cassava8594.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava8594.m1 T048122_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK03576.1
M01119_2.00 		Cannabis sativa
NCACGTGCN
NGCACGTGN		 PBM
Lambert et al.(2019)
pTH10095 		0.842 0.729
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava8594.m1 bHLH 144 192

Links

Other bHLH family TFs
Other Manihot esculenta TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AtMYB70 Arabidopsis thaliana AT2G23290 D
MYB1 Arabidopsis thaliana AT3G09230 D
F3A4.140 Arabidopsis thaliana AT3G50060 D
MYB73 Arabidopsis thaliana AT4G37260 D
MYB44 Arabidopsis thaliana AT5G67300 D
OS02G0187700 Oryza sativa OS02G0187700 D
PK28565.1 Cannabis sativa PK28565.1 D
AMTR_s00006p00225600 Amborella trichopoda AMTR_s00006p00225600 I
BGIOSGA030245 Oryza indica BGIOSGA030245 I
Bo1g004900 Brassica oleracea Bo1g004900 I
Bo2g167960 Brassica oleracea Bo2g167960 I
Bo3g153550 Brassica oleracea Bo3g153550 I
Bo4g151410 Brassica oleracea Bo4g151410 I
Bo7g063830 Brassica oleracea Bo7g063830 I
Bo7g099180 Brassica oleracea Bo7g099180 I
Bo7g118450 Brassica oleracea Bo7g118450 I
Bo8g079430 Brassica oleracea Bo8g079430 I
Bo8g090160 Brassica oleracea Bo8g090160 I
Bra007186 Brassica rapa Bra007186 I
Bra010593 Brassica rapa Bra010593 I
Bra011749 Brassica rapa Bra011749 I
Bra012149 Brassica rapa Bra012149 I
Bra012910 Brassica rapa Bra012910 I
Bra017813 Brassica rapa Bra017813 I
Bra032176 Brassica rapa Bra032176 I
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I
MYB77 Arabidopsis lyrata fgenesh2_kg.5__1356__AT3G50060.1 I
GLYMA01G39740 Glycine max GLYMA01G39740 I
GLYMA04G03910 Glycine max GLYMA04G03910 I
GLYMA04G04490 Glycine max GLYMA04G04490 I
GLYMA05G21220 Glycine max GLYMA05G21220 I
GLYMA06G04010 Glycine max GLYMA06G04010 I
GLYMA11G05550 Glycine max GLYMA11G05550 I
GLYMA14G09540 Glycine max GLYMA14G09540 I
GLYMA17G35620 Glycine max GLYMA17G35620 I
GLYMA17G36370 Glycine max GLYMA17G36370 I
GRMZM2G050550 Zea mays GRMZM2G050550 I
GRMZM2G087955 Zea mays GRMZM2G087955 I
GRMZM2G145444 Zea mays GRMZM2G145444 I
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I
GSMUA_Achr8G25220_001 Musa acuminata GSMUA_Achr8G25220_001 I
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I
LPERR02G05810 Leersia perrieri LPERR02G05810 I
LPERR09G00910 Leersia perrieri LPERR09G00910 I
MLOC_64817 Hordeum vulgare MLOC_64817 I
MLOC_7426 Hordeum vulgare MLOC_7426 I
MTR_3g101290 Medicago truncatula MTR_3g101290 I
MTR_4g094982 Medicago truncatula MTR_4g094982 I
MTR_5g016510 Medicago truncatula MTR_5g016510 I
OB09G10200 Oryza brachyantha OB09G10200 I
OBART09G00310 Oryza barthii OBART09G00310 I
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I
OMERI02G07700 Oryza meridionalis OMERI02G07700 I
OMERI08G05160 Oryza meridionalis OMERI08G05160 I
ONIVA02G08210 Oryza nivara ONIVA02G08210 I
ONIVA09G00250 Oryza nivara ONIVA09G00250 I
OPUNC02G05820 Oryza punctata OPUNC02G05820 I
OPUNC12G06260 Oryza punctata OPUNC12G06260 I
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I
OS09G0106700 Oryza sativa OS09G0106700 I
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I
POPTR_0002s13030 Populus trichocarpa POPTR_0002s13030 I
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I
PRUPE_ppa017892mg Prunus persica PRUPE_ppa017892mg I
Sb02g013010 Sorghum bicolor Sb02g013010 I
Sb04g005940 Sorghum bicolor Sb04g005940 I
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I
Si017917m.g Setaria italica Si017917m.g I
Si032789m.g Setaria italica Si032789m.g I
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I
TCM_000696 Theobroma cacao TCM_000696 I
TCM_007138 Theobroma cacao TCM_007138 I
TCM_033907 Theobroma cacao TCM_033907 I
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I
VIT_07s0129g01050 Vitis vinifera VIT_07s0129g01050 I
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I
Ca_01522 Cicer arietinum Ca_01522 I
Ca_02182 Cicer arietinum Ca_02182 I
Cla006872 Citrullus lanatus Cla006872 I
Cla014191 Citrullus lanatus Cla014191 I
Cla020946 Citrullus lanatus Cla020946 I
Cla021015 Citrullus lanatus Cla021015 I
Cla022889 Citrullus lanatus Cla022889 I
Pm005220 Prunus mume Pm005220 I
Pm005332 Prunus mume Pm005332 I
Pm018951 Prunus mume Pm018951 I
29801.m003096 Ricinus communis 29801.m003096 I
29970.m000987 Ricinus communis 29970.m000987 I
30170.m013698 Ricinus communis 30170.m013698 I
30170.m013927 Ricinus communis 30170.m013927 I
cassava16103.m1 Manihot esculenta cassava16103.m1 I
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I
cassava41257.m1 Manihot esculenta cassava41257.m1 I
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I
cassava46434.m1 Manihot esculenta cassava46434.m1 I
cassava47374.m1 Manihot esculenta cassava47374.m1 I
Cucsa.073130 Cucumis sativus Cucsa.073130 I
Cucsa.102710 Cucumis sativus Cucsa.102710 I
Cucsa.123440 Cucumis sativus Cucsa.123440 I
Cucsa.232630 Cucumis sativus Cucsa.232630 I
Cucsa.352560 Cucumis sativus Cucsa.352560 I
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I
mgf003084m Mimulus guttatus mgf003084m I
mgf006151m Mimulus guttatus mgf006151m I
mgf014089m Mimulus guttatus mgf014089m I
mgf023922m Mimulus guttatus mgf023922m I
mgf025567m Mimulus guttatus mgf025567m I
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I
Bostr.20505s0177 Boechera stricta Bostr.20505s0177 I
Bostr.22252s0145 Boechera stricta Bostr.22252s0145 I
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I
Bostr.6864s0236 Boechera stricta Bostr.6864s0236 I
Bostr.7867s1585 Boechera stricta Bostr.7867s1585 I
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I
Cagra.1232s0025 Capsella grandiflora Cagra.1232s0025 I
Cagra.1549s0005 Capsella grandiflora Cagra.1549s0005 I
Carubv10007638m.g Capsella rubella Carubv10007638m.g I
Carubv10019440m.g Capsella rubella Carubv10019440m.g I
Carubv10023692m.g Capsella rubella Carubv10023692m.g I
Carubv10027659m.g Capsella rubella Carubv10027659m.g I
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I
Eucgr.F00031 Eucalyptus grandis Eucgr.F00031 I
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I
Eucgr.J00189 Eucalyptus grandis Eucgr.J00189 I
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I
Gorai.009G275100 Gossypium raimondii Gorai.009G275100 I
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I
Lus10010260.g Linum usitatissimum Lus10010260.g I
Lus10021762.g Linum usitatissimum Lus10021762.g I
Lus10030336.g Linum usitatissimum Lus10030336.g I
Lus10032764.g Linum usitatissimum Lus10032764.g I
MDP0000196986 Malus domestica MDP0000196986 I
MDP0000232454 Malus domestica MDP0000232454 I
MDP0000275800 Malus domestica MDP0000275800 I
MDP0000463846 Malus domestica MDP0000463846 I
MDP0000477900 Malus domestica MDP0000477900 I
MDP0000480596 Malus domestica MDP0000480596 I
MDP0000641708 Malus domestica MDP0000641708 I
MDP0000784297 Malus domestica MDP0000784297 I
MDP0000894463 Malus domestica MDP0000894463 I
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I
Pavir.J23512 Panicum virgatum Pavir.J23512 I
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I
SapurV1A.0339s0020 Salix purpurea SapurV1A.0339s0020 I
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I
SapurV1A.0708s0130 Salix purpurea SapurV1A.0708s0130 I
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I
Thhalv10010431m.g Eutrema salsugineum Thhalv10010431m.g I
Thhalv10010581m.g Eutrema salsugineum Thhalv10010581m.g I
Thhalv10016794m.g Eutrema salsugineum Thhalv10016794m.g I
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I
PK17282.1 Cannabis sativa PK17282.1 I
PK29071.1 Cannabis sativa PK29071.1 I
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I
chr5.CM0096.100.nc Lotus japonicus chr5.CM0096.100.nc I
CM0528.210.nd Lotus japonicus CM0528.210.nd I
GLYMA09G12164 Glycine max GLYMA09G12164 N