Gorai.011G235900 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.011G235900 T008696_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.714 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G235900.1 AP2 71 122

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.000
Q84JE9_HORVU Hordeum vulgare Q84JE9_HORVU D 0.000
Q84ND8_HORVU Hordeum vulgare Q84ND8_HORVU D 0.000
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.000
PK07402.1 Cannabis sativa PK07402.1 D 0.714
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.677
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.000
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.000
Bo1g141310 Brassica oleracea Bo1g141310 I 0.000
Bo3g063910 Brassica oleracea Bo3g063910 I 0.000
Bra001386 Brassica rapa Bra001386 I 0.000
Bra034159 Brassica rapa Bra034159 I 0.000
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.688
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I 0.000
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.000
F775_01779 Aegilops tauschii F775_01779 I 0.000
F775_02345 Aegilops tauschii F775_02345 I 0.000
F775_05774 Aegilops tauschii F775_05774 I 0.000
F775_32062 Aegilops tauschii F775_32062 I 0.000
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.000
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.000
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.000
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.000
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.684
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.000
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.695
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.695
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.684
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.000
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.000
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.000
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.000
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.000
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.000
MLOC_77405 Hordeum vulgare MLOC_77405 I 0.000
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.000
OB01G13930 Oryza brachyantha OB01G13930 I 0.677
OB05G20700 Oryza brachyantha OB05G20700 I 0.000
OB08G30790 Oryza brachyantha OB08G30790 I 0.000
OBART01G04210 Oryza barthii OBART01G04210 I 0.677
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.677
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.000
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.677
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.677
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.000
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.677
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.000
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.677
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.000
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.677
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.000
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.677
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.000
DREB2A Oryza sativa OS01G0165000 I 0.677
DREB2C Oryza sativa OS08G0565200 I 0.000
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.698
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.708
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.691
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.000
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.000
Si022619m.g Setaria italica Si022619m.g I 0.000
Si024059m.g Setaria italica Si024059m.g I 0.000
TCM_026121 Theobroma cacao TCM_026121 I 0.000
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.000
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.000
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.000
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.000
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.000
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.000
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.000
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.000
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.000
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.700
Cla001755 Citrullus lanatus Cla001755 I 0.715
Cla006713 Citrullus lanatus Cla006713 I 0.708
Pm018989 Prunus mume Pm018989 I 0.691
29729.m002292 Ricinus communis 29729.m002292 I 0.719
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.707
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.715
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.709
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.000
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.000
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.000
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.679
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.708
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.730
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.696
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.000
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.736
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.736
MDP0000147009 Malus domestica MDP0000147009 I 0.691
MDP0000165880 Malus domestica MDP0000165880 I 0.704
MDP0000446783 Malus domestica MDP0000446783 I 0.691
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.679
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.000
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.000
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.000
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.000
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.692
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.693
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.706
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.693
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.706
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.681
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.705