
Aquca_013_00679
I
0.000
Aquca_030_00214
Aquilegia coerulea
Aquca_030_00214
I
0.000
BGIOSGA002846
Oryza indica
BGIOSGA002846
I
0.000
BGIOSGA026461
Oryza indica
BGIOSGA026461
I
0.000
BGIOSGA026464
Oryza indica
BGIOSGA026464
I
0.000
Bo1g141310
Brassica oleracea
Bo1g141310
I
0.000
Bo3g063910
Brassica oleracea
Bo3g063910
I
0.000
Bostr.23794s0027
Boechera stricta
Bostr.23794s0027
I
0.000
Bra001386
Brassica rapa
Bra001386
I
0.000
Bra034159
Brassica rapa
Bra034159
I
0.000
BRADI2G04000
Brachypodium distachyon
BRADI2G04000
I
0.000
BRADI2G29960
Brachypodium distachyon
BRADI2G29960
I
0.000
BRADI3G12680
Brachypodium distachyon
BRADI3G12680
I
0.000
cassava19475.valid.m1
Manihot esculenta
cassava19475.valid.m1
I
0.000
Ciclev10032029m.g
Citrus clementina
Ciclev10032029m.g
I
0.000
Cla001755
Citrullus lanatus
Cla001755
I
0.000
Cla006713
Citrullus lanatus
Cla006713
I
0.000
Cucsa.119440
Cucumis sativus
Cucsa.119440
I
0.000
Cucsa.136780
Cucumis sativus
Cucsa.136780
I
0.000
Eucgr.G03094
Eucalyptus grandis
Eucgr.G03094
I
0.000
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
0.000
F775_01779
Aegilops tauschii
F775_01779
I
0.000
F775_02345
Aegilops tauschii
F775_02345
I
0.000
F775_05774
Aegilops tauschii
F775_05774
I
0.000
F775_32062
Aegilops tauschii
F775_32062
I
0.000
gene21047-v1.0-hybrid
Fragaria vesca
gene21047-v1.0-hybrid
I
0.000
GLYMA06G45680
Glycine max
GLYMA06G45680
I
0.000
GLYMA12G32400
Glycine max
GLYMA12G32400
I
0.000
GLYMA13G38030
Glycine max
GLYMA13G38030
I
0.000
GRMZM2G006745
Zea mays
GRMZM2G006745
I
0.000
GSMUA_Achr11G24820_001
Musa acuminata
GSMUA_Achr11G24820_001
I
0.000
GSMUA_Achr5G28050_001
Musa acuminata
GSMUA_Achr5G28050_001
I
0.000
GSMUA_Achr9G04630_001
Musa acuminata
GSMUA_Achr9G04630_001
I
0.000
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.000
LPERR01G03760
Leersia perrieri
LPERR01G03760
I
0.000
LPERR05G09930
Leersia perrieri
LPERR05G09930
I
0.000
LPERR08G12790
Leersia perrieri
LPERR08G12790
I
0.000
LPERR08G20650
Leersia perrieri
LPERR08G20650
I
0.000
Lus10010632.g
Linum usitatissimum
Lus10010632.g
I
0.000
Lus10023633.g
Linum usitatissimum
Lus10023633.g
I
0.000
Lus10034902.g
Linum usitatissimum
Lus10034902.g
I
0.000
MDP0000147009
Malus domestica
MDP0000147009
I
0.000
MDP0000165880
Malus domestica
MDP0000165880
I
0.000
MDP0000446783
Malus domestica
MDP0000446783
I
0.000
MLOC_12223
Hordeum vulgare
MLOC_12223
I
0.000
MLOC_66580
Hordeum vulgare
MLOC_66580
I
0.000
MLOC_66686
Hordeum vulgare
MLOC_66686
I
0.000
MLOC_77405
Hordeum vulgare
MLOC_77405
I
0.000
MTR_5g083340
Medicago truncatula
MTR_5g083340
I
0.000
OB01G13930
Oryza brachyantha
OB01G13930
I
0.000
OB05G20700
Oryza brachyantha
OB05G20700
I
0.000
OB08G30790
Oryza brachyantha
OB08G30790
I
0.000
OBART01G04210
Oryza barthii
OBART01G04210
I
0.000
OGLUM01G04560
Oryza glumaepatula
OGLUM01G04560
I
0.000
OGLUM08G25470
Oryza glumaepatula
OGLUM08G25470
I
0.000
OLONG_014228
Oryza longistaminata
OLONG_014228
I
0.000
OMERI01G04110
Oryza meridionalis
OMERI01G04110
I
0.000
OMERI08G18820
Oryza meridionalis
OMERI08G18820
I
0.000
ONIVA01G04630
Oryza nivara
ONIVA01G04630
I
0.000
ONIVA09G01190
Oryza nivara
ONIVA09G01190
I
0.000
OPUNC01G03970
Oryza punctata
OPUNC01G03970
I
0.000
OPUNC08G21890
Oryza punctata
OPUNC08G21890
I
0.000
orange1.1g019546m.g
Citrus sinensis
orange1.1g019546m.g
I
0.000
ORGLA01G0037700
Oryza glaberrima
ORGLA01G0037700
I
0.000
ORGLA08G0193700
Oryza glaberrima
ORGLA08G0193700
I
0.000
ORUFI01G04360
Oryza rufipogon
ORUFI01G04360
I
0.000
ORUFI08G26490
Oryza rufipogon
ORUFI08G26490
I
0.000
DREB2A
Oryza sativa
OS01G0165000
I
0.000
DREB2C
Oryza sativa
OS08G0565200
I
0.000
Pavir.Ca01725
Panicum virgatum
Pavir.Ca01725
I
0.000
Pavir.Cb01298
Panicum virgatum
Pavir.Cb01298
I
0.000
Pavir.J22169
Panicum virgatum
Pavir.J22169
I
0.000
Pavir.J25464
Panicum virgatum
Pavir.J25464
I
0.000
Pavir.J37967
Panicum virgatum
Pavir.J37967
I
0.000
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
0.000
PK07402.1
Cannabis sativa
PK07402.1
D
0.000
Pm018989
Prunus mume
Pm018989
I
0.000
POPTR_0008s07360
Populus trichocarpa
POPTR_0008s07360
I
0.000
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.000
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
0.000
PRUPE_ppa022996mg
Prunus persica
PRUPE_ppa022996mg
I
0.000
Q1ESI9_MAIZE
Zea mays
Q1ESI9_MAIZE
D
0.000
Q84JE9_HORVU
Hordeum vulgare
Q84JE9_HORVU
D
0.000
Q84ND8_HORVU
Hordeum vulgare
Q84ND8_HORVU
D
0.000
Q8H769_WHEAT
Triticum aestivum
Q8H769_WHEAT
D
0.000
SapurV1A.0673s0120
Salix purpurea
SapurV1A.0673s0120
I
0.000
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
0.000
SapurV1A.1420s0050
Salix purpurea
SapurV1A.1420s0050
I
0.000
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
0.000
Sb09g016150
Sorghum bicolor
Sb09g016150
I
0.000
Si022619m.g
Setaria italica
Si022619m.g
I
0.000
Si024059m.g
Setaria italica
Si024059m.g
I
0.000
TCM_026121
Theobroma cacao
TCM_026121
I
0.000
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
0.000
TRAES3BF064700080CFD_g
Triticum aestivum
TRAES3BF064700080CFD_g
I
0.000
Traes_1AL_A9FB6BF52
Triticum aestivum
Traes_1AL_A9FB6BF52
I
0.000
Traes_1BL_BDF0801D01
Triticum aestivum
Traes_1BL_BDF0801D01
I
0.000
Traes_2AL_3FB37A3E7
Triticum aestivum
Traes_2AL_3FB37A3E7
I
0.000
Traes_2BL_B397F2CE3
Triticum aestivum
Traes_2BL_B397F2CE3
I
0.000
Traes_2DL_B32203C91
Triticum aestivum
Traes_2DL_B32203C91
I
0.000
Traes_3AS_62742A0471
Triticum aestivum
Traes_3AS_62742A0471
I
0.000
TRIUR3_17409
Triticum urartu
TRIUR3_17409
I
0.000
TRIUR3_17973
Triticum urartu
TRIUR3_17973
I
0.000
VIT_13s0067g01960
Vitis vinifera
VIT_13s0067g01960
I
0.000