Pavir.Ab00366 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.Ab00366 T023780_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.765 0.765
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab00366.1.p B3 71 173
Pavir.Ab00366.2.p B3 71 173
Pavir.Ab00366.3.p B3 71 173
Pavir.Ab00366.4.p B3 71 173

Links

Other B3 family TFs
Other Panicum virgatum TFs

472 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I
AAEL011425 Aedes aegypti AAEL011425 I
ACYPI006576 Acyrthosiphon pisum ACYPI006576 I
BGIBMGA005289 Bombyx mori BGIBMGA005289 I
CapteG172235 Capitella teleta CapteG172235 I
CBN25379 Caenorhabditis brenneri CBN25379 I
CPIJ020011 Culex quinquefasciatus CPIJ020011 I
HmgZ Drosophila melanogaster FBgn0010228 I
HmgZ Drosophila yakuba FBgn0068145 I
GA14726 Drosophila pseudoobscura FBgn0074753 I
GF11622 Drosophila ananassae FBgn0088662 I
GG20749 Drosophila erecta FBgn0112936 I
GH20784 Drosophila grimshawi FBgn0128247 I
GI20867 Drosophila mojavensis FBgn0143601 I
GL17523 Drosophila persimilis FBgn0155126 I
GM15692 Drosophila sechellia FBgn0170608 I
GD25171 Drosophila simulans FBgn0196483 I
GJ20604 Drosophila virilis FBgn0207743 I
GK15658 Drosophila willistoni FBgn0217663 I
KGM_13852 Danaus plexippus KGM_13852 I
MCINX001064 Melitaea cinxia MCINX001064 I
RPRC006380 Rhodnius prolixus RPRC006380 I
TriadG64155 Trichoplax adhaerens TriadG64155 I
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I
MDOA014797 Musca domestica MDOA014797 I
PPAI002522 Phlebotomus papatasi PPAI002522 I
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N
BGIBMGA005288 Bombyx mori BGIBMGA005288 N
Bm8632 Brugia malayi Bm8632 N
CBG04066 Caenorhabditis briggsae CBG04066 N
CBG09136 Caenorhabditis briggsae CBG09136 N
CJA04355 Caenorhabditis japonica CJA04355 N
CPIJ002953 Culex quinquefasciatus CPIJ002953 N
CRE03995 Caenorhabditis remanei CRE03995 N
CRE11852 Caenorhabditis remanei CRE11852 N
EHI_045480 Entamoeba histolytica EHI_045480 N
Ssrp Drosophila melanogaster FBgn0010278 N
Ssrp Drosophila pseudoobscura FBgn0078456 N
GF12460 Drosophila ananassae FBgn0089497 N
GG19998 Drosophila erecta FBgn0112197 N
GH21151 Drosophila grimshawi FBgn0128613 N
GI18750 Drosophila mojavensis FBgn0141489 N
GL11071 Drosophila persimilis FBgn0148681 N
GD25013 Drosophila simulans FBgn0196325 N
GJ21774 Drosophila virilis FBgn0208892 N
GK22092 Drosophila willistoni FBgn0224077 N
GE11532 Drosophila yakuba FBgn0229332 N
HMEL015307 Heliconius melpomene HMEL015307 N
KGM_13851 Danaus plexippus KGM_13851 N
LOAG_08062 Loa loa LOAG_08062 N
PCH_Pc16g09240 Penicillium rubens PCH_Pc16g09240 N
PDIP_20560 Penicillium digitatum PDIP_20560 N
PEX1_048030 Penicillium expansum PEX1_048030 N
PITC_020100 Penicillium italicum PITC_020100 N
PPA06513 Pristionchus pacificus PPA06513 N
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N
Smp_148930 Schistosoma mansoni Smp_148930 N
U727_00434111271 Penicillium solitum U727_00434111271 N
hmg-1.1 Caenorhabditis elegans WBGene00001971 N
hmg-3 Caenorhabditis elegans WBGene00001973 N
hmg-4 Caenorhabditis elegans WBGene00001974 N
WBGene00238628 Onchocerca volvulus WBGene00238628 N
YQE_02071 Dendroctonus ponderosae YQE_02071 N
EDI_049480 Entamoeba dispar EDI_049480 N
estExt_fgenesh3_pg.C_20344 Chlorella NC64A estExt_fgenesh3_pg.C_20344 N
estExt_Genewise1Plus.C_51175 Fragilariopsis cylindrus estExt_Genewise1Plus.C_51175 N
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N
LDEC020995 Leptinotarsa decemlineata LDEC020995 N
Sjc_0035580 Schistosoma japonicum Sjc_0035580 N
Minc01744 Meloidogyne incognita Minc01744 N
Minc03634 Meloidogyne incognita Minc03634 N
Minc04648 Meloidogyne incognita Minc04648 N
Minc10016 Meloidogyne incognita Minc10016 N
Pc16g09240 Penicillium chrysogenum Pc16g09240 N
MDOA007633 Musca domestica MDOA007633 N
PPAI002521 Phlebotomus papatasi PPAI002521 N
A_01848 Schistosoma haematobium A_01848 N
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N
ASU_05994 Ascaris suum ASU_05994 N
ASU_09087 Ascaris suum ASU_09087 N
csin108029 Clonorchis sinensis csin108029 N
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N
DME_0000779601 Dracunculus medinensis DME_0000779601 N
ECPE_0001309901 Echinostoma caproni ECPE_0001309901 N
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N
HCOI01420700 Haemonchus contortus HCOI01420700 N
HCOI01550200 Haemonchus contortus HCOI01550200 N
HCOI02106600 Haemonchus contortus HCOI02106600 N
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N
HmN_000028000 Hymenolepis microstoma HmN_000028000 N
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N
L596_g16476 Steinernema carpocapsae L596_g16476 N
L596_g28088 Steinernema carpocapsae L596_g28088 N
L889_g16198 Steinernema feltiae L889_g16198 N
L889_g29516 Steinernema feltiae L889_g29516 N
L889_g9094 Steinernema feltiae L889_g9094 N
L892_g19058 Steinernema scapterisci L892_g19058 N
L892_g23618 Steinernema scapterisci L892_g23618 N
L893_g23503 Steinernema glaseri L893_g23503 N
L893_g29974 Steinernema glaseri L893_g29974 N
L898_g4830 Steinernema monticolum L898_g4830 N
L898_g7743 Steinernema monticolum L898_g7743 N
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N
MhA1_Contig128.frz3.gene5 Meloidogyne hapla MhA1_Contig128.frz3.gene5 N
MhA1_Contig2971.frz3.fgene1 Meloidogyne hapla MhA1_Contig2971.frz3.fgene1 N
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N
NECAME_16525 Necator americanus NECAME_16525 N
NECAME_17555 Necator americanus NECAME_17555 N
NECAME_17981 Necator americanus NECAME_17981 N
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N
SCUD_0000070901 Schistosoma curassoni SCUD_0000070901 N
SMTD_0001155301 Schistosoma mattheei SMTD_0001155301 N
SMUV_0000499601 Syphacia muris SMUV_0000499601 N
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N
SSLN_0000125101 Schistocephalus solidus SSLN_0000125101 N
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N
T265_15460 Opisthorchis viverrini T265_15460 N
TASK_0000475801 Taenia asiatica TASK_0000475801 N
TCNE_0000332201 Toxocara canis TCNE_0000332201 N
TCNE_0001025901 Toxocara canis TCNE_0001025901 N
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N
TsM_000111500 Taenia solium TsM_000111500 N
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N