CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTGUG00000002760
(
Taeniopygia guttata
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSTGUG00000002760
T304927_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ar
M00821_2.00
Mus musculus
NRRGAACAYN
NRTGTTCYYN
PBM
Weirauch et al.(2013)
pTH1739
0.992
1.000
AR
M03389_2.00
Homo sapiens
DRGWACRHVDYGTWCCY
RGGWACRHBDYGTWCYH
SELEX
Jolma et al.(2013)
AR_1
0.992
1.000
AR
M03390_2.00
Homo sapiens
DRGWACAYNRTGTWCYY
RRGWACAYNRTGTWCYH
SELEX
Jolma et al.(2013)
AR_2
0.992
1.000
Ar
M03436_2.00
Mus musculus
NRGHACAYNVYGTWCYN
NRGWACRBNRTGTDCYN
SELEX
Jolma et al.(2013)
Ar_1
0.992
1.000
AR
M09288_2.00
Homo sapiens
DRYAAAYADNNNRGNACA
TGTNCYNNNHTRTTTRYH
Misc
Kulakovskiy et al.(2013)
ANDR_HUMAN.H11MO.0.A
0.992
1.000
Ar
M09331_2.00
Mus musculus
NRGNACABRVTGTNCY
RGNACABYVTGTNCYN
Misc
Kulakovskiy et al.(2013)
ANDR_MOUSE.H11MO.0.A
0.992
1.000
AR
M09610_2.00
Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN
Misc
Heinz et al.(2010)
LNCAP-AR_GSE27824
0.992
1.000
AR
M09609_2.00
Homo sapiens
SHDRGVACAS
STGTBCYHDS
Misc
Heinz et al.(2010)
LNCaP-AR_GSE27824
0.992
1.000
AR
M11157_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_01
0.992
1.000
AR
M11158_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_02
0.992
1.000
AR
M11159_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_03
0.992
1.000
AR
M11160_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_04
0.992
1.000
AR
M11161_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_11
0.992
1.000
AR
M11162_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_13
0.992
1.000
AR
M11163_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_14_H
0.992
1.000
AR
M11164_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q2
0.992
1.000
AR
M11165_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q6_01
0.992
1.000
AR
M11166_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q6
0.992
1.000
NR3C1
M03366_2.00
Homo sapiens
NRGWACAYNRTGTWCYH
DRGWACAYNRTGTWCYN
SELEX
Jolma et al.(2013)
NR3C1_1
0.978
0.786
NR3C1
M05587_2.00
Homo sapiens
RGDACAYWDTGTHCY
RGDACAHWRTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_HT-SELEX
0.978
0.786
NR3C1
M07986_2.00
Homo sapiens
DGNACABYBTGTNC
GNACAVRVTGTNCH
ChIP-seq
Gerstein et al.(2012)
A549_GR_HudsonAlpha
0.978
0.786
NR3C1
M07987_2.00
Homo sapiens
NNNNRGNACAYBBTGTHCYNN
NNRGDACAVVRTGTNCYNNNN
ChIP-seq
Gerstein et al.(2012)
ECC-1_GR_HudsonAlpha
0.978
0.786
NR3C1
M09270_2.00
Homo sapiens
DGNACABKNTGTNCY
RGNACANMVTGTNCH
Misc
Kulakovskiy et al.(2013)
GCR_HUMAN.H11MO.0.A
0.978
0.786
NR3C1
M09607_2.00
Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN
Misc
Heinz et al.(2010)
A549-GR_GSE32465
0.978
0.786
NR3C1
M11119_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_01
0.978
0.786
NR3C1
M11120_2.00
Homo sapiens
KKYACMRDVTGTYCTK
MAGRACABHYKGTRMM
Transfac
Matys et al.(2006)
V$GRE_C
0.978
0.786
NR3C1
M11121_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q4
0.978
0.786
NR3C1
M11122_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_01
0.978
0.786
NR3C1
M11123_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_02
0.978
0.786
NR3C1
M11124_2.00
Homo sapiens
NNWGVACANWDNNDNBHNN
NNDVNHNNHWNTGTBCWNN
Transfac
Matys et al.(2006)
V$GR_Q6
0.978
0.786
NR3C1
M11125_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR3C1_04
0.978
0.786
NR3C1
M05588_2.00
Homo sapiens
RGDACANDRYGTHCY
RGDACRYHNTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_Methyl-HT-SELEX
0.978
0.786
PGR
M03923_2.00
Homo sapiens
DGNACANNNYGTNCY
RGNACRNNNTGTNCH
SELEX
Nitta et al.(2015)
PGR_1
0.977
0.800
PGR
M09266_2.00
Homo sapiens
RGNACWBYBTGTNCYN
NRGNACAVRVWGTNCY
Misc
Kulakovskiy et al.(2013)
PRGR_HUMAN.H11MO.0.A
0.977
0.800
Pgr
M09326_2.00
Mus musculus
RGNACWBYNTGTNCY
RGNACANRVWGTNCY
Misc
Kulakovskiy et al.(2013)
PRGR_MOUSE.H11MO.0.A
0.977
0.800
PGR
M09603_2.00
Homo sapiens
RNACWNNNWGTNCHN
NDGNACWNNNWGTNY
Misc
Heinz et al.(2010)
T47D-PR_GSE31130
0.977
0.800
PGR
M11095_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_01
0.977
0.800
PGR
M11096_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_02
0.977
0.800
PGR
M11097_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_Q6
0.977
0.800
NR3C2
M02395_2.00
Homo sapiens
NNRGDACAN
NTGTHCYNN
PBM
Weirauch et al.(2014)
pTH5924
0.974
0.771
NR3C2
M03382_2.00
Homo sapiens
NRGDACAHDRTGTHCYN
NRGDACAYHDTGTHCYN
SELEX
Jolma et al.(2013)
NR3C2_1
0.974
0.771
NR3C2
M05637_2.00
Homo sapiens
NGNACRNNNYGTNCN
NGNACRNNNYGTNCN
SELEX
Yin et al.(2017)
NR3C2_eDBD_HT-SELEX
0.974
0.771
NR3C2
M05638_2.00
Homo sapiens
NGNACRNNVYGTNCN
NGNACRBNNYGTNCN
SELEX
Yin et al.(2017)
NR3C2_eDBD_Methyl-HT-SELEX
0.974
0.771
Nr3c1
M05886_2.00
Mus musculus
DGDACDBYNTGTNCY
RGNACANRVHGTHCH
SMiLE-seq
Isakova et al.(2017)
GR
0.974
0.771
Nr3c1
M09318_2.00
Mus musculus
RGNACABYNTGTNCY
RGNACANRVTGTNCY
Misc
Kulakovskiy et al.(2013)
GCR_MOUSE.H11MO.0.A
0.974
0.771
Nr3c1
M09614_2.00
Mus musculus
NRGDACABNNTGTNC
GNACANNVTGTHCYN
Misc
Heinz et al.(2010)
RAW264.7-GRE_Unpublished
0.974
0.771
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000002859
Nuclear receptor
58
127
KTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGMTL
Links
Other
Nuclear receptor
family TFs
Other
Taeniopygia guttata
TFs
271 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30147.m013749
Ricinus communis
30147.m013749
N
Al_scaffold_0002_1204
Arabidopsis lyrata
Al_scaffold_0002_1204
N
MYB114
Arabidopsis thaliana
AT1G66380
I
AtMYB10
Arabidopsis thaliana
AT3G12820
D
MYB21
Arabidopsis thaliana
AT3G27810
I
ATMYB48
Arabidopsis thaliana
AT3G46130
I
MYB94
Arabidopsis thaliana
AT3G47600
D
MYB27
Arabidopsis thaliana
AT3G53200
D
WER
Arabidopsis thaliana
AT5G14750
D
MYB86
Arabidopsis thaliana
AT5G26660
I
TT2
Arabidopsis thaliana
AT5G35550
I
MYB24
Arabidopsis thaliana
AT5G40350
D
MYB59
Arabidopsis thaliana
AT5G59780
D
BGIOSGA002307
Oryza indica
BGIOSGA002307
N
BGIOSGA013008
Oryza indica
BGIOSGA013008
N
BGIOSGA027658
Oryza indica
BGIOSGA027658
N
BGIOSGA037085
Oryza indica
BGIOSGA037085
N
Bo2g011790
Brassica oleracea
Bo2g011790
N
Bo5g131980
Brassica oleracea
Bo5g131980
N
Bostr.18473s0331
Boechera stricta
Bostr.18473s0331
I
Bostr.26833s0259
Boechera stricta
Bostr.26833s0259
N
Bostr.3125s0001
Boechera stricta
Bostr.3125s0001
N
Bra009910
Brassica rapa
Bra009910
N
Bra031041
Brassica rapa
Bra031041
N
BRADI1G45510
Brachypodium distachyon
BRADI1G45510
I
BRADI2G11080
Brachypodium distachyon
BRADI2G11080
I
BRADI4G09490
Brachypodium distachyon
BRADI4G09490
N
Cagra.10637s0001
Capsella grandiflora
Cagra.10637s0001
I
Cagra.1317s0038
Capsella grandiflora
Cagra.1317s0038
N
Cagra.1390s0010
Capsella grandiflora
Cagra.1390s0010
I
Cagra.1655s0054
Capsella grandiflora
Cagra.1655s0054
N
Cagra.17198s0001
Capsella grandiflora
Cagra.17198s0001
N
Cagra.2519s0060
Capsella grandiflora
Cagra.2519s0060
N
cassava11833.valid.m1
Manihot esculenta
cassava11833.valid.m1
N
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
Ciclev10029019m.g
Citrus clementina
Ciclev10029019m.g
N
Cucsa.061660
Cucumis sativus
Cucsa.061660
I
Cucsa.379880
Cucumis sativus
Cucsa.379880
I
Eucgr.D02099
Eucalyptus grandis
Eucgr.D02099
N
Eucgr.J02073
Eucalyptus grandis
Eucgr.J02073
N
evm.TU.contig_33658
Carica papaya
evm.TU.contig_33658
N
evm.TU.supercontig_87.85
Carica papaya
evm.TU.supercontig_87.85
N
F775_22650
Aegilops tauschii
F775_22650
N
F775_32151
Aegilops tauschii
F775_32151
N
gene13970-v1.0-hybrid
Fragaria vesca
gene13970-v1.0-hybrid
N
GLYMA08G44950
Glycine max
GLYMA08G44950
N
GLYMA16G00920
Glycine max
GLYMA16G00920
I
Gorai.001G107900
Gossypium raimondii
Gorai.001G107900
I
Gorai.001G268000
Gossypium raimondii
Gorai.001G268000
I
Gorai.008G192900
Gossypium raimondii
Gorai.008G192900
I
Gorai.013G139200
Gossypium raimondii
Gorai.013G139200
I
GRMZM2G001223
Zea mays
GRMZM2G001223
I
GRMZM2G106558
Zea mays
GRMZM2G106558
I
GRMZM2G130149
Zea mays
GRMZM2G130149
I
LjSGA_032074.1
Lotus japonicus
LjSGA_032074.1
N
LjSGA_148662.1
Lotus japonicus
LjSGA_148662.1
N
MDP0000139931
Malus domestica
MDP0000139931
N
MDP0000153773
Malus domestica
MDP0000153773
N
MDP0000169874
Malus domestica
MDP0000169874
N
MDP0000242612
Malus domestica
MDP0000242612
N
MDP0000475808
Malus domestica
MDP0000475808
N
mgf001247m
Mimulus guttatus
mgf001247m
N
mgf009707m
Mimulus guttatus
mgf009707m
N
mgf018110m
Mimulus guttatus
mgf018110m
N
mgf021749m
Mimulus guttatus
mgf021749m
N
MLOC_13019
Hordeum vulgare
MLOC_13019
I
MLOC_16981
Hordeum vulgare
MLOC_16981
I
MLOC_17928
Hordeum vulgare
MLOC_17928
I
MLOC_56753
Hordeum vulgare
MLOC_56753
I
MTR_2g096380
Medicago truncatula
MTR_2g096380
I
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
MTR_6g055910
Medicago truncatula
MTR_6g055910
I
MTR_7g111290
Medicago truncatula
MTR_7g111290
I
OBART12G16130
Oryza barthii
OBART12G16130
N
OGLUM12G17720
Oryza glumaepatula
OGLUM12G17720
N
orange1.1g023677m.g
Citrus sinensis
orange1.1g023677m.g
I
orange1.1g044587m.g
Citrus sinensis
orange1.1g044587m.g
N
ORGLA01G0040600
Oryza glaberrima
ORGLA01G0040600
N
OS01G0975300
Oryza sativa
OS01G0975300
N
Pavir.Fa00877
Panicum virgatum
Pavir.Fa00877
I
Pavir.Gb01276
Panicum virgatum
Pavir.Gb01276
N
Pavir.Gb02200
Panicum virgatum
Pavir.Gb02200
I
Pavir.Ha00303
Panicum virgatum
Pavir.Ha00303
I
Pavir.Ia02093
Panicum virgatum
Pavir.Ia02093
N
Pavir.J19088
Panicum virgatum
Pavir.J19088
N
Pavir.J23620
Panicum virgatum
Pavir.J23620
N
Pavir.J24653
Panicum virgatum
Pavir.J24653
N
PDK_20s1316381g001
Phoenix dactylifera
PDK_20s1316381g001
N
PDK_20s1338951g004
Phoenix dactylifera
PDK_20s1338951g004
N
PDK_20s1354851g002
Phoenix dactylifera
PDK_20s1354851g002
N
PDK_20s1376841g001
Phoenix dactylifera
PDK_20s1376841g001
N
PDK_20s1415541g003
Phoenix dactylifera
PDK_20s1415541g003
N
PDK_20s1528141g001
Phoenix dactylifera
PDK_20s1528141g001
N
PDK_20s1933711g001
Phoenix dactylifera
PDK_20s1933711g001
N
PK27824.1
Cannabis sativa
PK27824.1
N
Pm029438
Prunus mume
Pm029438
N
POPTR_0006s23810
Populus trichocarpa
POPTR_0006s23810
I
PRUPE_ppa008906mg
Prunus persica
PRUPE_ppa008906mg
I
SapurV1A.0040s0010
Salix purpurea
SapurV1A.0040s0010
I
SapurV1A.0093s0250
Salix purpurea
SapurV1A.0093s0250
I
SapurV1A.0177s0130
Salix purpurea
SapurV1A.0177s0130
I
SapurV1A.0263s0400
Salix purpurea
SapurV1A.0263s0400
I
SapurV1A.0489s0220
Salix purpurea
SapurV1A.0489s0220
I
SapurV1A.0552s0030
Salix purpurea
SapurV1A.0552s0030
I
SapurV1A.1387s0090
Salix purpurea
SapurV1A.1387s0090
I
Sb08g018580
Sorghum bicolor
Sb08g018580
I
Si003873m.g
Setaria italica
Si003873m.g
N
TCM_005371
Theobroma cacao
TCM_005371
I
TCM_013983
Theobroma cacao
TCM_013983
I
TCM_021433
Theobroma cacao
TCM_021433
I
TCM_032927
Theobroma cacao
TCM_032927
I
Thhalv10014524m.g
Eutrema salsugineum
Thhalv10014524m.g
I
Traes_2BL_DAA2104F5
Triticum aestivum
Traes_2BL_DAA2104F5
N
Traes_2DL_304E62CCE
Triticum aestivum
Traes_2DL_304E62CCE
N
Traes_2DS_EEE59C2E7
Triticum aestivum
Traes_2DS_EEE59C2E7
N
Traes_3DL_75F8A05CF
Triticum aestivum
Traes_3DL_75F8A05CF
N
Traes_5AS_7D519210E
Triticum aestivum
Traes_5AS_7D519210E
N
Traes_5AS_D9A4C1AB0
Triticum aestivum
Traes_5AS_D9A4C1AB0
N
Traes_5BS_D1C03C165
Triticum aestivum
Traes_5BS_D1C03C165
N
Traes_5DS_1EF547639
Triticum aestivum
Traes_5DS_1EF547639
N
TRIUR3_12300
Triticum urartu
TRIUR3_12300
N
TRIUR3_32110
Triticum urartu
TRIUR3_32110
N
TRIUR3_33813
Triticum urartu
TRIUR3_33813
N
VIT_02s0033g00460
Vitis vinifera
VIT_02s0033g00460
N