PGSC0003DMG400026176 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400026176 T277681_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400067318 Myb 14 61
PGSC0003DMT400067318 Myb 67 112

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29933.m001454 Ricinus communis 29933.m001454 N 0.664
Bo8g105490 Brassica oleracea Bo8g105490 I 0.662
Bo9g076410 Brassica oleracea Bo9g076410 I 0.674
Bostr.7128s0256 Boechera stricta Bostr.7128s0256 I 0.662
Bra026720 Brassica rapa Bra026720 I 0.662
Bra029553 Brassica rapa Bra029553 I 0.674
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.662
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.662
cassava14699.m1 Manihot esculenta cassava14699.m1 I 0.679
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.669
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.678
Ca_12130 Cicer arietinum Ca_12130 I 0.672
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.662
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.740
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.695
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.687
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.681
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.693
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.674
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.666
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.662
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.665
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.671
GLYMA02G00820 Glycine max GLYMA02G00820 I 0.669
GLYMA02G12254 Glycine max GLYMA02G12254 I 0.671
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.709
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.701
GLYMA10G00930 Glycine max GLYMA10G00930 I 0.669
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.666
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.684
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.699
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.778
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.683
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.666
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.675
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.664
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.665
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.666
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.695
GRMZM2G048295 Zea mays GRMZM2G048295 I 0.662
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I 0.683
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.695
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I 0.666
GSMUA_Achr6G31520_001 Musa acuminata GSMUA_Achr6G31520_001 I 0.688
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.667
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.681
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.680
MDP0000131822 Malus domestica MDP0000131822 I 0.665
MDP0000155426 Malus domestica MDP0000155426 I 0.680
MDP0000407613 Malus domestica MDP0000407613 N 0.663
MTR_0063s0090 Medicago truncatula MTR_0063s0090 N 0.669
MTR_1g043050 Medicago truncatula MTR_1g043050 I 0.677
MTR_1g043080 Medicago truncatula MTR_1g043080 I 0.662
MTR_1g076150 Medicago truncatula MTR_1g076150 I 0.672
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.716
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.674
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.704
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I 0.662
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.662
PGSC0003DMG400011250 Solanum tuberosum PGSC0003DMG400011250 I 0.694
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.663
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.751
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.757
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.855
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.844
PK20358.1 Cannabis sativa PK20358.1 I 0.683
Pm015302 Prunus mume Pm015302 N 0.689
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.665
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.743
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.689
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.665
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.734
Sb06g022660 Sorghum bicolor Sb06g022660 I 0.662
Si010384m.g Setaria italica Si010384m.g I 0.662
Si010814m.g Setaria italica Si010814m.g I 0.662
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.858
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.848
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.787
Solyc07g055000.1 Solanum lycopersicum Solyc07g055000.1 N 0.870
Solyc08g076710.2 Solanum lycopersicum Solyc08g076710.2 I 0.665
Solyc10g005460.2 Solanum lycopersicum Solyc10g005460.2 I 0.706
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.751
TCM_007865 Theobroma cacao TCM_007865 I 0.699
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.662
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.689
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.662