CBN19486 (Caenorhabditis brenneri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CBN19486 T326909_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CBN19486 Sox 4 38

Links

Other Sox family TFs
Other Caenorhabditis brenneri TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
67303 Aureococcus anophagefferens 67303 N 0.429
AALB009772 Anopheles albimanus AALB009772 N 0.488
AALB009867 Anopheles albimanus AALB009867 N 0.472
Aan_R006397 Calypte anna Aan_R006397 N 0.521
ACOM022799 Anopheles coluzzii ACOM022799 N 0.472
ACUA010594 Anopheles culicifacies ACUA010594 N 0.472
ADIR005631 Anopheles dirus ADIR005631 N 0.472
AEPI003629 Anopheles epiroticus AEPI003629 N 0.472
Afo_R011382 Aptenodytes forsteri Afo_R011382 N 0.521
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.438
AFUN010198 Anopheles funestus AFUN010198 N 0.472
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.438
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.469
AMEM007694 Anopheles merus AMEM007694 N 0.472
AMIN009302 Anopheles minimus AMIN009302 N 0.472
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.445
AQUA001261 Anopheles quadriannulatus AQUA001261 N 0.472
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.472
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.472
Brh_R007868 Buceros rhinoceros Brh_R007868 N 0.521
CBN25334 Caenorhabditis brenneri CBN25334 N 0.502
CLEC006960 Cimex lectularius CLEC006960 N 0.472
CMQ_5875 Grosmannia clavigera CMQ_5875 N 0.464
CPIJ012041 Culex quinquefasciatus CPIJ012041 N 0.472
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N 0.472
DAPPUDRAFT_259784 Daphnia pulex DAPPUDRAFT_259784 N 0.469
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.452
DDB_G0287433 Dictyostelium discoideum DDB_G0287433 N 0.416
DILT_0001419401 Diphyllobothrium latum DILT_0001419401 N 0.429
EDI_065970 Entamoeba dispar EDI_065970 N 0.465
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.446
EMIHUDRAFT_107556 Emiliania huxleyi EMIHUDRAFT_107556 N 0.441
EMIHUDRAFT_468050 Emiliania huxleyi EMIHUDRAFT_468050 N 0.445
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I 0.438
ENSAPLG00000008530 Anas platyrhynchos ENSAPLG00000008530 N 0.521
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.438
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.435
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N 0.438
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.438
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N 0.521
SOX2 Felis catus ENSFCAG00000029205 I 0.438
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N 0.521
ENSMGAG00000006336 Meleagris gallopavo ENSMGAG00000006336 N 0.521
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.438
Hmg20b Mus musculus ENSMUSG00000020232 D 0.429
Sox17 Mus musculus ENSMUSG00000025902 D 0.444
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.463
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.438
SOX2 Procavia capensis ENSPCAG00000003690 I 0.438
SOX18 Procavia capensis ENSPCAG00000015663 N 0.438
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N 0.521
SOX18 Pan troglodytes ENSPTRG00000030459 I 0.438
SOX17 Sorex araneus ENSSARG00000009573 I 0.444
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I 0.444
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.446
F443_09320 Phytophthora parasitica F443_09320 N 0.436
GA28914 Drosophila pseudoobscura FBgn0250273 N 0.435
fgenesh1_pm.C_scaffold_23000166 Phytophthora capsici fgenesh1_pm.C_scaffold_23000166 N 0.469
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N 0.469
Gfo_R008143 Geospiza fortis Gfo_R008143 N 0.521
GLOINDRAFT_31865 Rhizophagus irregularis GLOINDRAFT_31865 N 0.445
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.429
GLOINDRAFT_347803 Rhizophagus irregularis GLOINDRAFT_347803 N 0.418
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.438
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N 0.499
GPLIN_001054700 Globodera pallida GPLIN_001054700 N 0.450
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.462
HHAL001293-PA Halyomorpha halys HHAL001293-PA N 0.431
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.444
HmN_000301900 Hymenolepis microstoma HmN_000301900 N 0.429
JL09_g5343 Pichia kudriavzevii JL09_g5343 N 0.442
L798_00185 Zootermopsis nevadensis L798_00185 N 0.432
L798_05432 Zootermopsis nevadensis L798_05432 N 0.442
L798_12046 Zootermopsis nevadensis L798_12046 N 0.472
LbrM.21.1660 Leishmania braziliensis LbrM.21.1660 N 0.534
LCUP001586 Lucilia cuprina LCUP001586 N 0.471
LDEC017494 Leptinotarsa decemlineata LDEC017494 N 0.472
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.442
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N 0.477
M7I_1506 Glarea lozoyensis M7I_1506 N 0.496
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N 0.598
MESCA006364 Megaselia scalaris MESCA006364 N 0.447
Minc18937 Meloidogyne incognita Minc18937 N 0.429
MPER_06248 Moniliophthora perniciosa MPER_06248 N 0.429
MTR_6g048860 Medicago truncatula MTR_6g048860 N 0.480
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.442
Myotis_brandtii_TFAM_10031378 Myotis brandtii Myotis_brandtii_TFAM_10031378 N 0.432
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N 0.442
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.432
Ogr11176 Ophisaurus gracilis Ogr11176 N 0.442
orange1.1g036321m.g Citrus sinensis orange1.1g036321m.g N 0.477
Phyra76615 Phytophthora ramorum Phyra76615 N 0.429
Physo127875 Phytophthora sojae Physo127875 N 0.469
PPA22145 Pristionchus pacificus PPA22145 N 0.492
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.429
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.429
PTTG_03070 Puccinia triticina PTTG_03070 N 0.419
RPRC001038 Rhodnius prolixus RPRC001038 N 0.434
SINV19749 Solenopsis invicta SINV19749 N 0.520
SPU_021871 Strongylocentrotus purpuratus SPU_021871 N 0.453
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.546
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.437
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.437
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.450
TVAG_468590 Trichomonas vaginalis TVAG_468590 N 0.472
UCREL1_237 Eutypa lata UCREL1_237 N 0.449
yakG000714 Bos grunniens yakG000714 N 0.432
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.455