CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACYPI32234
(
Acyrthosiphon pisum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ACYPI32234
T056632_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Atf3
M03648_2.00
Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN
SELEX
Nitta et al.(2015)
Atf3_1
0.890
0.672
Jdp2
M00125_2.00
Mus musculus
NRTGAYDNNN
NNNHRTCAYN
PBM
Badis et al.(2009)
Jundm2_0911
0.805
0.547
Jdp2
M01810_2.00
Mus musculus
NNTGACGYMW
WKRCGTCANN
PBM
Weirauch et al.(2014)
pTH5464
0.805
0.547
JDP2
M02836_2.00
Homo sapiens
ATGASTCAT
ATGASTCAT
SELEX
Jolma et al.(2013)
JDP2_1
0.805
0.547
JDP2
M02837_2.00
Homo sapiens
NRTGACGTCATB
VATGACGTCAYN
SELEX
Jolma et al.(2013)
JDP2_2
0.805
0.547
JDP2
M02838_2.00
Homo sapiens
ATGASTCAT
ATGASTCAT
SELEX
Jolma et al.(2013)
JDP2_3
0.805
0.547
JDP2
M02839_2.00
Homo sapiens
NRTGACGTCATN
NATGACGTCAYN
SELEX
Jolma et al.(2013)
JDP2_4
0.805
0.547
Jdp2
M02861_2.00
Mus musculus
ATGASTCAT
ATGASTCAT
SELEX
Jolma et al.(2013)
Jdp2_1
0.805
0.547
Jdp2
M02862_2.00
Mus musculus
VATGACGTCAYN
NRTGACGTCATB
SELEX
Jolma et al.(2013)
Jdp2_2
0.805
0.547
JDP2
M04285_2.00
Homo sapiens
NATGASTCATV
BATGASTCATN
SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1
0.805
0.547
JDP2
M04286_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2
0.805
0.547
JDP2
M04289_2.00
Homo sapiens
NRTGMSKCAYN
NRTGMSKCAYN
SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1
0.805
0.547
JDP2
M04290_2.00
Homo sapiens
NRTKACRTMAYN
NRTKAYGTMAYN
SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2
0.805
0.547
Jdp2
M10033_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$JDP2_03
0.805
0.547
JDP2
M04287_2.00
Homo sapiens
BATGASTCAYN
NRTGASTCATV
SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1
0.805
0.547
JDP2
M04288_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2
0.805
0.547
JDP2
M04291_2.00
Homo sapiens
NRTGASTCAYN
NRTGASTCAYN
SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1
0.805
0.547
JDP2
M04292_2.00
Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN
SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2
0.805
0.547
Atf3
M00758_2.00
Mus musculus
NNRTKAYNN
NNRTMAYNN
PBM
Weirauch et al.(2013)
pTH2684
0.787
0.562
Atf3
M01807_2.00
Mus musculus
GATGACGY
RCGTCATC
PBM
Weirauch et al.(2014)
pTH5018
0.787
0.562
Atf3
M08825_2.00
Mus musculus
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A
0.787
0.562
Fosl2
M01809_2.00
Mus musculus
GATGACKH
DMGTCATC
PBM
Weirauch et al.(2014)
pTH5108
0.783
0.453
Fosl2
M08828_2.00
Mus musculus
NVTGACTCABN
NVTGAGTCABN
Misc
Kulakovskiy et al.(2013)
FOSL2_MOUSE.H11MO.0.A
0.783
0.453
Fosl2
M09494_2.00
Mus musculus
NNVTGASTCABN
NVTGASTCABNN
Misc
Heinz et al.(2010)
3T3L1-Fosl2_GSE56872
0.783
0.453
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACYPI32234-PA
bZIP
194
257
EDEERRRRRRERNKIAATKCRLKKREKTTNLMQESNVLETKNYDLKSQIQELETQRNELMKMLS
Links
Other
bZIP
family TFs
Other
Acyrthosiphon pisum
TFs
261 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LIN28B
Homo sapiens
ENSG00000187772
D
ENSACAG00000017764
Anolis carolinensis
ENSACAG00000017764
I
ENSAMEG00000010582
Ailuropoda melanoleuca
ENSAMEG00000010582
I
ENSAMEG00000011453
Ailuropoda melanoleuca
ENSAMEG00000011453
I
ENSAMXG00000001433
Astyanax mexicanus
ENSAMXG00000001433
I
ENSAMXG00000001573
Astyanax mexicanus
ENSAMXG00000001573
I
ENSAMXG00000001888
Astyanax mexicanus
ENSAMXG00000001888
I
ENSAMXG00000016813
Astyanax mexicanus
ENSAMXG00000016813
I
ENSAPLG00000014264
Anas platyrhynchos
ENSAPLG00000014264
I
ENSBTAG00000040497
Bos taurus
ENSBTAG00000040497
I
LIN28B
Bos taurus
ENSBTAG00000043973
I
ENSBTAG00000048256
Bos taurus
ENSBTAG00000048256
I
LIN28B
Canis familiaris
ENSCAFG00000003598
I
LIN28A
Canis familiaris
ENSCAFG00000012488
I
LIN28B
Choloepus hoffmanni
ENSCHOG00000001682
I
LIN28A
Choloepus hoffmanni
ENSCHOG00000002073
I
LIN28B
Callithrix jacchus
ENSCJAG00000001671
I
LIN28A
Callithrix jacchus
ENSCJAG00000009796
I
ENSCJAG00000016916
Callithrix jacchus
ENSCJAG00000016916
I
ENSCJAG00000021979
Callithrix jacchus
ENSCJAG00000021979
I
ENSCJAG00000022770
Callithrix jacchus
ENSCJAG00000022770
I
LIN28B
Cavia porcellus
ENSCPOG00000006178
I
ENSCPOG00000024027
Cavia porcellus
ENSCPOG00000024027
I
ENSCSAG00000000975
Chlorocebus sabaeus
ENSCSAG00000000975
I
ENSCSAG00000014708
Chlorocebus sabaeus
ENSCSAG00000014708
I
LIN28A
Danio rerio
ENSDARG00000004328
I
lin28a
Danio rerio
ENSDARG00000016999
I
lin28b
Danio rerio
ENSDARG00000052511
I
LIN28A
Dasypus novemcinctus
ENSDNOG00000010710
I
LIN28B
Dasypus novemcinctus
ENSDNOG00000015300
I
LIN28A
Equus caballus
ENSECAG00000020267
I
LIN28B
Equus caballus
ENSECAG00000020994
I
LIN28B
Erinaceus europaeus
ENSEEUG00000003632
I
LIN28A
Erinaceus europaeus
ENSEEUG00000012085
I
LIN28B
Echinops telfairi
ENSETEG00000015340
I
ENSFALG00000000374
Ficedula albicollis
ENSFALG00000000374
I
ENSFALG00000011574
Ficedula albicollis
ENSFALG00000011574
I
LIN28B
Felis catus
ENSFCAG00000005058
I
LIN28A
Felis catus
ENSFCAG00000012810
I
LIN28A
Homo sapiens
ENSG00000131914
I
lin28a
Gasterosteus aculeatus
ENSGACG00000007826
I
LIN28B
Gasterosteus aculeatus
ENSGACG00000009428
I
si:ch1073-284b18.2
Gasterosteus aculeatus
ENSGACG00000013893
I
ENSGALG00000000388
Gallus gallus
ENSGALG00000000388
I
LIN28B
Gallus gallus
ENSGALG00000026761
I
LIN28B
Gorilla gorilla
ENSGGOG00000015437
I
LIN28A
Gorilla gorilla
ENSGGOG00000024918
I
ENSGMOG00000010704
Gadus morhua
ENSGMOG00000010704
I
ENSGMOG00000015523
Gadus morhua
ENSGMOG00000015523
I
ENSGMOG00000015660
Gadus morhua
ENSGMOG00000015660
I
ENSLACG00000002747
Latimeria chalumnae
ENSLACG00000002747
I
ENSLACG00000004053
Latimeria chalumnae
ENSLACG00000004053
I
LIN28A
Loxodonta africana
ENSLAFG00000017525
I
LIN28B
Loxodonta africana
ENSLAFG00000017788
I
ENSLOCG00000003353
Lepisosteus oculatus
ENSLOCG00000003353
I
ENSLOCG00000016539
Lepisosteus oculatus
ENSLOCG00000016539
I
ENSMEUG00000008743
Macropus eugenii
ENSMEUG00000008743
I
LIN28A
Meleagris gallopavo
ENSMGAG00000009456
I
LIN28B
Meleagris gallopavo
ENSMGAG00000013531
I
ENSMICG00000002297
Microcebus murinus
ENSMICG00000002297
I
LIN28A
Myotis lucifugus
ENSMLUG00000004699
I
LIN28B
Myotis lucifugus
ENSMLUG00000006883
I
ENSMLUG00000010158
Myotis lucifugus
ENSMLUG00000010158
I
LIN28B
Macaca mulatta
ENSMMUG00000014470
I
ENSMMUG00000032211
Macaca mulatta
ENSMMUG00000032211
I
LIN28A
Monodelphis domestica
ENSMODG00000014236
I
LIN28B
Monodelphis domestica
ENSMODG00000018035
I
ENSMPUG00000009489
Mustela putorius furo
ENSMPUG00000009489
I
ENSMPUG00000015724
Mustela putorius furo
ENSMPUG00000015724
I
Lin28a
Mus musculus
ENSMUSG00000050966
I
Lin28b
Mus musculus
ENSMUSG00000063804
I
ENSNLEG00000009294
Nomascus leucogenys
ENSNLEG00000009294
I
ENSNLEG00000014146
Nomascus leucogenys
ENSNLEG00000014146
I
LIN28B
Ornithorhynchus anatinus
ENSOANG00000010299
I
ENSOARG00000003913
Ovis aries
ENSOARG00000003913
I
ENSOARG00000004614
Ovis aries
ENSOARG00000004614
I
ENSOARG00000011404
Ovis aries
ENSOARG00000011404
I
ENSOCUG00000000299
Oryctolagus cuniculus
ENSOCUG00000000299
I
ENSOCUG00000011640
Oryctolagus cuniculus
ENSOCUG00000011640
I
LIN28B
Oryctolagus cuniculus
ENSOCUG00000017850
I
ENSOCUG00000027473
Oryctolagus cuniculus
ENSOCUG00000027473
I
ENSOCUG00000027786
Oryctolagus cuniculus
ENSOCUG00000027786
I
LIN28A
Otolemur garnettii
ENSOGAG00000003971
I
LIN28B
Otolemur garnettii
ENSOGAG00000011042
I
ENSONIG00000014706
Oreochromis niloticus
ENSONIG00000014706
I
ENSONIG00000016204
Oreochromis niloticus
ENSONIG00000016204
I
LIN28A
Ochotona princeps
ENSOPRG00000001591
I
LIN28B
Ochotona princeps
ENSOPRG00000006333
I
LIN28B
Oryzias latipes
ENSORLG00000012891
I
si:ch1073-284b18.2
Oryzias latipes
ENSORLG00000014369
I
ENSPANG00000005196
Papio anubis
ENSPANG00000005196
I
ENSPANG00000009841
Papio anubis
ENSPANG00000009841
I
ENSPFOG00000014054
Poecilia formosa
ENSPFOG00000014054
I
ENSPFOG00000019352
Poecilia formosa
ENSPFOG00000019352
I
ENSPPYG00000001684
Pongo abelii
ENSPPYG00000001684
I
ENSPPYG00000016875
Pongo abelii
ENSPPYG00000016875
I
ENSPSIG00000002635
Pelodiscus sinensis
ENSPSIG00000002635
I
LIN28A
Pan troglodytes
ENSPTRG00000000384
I
LIN28B
Pan troglodytes
ENSPTRG00000018453
I
LIN28B
Pteropus vampyrus
ENSPVAG00000008797
I
LIN28A
Pteropus vampyrus
ENSPVAG00000017267
I
Lin28b
Rattus norvegicus
ENSRNOG00000025938
I
Lin28a
Rattus norvegicus
ENSRNOG00000060320
I
LIN28B
Sorex araneus
ENSSARG00000008374
I
ENSSHAG00000012434
Sarcophilus harrisii
ENSSHAG00000012434
I
ENSSHAG00000012716
Sarcophilus harrisii
ENSSHAG00000012716
I
LIN28A
Sus scrofa
ENSSSCG00000003557
I
ENSSSCG00000004365
Sus scrofa
ENSSSCG00000004365
I
ENSSTOG00000002692
Ictidomys tridecemlineatus
ENSSTOG00000002692
I
ENSSTOG00000004329
Ictidomys tridecemlineatus
ENSSTOG00000004329
I
ENSTGUG00000001037
Taeniopygia guttata
ENSTGUG00000001037
I
LIN28B
Taeniopygia guttata
ENSTGUG00000012225
I
lin28a
Tetraodon nigroviridis
ENSTNIG00000009802
I
LIN28B
Tetraodon nigroviridis
ENSTNIG00000012302
I
si:ch1073-284b18.2
Takifugu rubripes
ENSTRUG00000006069
I
LIN28B
Takifugu rubripes
ENSTRUG00000008428
I
lin28a
Takifugu rubripes
ENSTRUG00000009454
I
ENSTSYG00000006480
Tarsius syrichta
ENSTSYG00000006480
I
ENSTSYG00000011513
Tarsius syrichta
ENSTSYG00000011513
I
LIN28A
Tursiops truncatus
ENSTTRG00000005678
I
LIN28B
Tursiops truncatus
ENSTTRG00000014919
I
ENSVPAG00000008073
Vicugna pacos
ENSVPAG00000008073
I
ENSXMAG00000003450
Xiphophorus maculatus
ENSXMAG00000003450
I
ENSXMAG00000014593
Xiphophorus maculatus
ENSXMAG00000014593
I
Aan_R002277
Calypte anna
Aan_R002277
I
Aan_R005866
Calypte anna
Aan_R005866
I
Aan_R007025
Calypte anna
Aan_R007025
I
Afo_R003680
Aptenodytes forsteri
Afo_R003680
I
Afo_R008930
Aptenodytes forsteri
Afo_R008930
I
Alligator_sinensis_CCG010967.1
Alligator sinensis
Alligator_sinensis_CCG010967.1
I
Brh_R006709
Buceros rhinoceros
Brh_R006709
I
Cmyd_10006225
Chelonia mydas
Cmyd_10006225
I
Cmyd_10009744
Chelonia mydas
Cmyd_10009744
I
Cmyd_10021069
Chelonia mydas
Cmyd_10021069
I
ENSBTAP00000004196-D2
Bos grunniens
ENSBTAP00000004196-D2
I
ENSBTAP00000053651-D1
Bos grunniens
ENSBTAP00000053651-D1
I
ENSMMUP00000018998
Macaca fascicularis
ENSMMUP00000018998
I
ENSP00000254231
Macaca fascicularis
ENSP00000254231
I
Gfo_R011576
Geospiza fortis
Gfo_R011576
I
Gfo_R012200
Geospiza fortis
Gfo_R012200
I
Myotis_brandtii_Lin28a_10029661
Myotis brandtii
Myotis_brandtii_Lin28a_10029661
I
Myotis_brandtii_LIN28B_10034705
Myotis brandtii
Myotis_brandtii_LIN28B_10034705
I
Ogr09706
Ophisaurus gracilis
Ogr09706
I
Ogr14286
Ophisaurus gracilis
Ogr14286
I
Pvit_09294
Pogona vitticeps
Pvit_09294
I
Pvit_17184
Pogona vitticeps
Pvit_17184
I
yakA12818
Bos grunniens
yakA12818
I
yakG040859
Bos grunniens
yakG040859
I
lin28b
Xenopus tropicalis
XB-GENE-1218969
I
lin28b.S
Xenopus laevis
XB-GENE-1218973
I
lin28a
Xenopus tropicalis
XB-GENE-491384
I
lin28a.S
Xenopus laevis
XB-GENE-866059
I