CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0609s0180
(
Salix purpurea
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08536 (Whirly)
IPR013742
SapurV1A.0609s0180
T350648_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0609s0180.1.p
Whirly
128
263
IYKGKAALTVEPRSPEFSPLDSGAYKLVKEGFVLLQFAPAAAVRQYDWTRKQVFSLSVTEIGHLVSLGPKDSCEFFHDPNKGKSEEGKVRKLLKVEPLPDGSGHFFNLSVQNKVLNIDESIYIPVTKAEYTVLTSA
SapurV1A.0609s0180.2.p
Whirly
127
262
IYKGKAALTVEPRSPEFSPLDSGAYKLVKEGFVLLQFAPAAAVRQYDWTRKQVFSLSVTEIGHLVSLGPKDSCEFFHDPNKGKSEEGKVRKLLKVEPLPDGSGHFFNLSVQNKVLNIDESIYIPVTKAEYTVLTSA
Links
Other
Whirly
family TFs
Other
Salix purpurea
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29736.m002027
Ricinus communis
29736.m002027
N
0.831
AMTR_s00133p00020030
Amborella trichopoda
AMTR_s00133p00020030
N
0.743
Aquca_002_00510
Aquilegia coerulea
Aquca_002_00510
N
0.743
WHY1
Arabidopsis thaliana
AT1G14410
N
0.809
WHY3
Arabidopsis thaliana
AT2G02740
N
0.824
BGIOSGA022297
Oryza indica
BGIOSGA022297
N
0.750
Bo7g080560
Brassica oleracea
Bo7g080560
N
0.824
Bo8g066030
Brassica oleracea
Bo8g066030
N
0.838
Bostr.0556s0088
Boechera stricta
Bostr.0556s0088
N
0.824
Bra016702
Brassica rapa
Bra016702
N
0.838
Bra024809
Brassica rapa
Bra024809
N
0.838
BRADI1G51040
Brachypodium distachyon
BRADI1G51040
N
0.765
Cagra.0534s0030
Capsella grandiflora
Cagra.0534s0030
N
0.809
Cagra.3501s0060
Capsella grandiflora
Cagra.3501s0060
N
0.824
Carubv10010024m.g
Capsella rubella
Carubv10010024m.g
N
0.816
Carubv10017841m.g
Capsella rubella
Carubv10017841m.g
N
0.809
cassava35817.valid.m1
Manihot esculenta
cassava35817.valid.m1
N
0.853
Ca_24297
Cicer arietinum
Ca_24297
N
0.713
Ciclev10032427m.g
Citrus clementina
Ciclev10032427m.g
N
0.846
Cla022217
Citrullus lanatus
Cla022217
N
0.838
Cucsa.005520
Cucumis sativus
Cucsa.005520
N
0.801
Eucgr.G02539
Eucalyptus grandis
Eucgr.G02539
N
0.846
evm.TU.supercontig_1007.4
Carica papaya
evm.TU.supercontig_1007.4
N
0.860
ATWHY1
Arabidopsis lyrata
fgenesh2_kg.1__1569__AT1G14410.1
N
0.809
ATWHY3
Arabidopsis lyrata
fgenesh2_kg.5__172__AT2G02740.1
N
0.824
GLYMA08G40850
Glycine max
GLYMA08G40850
N
0.779
GLYMA18G16200
Glycine max
GLYMA18G16200
N
0.794
Gorai.013G077400
Gossypium raimondii
Gorai.013G077400
N
0.809
GRMZM2G155662
Zea mays
GRMZM2G155662
N
0.757
GSMUA_Achr10G21100_001
Musa acuminata
GSMUA_Achr10G21100_001
N
0.801
LPERR06G02670
Leersia perrieri
LPERR06G02670
N
0.750
Lus10036723.g
Linum usitatissimum
Lus10036723.g
N
0.831
MDP0000268451
Malus domestica
MDP0000268451
N
0.824
mgf002465m
Mimulus guttatus
mgf002465m
N
0.824
MLOC_11586
Hordeum vulgare
MLOC_11586
N
0.728
OBART06G03050
Oryza barthii
OBART06G03050
N
0.750
OMERI06G03280
Oryza meridionalis
OMERI06G03280
N
0.750
OMERI07G11550
Oryza meridionalis
OMERI07G11550
N
0.750
ONIVA06G03980
Oryza nivara
ONIVA06G03980
N
0.750
OPUNC06G02750
Oryza punctata
OPUNC06G02750
N
0.750
orange1.1g024467m.g
Citrus sinensis
orange1.1g024467m.g
N
0.846
ORGLA06G0029900
Oryza glaberrima
ORGLA06G0029900
N
0.750
ORUFI06G03010
Oryza rufipogon
ORUFI06G03010
N
0.750
OS06G0145800
Oryza sativa
OS06G0145800
N
0.750
Pavir.Da02402
Panicum virgatum
Pavir.Da02402
N
0.772
Pavir.Db02235
Panicum virgatum
Pavir.Db02235
N
0.765
PGSC0003DMG400017627
Solanum tuberosum
PGSC0003DMG400017627
N
0.838
PK22670.1
Cannabis sativa
PK22670.1
N
0.801
Pm006558
Prunus mume
Pm006558
N
0.801
POPTR_0008s14840
Populus trichocarpa
POPTR_0008s14840
N
0.956
POPTR_0010s10260
Populus trichocarpa
POPTR_0010s10260
N
0.897
PRUPE_ppa009776mg
Prunus persica
PRUPE_ppa009776mg
N
0.801
Sb10g003170
Sorghum bicolor
Sb10g003170
N
0.765
Si006951m.g
Setaria italica
Si006951m.g
N
0.772
Solyc05g007100.2
Solanum lycopersicum
Solyc05g007100.2
N
0.846
TCM_011795
Theobroma cacao
TCM_011795
N
0.816
Thhalv10004763m.g
Eutrema salsugineum
Thhalv10004763m.g
N
0.824
Traes_4AL_FE94301FD
Triticum aestivum
Traes_4AL_FE94301FD
N
0.735
VIT_01s0026g01720
Vitis vinifera
VIT_01s0026g01720
N
0.831