30192.m000545 (Ricinus communis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 30192.m000545 T344592_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.949 0.471
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.949 0.471
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.948 0.443
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.948 0.443
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.948 0.443
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.943 0.479
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.902 0.379
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.886 0.371
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.886 0.371
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.868 0.336
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.843 0.307
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.842 0.350
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.842 0.350
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.841 0.293
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30192.m000545 TCP 214 436

Links

Other TCP family TFs
Other Ricinus communis TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29661.m000926 Ricinus communis 29661.m000926 I
29706.m001328 Ricinus communis 29706.m001328 I
29812.m000204 Ricinus communis 29812.m000204 I
AMTR_s00036p00166880 Amborella trichopoda AMTR_s00036p00166880 I
Aquca_004_00181 Aquilegia coerulea Aquca_004_00181 I
Aquca_060_00026 Aquilegia coerulea Aquca_060_00026 I
AT1G17520 Arabidopsis thaliana AT1G17520 I
TRB1 Arabidopsis thaliana AT1G49950 D
AT1G72740 Arabidopsis thaliana AT1G72740 D
TRB3 Arabidopsis thaliana AT3G49850 I
TRB2 Arabidopsis thaliana AT5G67580 D
BGIOSGA003871 Oryza indica BGIOSGA003871 I
BGIOSGA004300 Oryza indica BGIOSGA004300 I
BGIOSGA035841 Oryza indica BGIOSGA035841 I
Bo1g081300 Brassica oleracea Bo1g081300 I
Bo3g096520 Brassica oleracea Bo3g096520 I
Bo3g178250 Brassica oleracea Bo3g178250 I
Bo3g184590 Brassica oleracea Bo3g184590 I
Bo5g023860 Brassica oleracea Bo5g023860 I
Bo5g077530 Brassica oleracea Bo5g077530 I
Bo6g018740 Brassica oleracea Bo6g018740 I
Bo6g116150 Brassica oleracea Bo6g116150 I
Bo8g067280 Brassica oleracea Bo8g067280 I
Bo8g104830 Brassica oleracea Bo8g104830 I
Bo9g019040 Brassica oleracea Bo9g019040 I
Bostr.0568s0184 Boechera stricta Bostr.0568s0184 I
Bostr.10273s0077 Boechera stricta Bostr.10273s0077 I
Bostr.26675s0174 Boechera stricta Bostr.26675s0174 I
Bostr.6864s0256 Boechera stricta Bostr.6864s0256 I
Bostr.7128s0363 Boechera stricta Bostr.7128s0363 I
Bra014227 Brassica rapa Bra014227 I
Bra016037 Brassica rapa Bra016037 I
Bra016598 Brassica rapa Bra016598 I
Bra018818 Brassica rapa Bra018818 I
Bra024438 Brassica rapa Bra024438 I
Bra025967 Brassica rapa Bra025967 I
Bra029978 Brassica rapa Bra029978 I
Bra030894 Brassica rapa Bra030894 I
Bra030992 Brassica rapa Bra030992 I
Bra037837 Brassica rapa Bra037837 I
Bra037839 Brassica rapa Bra037839 I
Bra039650 Brassica rapa Bra039650 I
BRADI2G42240 Brachypodium distachyon BRADI2G42240 I
BRADI2G47820 Brachypodium distachyon BRADI2G47820 I
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I
Cagra.0342s0046 Capsella grandiflora Cagra.0342s0046 I
Cagra.0824s0121 Capsella grandiflora Cagra.0824s0121 I
Cagra.1013s0027 Capsella grandiflora Cagra.1013s0027 I
Cagra.2826s0004 Capsella grandiflora Cagra.2826s0004 I
Cagra.4491s0006 Capsella grandiflora Cagra.4491s0006 I
Carubv10009836m.g Capsella rubella Carubv10009836m.g I
Carubv10009890m.g Capsella rubella Carubv10009890m.g I
Carubv10017722m.g Capsella rubella Carubv10017722m.g I
Carubv10020636m.g Capsella rubella Carubv10020636m.g I
Carubv10026874m.g Capsella rubella Carubv10026874m.g I
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I
cassava34930.m1 Manihot esculenta cassava34930.m1 I
cassava37744.valid.m1 Manihot esculenta cassava37744.valid.m1 I
cassava7508.valid.m1 Manihot esculenta cassava7508.valid.m1 I
Ca_02232 Cicer arietinum Ca_02232 I
Ca_08043 Cicer arietinum Ca_08043 I
Ca_09355 Cicer arietinum Ca_09355 I
Ciclev10026089m.g Citrus clementina Ciclev10026089m.g I
Ciclev10026245m.g Citrus clementina Ciclev10026245m.g I
Ciclev10028926m.g Citrus clementina Ciclev10028926m.g I
Cla006547 Citrullus lanatus Cla006547 I
Cla012798 Citrullus lanatus Cla012798 I
Cla014248 Citrullus lanatus Cla014248 I
Cucsa.103240 Cucumis sativus Cucsa.103240 I
Cucsa.298390 Cucumis sativus Cucsa.298390 I
Cucsa.341020 Cucumis sativus Cucsa.341020 I
Eucgr.H02312 Eucalyptus grandis Eucgr.H02312 I
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I
EuGene.0000030935 Micromonas pusilla EuGene.0000030935 I
EuGene.0500010080 Micromonas sp RCC299 EuGene.0500010080 I
EuGene.1300010252 Ostreococcus RCC809 EuGene.1300010252 I
evm.TU.supercontig_106.31 Carica papaya evm.TU.supercontig_106.31 I
evm.TU.supercontig_25.81 Carica papaya evm.TU.supercontig_25.81 I
TRB2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8002157 I
TRB1 Arabidopsis lyrata fgenesh2_kg.1__4077__AT1G49950.2 I
fgenesh2_kg.2__1540__AT1G72740.1 Arabidopsis lyrata fgenesh2_kg.2__1540__AT1G72740.1 I
TRB3 Arabidopsis lyrata fgenesh2_kg.5__1337__AT3G49850.1 I
gene05764-v1.0-hybrid Fragaria vesca gene05764-v1.0-hybrid I
gene07496-v1.0-hybrid Fragaria vesca gene07496-v1.0-hybrid I
gene12682-v1.0-hybrid Fragaria vesca gene12682-v1.0-hybrid I
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I
GLYMA01G40220 Glycine max GLYMA01G40220 I
GLYMA05G22500 Glycine max GLYMA05G22500 I
GLYMA07G00930 Glycine max GLYMA07G00930 I
GLYMA08G20270 Glycine max GLYMA08G20270 I
GLYMA09G03390 Glycine max GLYMA09G03390 I
GLYMA11G05070 Glycine max GLYMA11G05070 I
GLYMA15G14320 Glycine max GLYMA15G14320 I
GLYMA17G17370 Glycine max GLYMA17G17370 I
Gorai.003G030800 Gossypium raimondii Gorai.003G030800 I
Gorai.005G230800 Gossypium raimondii Gorai.005G230800 I
Gorai.007G224200 Gossypium raimondii Gorai.007G224200 I
Gorai.009G143000 Gossypium raimondii Gorai.009G143000 I
GRMZM2G023667 Zea mays GRMZM2G023667 I
GRMZM2G087817 Zea mays GRMZM2G087817 I
GRMZM2G108424 Zea mays GRMZM2G108424 I
GRMZM2G136887 Zea mays GRMZM2G136887 I
GSMUA_Achr2G13040_001 Musa acuminata GSMUA_Achr2G13040_001 I
GSMUA_Achr4G08670_001 Musa acuminata GSMUA_Achr4G08670_001 I
GSMUA_Achr4G09130_001 Musa acuminata GSMUA_Achr4G09130_001 I
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I
GSMUA_Achr7G01090_001 Musa acuminata GSMUA_Achr7G01090_001 I
GSMUA_Achr8G24960_001 Musa acuminata GSMUA_Achr8G24960_001 I
gw1.1.287.1 Physcomitrella patens gw1.1.287.1 I
gw1.176.27.1 Physcomitrella patens gw1.176.27.1 I
LjT25P15.150.nd Lotus japonicus LjT25P15.150.nd I
LPERR01G18090 Leersia perrieri LPERR01G18090 I
LPERR01G24270 Leersia perrieri LPERR01G24270 I
Lus10011546.g Linum usitatissimum Lus10011546.g I
Lus10014653.g Linum usitatissimum Lus10014653.g I
Lus10019260.g Linum usitatissimum Lus10019260.g I
Lus10033775.g Linum usitatissimum Lus10033775.g I
MDP0000234807 Malus domestica MDP0000234807 I
MDP0000239354 Malus domestica MDP0000239354 I
mgf000125m Mimulus guttatus mgf000125m I
mgf004823m Mimulus guttatus mgf004823m I
mgf007122m Mimulus guttatus mgf007122m I
mgf009594m Mimulus guttatus mgf009594m I
mgf010975m Mimulus guttatus mgf010975m I
MLOC_10278 Hordeum vulgare MLOC_10278 I
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I
MTR_1g041765 Medicago truncatula MTR_1g041765 I
MTR_2g031870 Medicago truncatula MTR_2g031870 I
MTR_4g097130 Medicago truncatula MTR_4g097130 I
MTR_5g015340 Medicago truncatula MTR_5g015340 I
MTR_8g092810 Medicago truncatula MTR_8g092810 I
MTR_8g494240 Medicago truncatula MTR_8g494240 I
OB01G30760 Oryza brachyantha OB01G30760 I
OB01G37330 Oryza brachyantha OB01G37330 I
OB12G25520 Oryza brachyantha OB12G25520 I
OBART01G21150 Oryza barthii OBART01G21150 I
OBART01G28260 Oryza barthii OBART01G28260 I
OBART12G18680 Oryza barthii OBART12G18680 I
OGLUM01G32190 Oryza glumaepatula OGLUM01G32190 I
OGLUM12G20330 Oryza glumaepatula OGLUM12G20330 I
OLONG_008332 Oryza longistaminata OLONG_008332 I
OLONG_008666 Oryza longistaminata OLONG_008666 I
OLONG_011068 Oryza longistaminata OLONG_011068 I
OMERI01G19490 Oryza meridionalis OMERI01G19490 I
OMERI01G19510 Oryza meridionalis OMERI01G19510 I
OMERI05G07460 Oryza meridionalis OMERI05G07460 I
ONIVA01G23780 Oryza nivara ONIVA01G23780 I
ONIVA01G32190 Oryza nivara ONIVA01G32190 I
ONIVA12G17630 Oryza nivara ONIVA12G17630 I
OPUNC01G21220 Oryza punctata OPUNC01G21220 I
OPUNC01G28080 Oryza punctata OPUNC01G28080 I
OPUNC12G16890 Oryza punctata OPUNC12G16890 I
orange1.1g020653m.g Citrus sinensis orange1.1g020653m.g I
orange1.1g022048m.g Citrus sinensis orange1.1g022048m.g I
orange1.1g023740m.g Citrus sinensis orange1.1g023740m.g I
ORGLA01G0168300 Oryza glaberrima ORGLA01G0168300 I
ORGLA01G0233700 Oryza glaberrima ORGLA01G0233700 I
ORGLA12G0159400 Oryza glaberrima ORGLA12G0159400 I
ORUFI01G23880 Oryza rufipogon ORUFI01G23880 I
ORUFI01G31370 Oryza rufipogon ORUFI01G31370 I
ORUFI12G20880 Oryza rufipogon ORUFI12G20880 I
OS01G0589300 Oryza sativa OS01G0589300 I
OS01G0708000 Oryza sativa OS01G0708000 D
OS12G0613300 Oryza sativa OS12G0613300 I
OSTLU_27049 Ostreococcus lucimarinus OSTLU_27049 I
Pavir.Ea02064 Panicum virgatum Pavir.Ea02064 I
Pavir.Ea02570 Panicum virgatum Pavir.Ea02570 I
Pavir.Eb02802 Panicum virgatum Pavir.Eb02802 I
Pavir.J27218 Panicum virgatum Pavir.J27218 I
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I
PDK_20s1888511g002 Phoenix dactylifera PDK_20s1888511g002 I
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I
PGSC0003DMG401025742 Solanum tuberosum PGSC0003DMG401025742 I
PGSC0003DMG402003328 Solanum tuberosum PGSC0003DMG402003328 I
PK00568.1 Cannabis sativa PK00568.1 I
PK06103.1 Cannabis sativa PK06103.1 D
PK19870.1 Cannabis sativa PK19870.1 I
Pm002374 Prunus mume Pm002374 I
Pm013309 Prunus mume Pm013309 I
Pm021139 Prunus mume Pm021139 I
Pm027209 Prunus mume Pm027209 I
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I
POPTR_0007s14920 Populus trichocarpa POPTR_0007s14920 I
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I
POPTR_0014s01010 Populus trichocarpa POPTR_0014s01010 I
PRUPE_ppa007796mg Prunus persica PRUPE_ppa007796mg I
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I
PRUPE_ppa016498mg Prunus persica PRUPE_ppa016498mg I
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I
SapurV1A.0235s0100 Salix purpurea SapurV1A.0235s0100 I
SapurV1A.1368s0050 Salix purpurea SapurV1A.1368s0050 I
Sb03g026470 Sorghum bicolor Sb03g026470 I
Sb03g032530 Sorghum bicolor Sb03g032530 I
scaffold_101953.1 Arabidopsis lyrata scaffold_101953.1 I
SELMODRAFT_413266 Selaginella moellendorffii SELMODRAFT_413266 I
SELMODRAFT_426759 Selaginella moellendorffii SELMODRAFT_426759 I
SELMODRAFT_443975 Selaginella moellendorffii SELMODRAFT_443975 I
SELMODRAFT_49296 Selaginella moellendorffii SELMODRAFT_49296 I
SELMODRAFT_49297 Selaginella moellendorffii SELMODRAFT_49297 I
SELMODRAFT_49312 Selaginella moellendorffii SELMODRAFT_49312 I
Si002403m.g Setaria italica Si002403m.g I
Solyc01g106940.2 Solanum lycopersicum Solyc01g106940.2 I
Solyc02g064630.2 Solanum lycopersicum Solyc02g064630.2 I
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I
TCM_000807 Theobroma cacao TCM_000807 I
TCM_007242 Theobroma cacao TCM_007242 I
TCM_029078 Theobroma cacao TCM_029078 I
Thhalv10004691m.g Eutrema salsugineum Thhalv10004691m.g I
Thhalv10008387m.g Eutrema salsugineum Thhalv10008387m.g I
Thhalv10010562m.g Eutrema salsugineum Thhalv10010562m.g I
Thhalv10011686m.g Eutrema salsugineum Thhalv10011686m.g I
TRAES3BF075800120CFD_g Triticum aestivum TRAES3BF075800120CFD_g I
TRAES3BF118300070CFD_g Triticum aestivum TRAES3BF118300070CFD_g I
Traes_3AL_12B53AB09 Triticum aestivum Traes_3AL_12B53AB09 I
Traes_3AL_CF481F6AC Triticum aestivum Traes_3AL_CF481F6AC I
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I
TRIUR3_08672 Triticum urartu TRIUR3_08672 I
TRIUR3_10613 Triticum urartu TRIUR3_10613 I
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I
TRB1 Vitis vinifera VIT_03s0091g01030 I
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I
VIT_11s0016g01890 Vitis vinifera VIT_11s0016g01890 I