POPTR_0010s19100 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0010s19100 T004697_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.788 0.959
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.723 0.857
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.702 0.837
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.702 0.837
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.702 0.837
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.700 0.837
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.698 0.796
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.685 0.857
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.685 0.857
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.681 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0010s19100.1 AP2 78 129

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK07402.1 Cannabis sativa PK07402.1 D 0.788
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.723
Pm018989 Prunus mume Pm018989 I 0.747
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.780
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.735
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.759
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.747
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.698
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.728
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.772
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.712
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.814
29729.m002292 Ricinus communis 29729.m002292 I 0.800
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.743
Pm015262 Prunus mume Pm015262 I 0.745
Pm003634 Prunus mume Pm003634 I 0.728
Cla012194 Citrullus lanatus Cla012194 I 0.712
Cla006713 Citrullus lanatus Cla006713 I 0.771
Cla001755 Citrullus lanatus Cla001755 I 0.712
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.763
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.723
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.723
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.747
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.761
PK07829.1 Cannabis sativa PK07829.1 I 0.709
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.767
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.804
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.807
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.804
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.807
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.719
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.721
TCM_043306 Theobroma cacao TCM_043306 I 0.733
MDP0000446783 Malus domestica MDP0000446783 I 0.739
MDP0000290585 Malus domestica MDP0000290585 I 0.747
MDP0000165880 Malus domestica MDP0000165880 I 0.739
MDP0000153866 Malus domestica MDP0000153866 I 0.731
MDP0000147009 Malus domestica MDP0000147009 I 0.739
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.777
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.777
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.708
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.739
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.686
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.737
OBART01G04210 Oryza barthii OBART01G04210 I 0.737
OB01G13930 Oryza brachyantha OB01G13930 I 0.737
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.752
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.729
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.723
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.728
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.765
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.756
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.731
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.737
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.752
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.712
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.726
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.712
F775_05774 Aegilops tauschii F775_05774 I 0.723
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.731
Bra017011 Brassica rapa Bra017011 I 0.752
Bo9g177130 Brassica oleracea Bo9g177130 I 0.712
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.737
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.747
AT2G40350 Arabidopsis thaliana AT2G40350 I 0.696
TCM_043302 Theobroma cacao TCM_043302 I 0.733
TCM_043275 Theobroma cacao TCM_043275 I 0.749
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.743
Si002067m.g Setaria italica Si002067m.g I 0.729
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.718
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.724
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.712
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.745
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.723
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.803
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.743
DREB2A Oryza sativa OS01G0165000 I 0.737
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.737
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.737
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.737
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.737
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.737