HCOI01493400 (Haemonchus contortus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 HCOI01493400 T016558_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI01493400.t1 ARID/BRIGHT 84 166
HCOI01493400.t2 ARID/BRIGHT 84 166
HCOI01493400.t3 ARID/BRIGHT 84 166
HCOI01493400.t4 ARID/BRIGHT 84 144
HCOI01493400.t4 ARID/BRIGHT 141 189

Links

Other ARID/BRIGHT family TFs
Other Haemonchus contortus TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10002029.g Linum usitatissimum Lus10002029.g N
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N
Carubv10002492m.g Capsella rubella Carubv10002492m.g N
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N
Cucsa.310460 Cucumis sativus Cucsa.310460 N
Lus10002899.g Linum usitatissimum Lus10002899.g N
MDP0000119866 Malus domestica MDP0000119866 N
MDP0000202143 Malus domestica MDP0000202143 N
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N
SapurV1A.0043s0520 Salix purpurea SapurV1A.0043s0520 N
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N
PK00680.1 Cannabis sativa PK00680.1 N
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N
Bo9g171420 Brassica oleracea Bo9g171420 N
Bra008975 Brassica rapa Bra008975 N
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N
GLYMA04G07230 Glycine max GLYMA04G07230 N
GLYMA06G07330 Glycine max GLYMA06G07330 N
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N
OB06G27850 Oryza brachyantha OB06G27850 N
OCP3 Arabidopsis thaliana AT5G11270 N
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N
TCM_038389 Theobroma cacao TCM_038389 N
OCP3 Vitis vinifera VIT_04s0008g05190 N
Cla021272 Citrullus lanatus Cla021272 N
Pm004594 Prunus mume Pm004594 N
29848.m004652 Ricinus communis 29848.m004652 N
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N