CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nfe2l3
(
Gasterosteus aculeatus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSGACG00000007066
T059785_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NFE2L1
M04008_2.00
Homo sapiens
RTGACTCAY
RTGAGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
NFE2L1.1
0.845
0.540
NFE2L1
M08782_2.00
Homo sapiens
NATGAYD
HRTCATN
Misc
Kulakovskiy et al.(2013)
NF2L1_HUMAN.H11MO.0.C
0.845
0.540
Nfe2l1
M08831_2.00
Mus musculus
NATGAYD
HRTCATN
Misc
Kulakovskiy et al.(2013)
NF2L1_MOUSE.H11MO.0.C
0.845
0.540
NFE2L1
M09925_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFE2L1_Q5
0.845
0.540
NFE2L1
M09926_2.00
Homo sapiens
NNNNHWNNATGAC
GTCATNNWDNNNN
Transfac
Matys et al.(2006)
V$TCF11_01
0.845
0.540
Nfe2
M08843_2.00
Mus musculus
RTGACTCAGCANDW
WHNTGCTGAGTCAY
Misc
Kulakovskiy et al.(2013)
NFE2_MOUSE.H11MO.0.A
0.819
0.540
NFE2
M02832_2.00
Homo sapiens
VATGACTCATB
VATGAGTCATB
SELEX
Jolma et al.(2013)
NFE2_1
0.815
0.540
NFE2
M04266_2.00
Homo sapiens
VRTGASTCAYB
VRTGASTCAYB
SELEX
Yin et al.(2017)
NFE2_eDBD_HT-SELEX
0.815
0.540
NFE2
M04024_2.00
Homo sapiens
RTGACTCAY
RTGAGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
NFE2.1
0.815
0.540
NFE2
M07813_2.00
Homo sapiens
VRTGACTCAGCANWWHB
VDWWNTGCTGAGTCAYB
ChIP-seq
Gerstein et al.(2012)
K562_NFE2_Stanford
0.815
0.540
NFE2
M08793_2.00
Homo sapiens
VVRTGACTCAGCA
TGCTGAGTCAYBB
Misc
Kulakovskiy et al.(2013)
NFE2_HUMAN.H11MO.0.A
0.815
0.540
NFE2
M09486_2.00
Homo sapiens
VATGACTCAGCA
TGCTGAGTCATB
Misc
Heinz et al.(2010)
K562-NFE2_GSE31477
0.815
0.540
NFE2
M09959_2.00
Homo sapiens
RTGASTCAGCD
HGCTGASTCAY
Transfac
Matys et al.(2006)
V$NFE2_01
0.815
0.540
NFE2
M09960_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFE2_04
0.815
0.540
NFE2
M09961_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFE2_Q6
0.815
0.540
NFE2
M04267_2.00
Homo sapiens
NRTGASTCAYN
NRTGASTCAYN
SELEX
Yin et al.(2017)
NFE2_eDBD_Methyl-HT-SELEX
0.815
0.540
NFE2L3
M09923_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF3_02
0.815
0.508
Nfe2l3
M10031_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF3_01
0.815
0.492
NFE2L2
M01142_2.00
Gallus gallus
NNRTKAYNN
NNRTMAYNN
PBM
Lambert et al.(2019)
pTH9845
0.807
0.508
NFE2L2
M08789_2.00
Homo sapiens
RTGACTCAGCANWW
WWNTGCTGAGTCAY
Misc
Kulakovskiy et al.(2013)
NF2L2_HUMAN.H11MO.0.A
0.807
0.492
NFE2L2
M09943_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF2_Q3
0.807
0.492
NFE2L2
M09944_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF2_Q4_01
0.807
0.492
NFE2L2
M09945_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF2_Q4
0.807
0.492
NFE2L2
M09946_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF2_Q6
0.807
0.492
FBgn0262975
M03654_2.00
Drosophila melanogaster
NYGTCAYSRTGACRN
NYGTCAYSRTGACRN
SELEX
Nitta et al.(2015)
cnc_1
0.798
0.429
FBgn0262975
M03655_2.00
Drosophila melanogaster
SATGACRNVVATGACD
HGTCATBBNYGTCATS
SELEX
Nitta et al.(2015)
cnc_2
0.798
0.429
FBgn0262975
M03656_2.00
Drosophila melanogaster
GTCAKSATGACGTCAY
RTGACGTCATSMTGAC
SELEX
Nitta et al.(2015)
cnc_3
0.798
0.429
FBgn0262975
M08189_2.00
Drosophila melanogaster
TGAYTBDGCA
TGCHVARTCA
ChIP-seq
Contrino et al.(2012)
Mf3
0.798
0.429
Nfe2l2
M08077_2.00
Mus musculus
NRNNRTGACTCAGCA
TGCTGAGTCAYNNYN
ChIP-seq
Mathelier et al.(2014)
MA0150.2
0.794
0.460
Nfe2l2
M08816_2.00
Mus musculus
RTGACTNAGCANDH
DHNTGCTNAGTCAY
Misc
Kulakovskiy et al.(2013)
NF2L2_MOUSE.H11MO.0.A
0.794
0.460
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000009355
bZIP
518
580
TLLRDIRRRGKNKLAAQNCRKRKLDAITGLQEEVERLQAQRGRLLKEKQLTAKTMGAVGQQIK
Links
Other
bZIP
family TFs
Other
Gasterosteus aculeatus
TFs
308 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.004G274200
Gossypium raimondii
Gorai.004G274200
N
Cucsa.310460
Cucumis sativus
Cucsa.310460
N
Aquca_001_00810
Aquilegia coerulea
Aquca_001_00810
N
Bostr.23997s0022
Boechera stricta
Bostr.23997s0022
N
Cagra.7526s0026
Capsella grandiflora
Cagra.7526s0026
N
Carubv10002492m.g
Capsella rubella
Carubv10002492m.g
N
Ciclev10010768m.g
Citrus clementina
Ciclev10010768m.g
N
evm.TU.supercontig_115.10
Carica papaya
evm.TU.supercontig_115.10
N
gene11668-v1.0-hybrid
Fragaria vesca
gene11668-v1.0-hybrid
N
cassava18449.valid.m1
Manihot esculenta
cassava18449.valid.m1
N
Lus10002029.g
Linum usitatissimum
Lus10002029.g
N
MDP0000119866
Malus domestica
MDP0000119866
N
MDP0000202143
Malus domestica
MDP0000202143
N
orange1.1g040593m.g
Citrus sinensis
orange1.1g040593m.g
N
Thhalv10013990m.g
Eutrema salsugineum
Thhalv10013990m.g
N
PK00680.1
Cannabis sativa
PK00680.1
N
chr1.CM0442.170.nd
Lotus japonicus
chr1.CM0442.170.nd
N
PRUPE_ppa007560mg
Prunus persica
PRUPE_ppa007560mg
N
Bo9g171420
Brassica oleracea
Bo9g171420
N
Bra008975
Brassica rapa
Bra008975
N
BRADI1G36770
Brachypodium distachyon
BRADI1G36770
N
OCP3
Arabidopsis lyrata
fgenesh2_kg.6__1093__AT5G11270.1
N
GLYMA04G07230
Glycine max
GLYMA04G07230
N
GLYMA06G07330
Glycine max
GLYMA06G07330
N
OB06G27850
Oryza brachyantha
OB06G27850
N
PGSC0003DMG400020785
Solanum tuberosum
PGSC0003DMG400020785
N
OCP3
Arabidopsis thaliana
AT5G11270
N
Solyc08g061140.2
Solanum lycopersicum
Solyc08g061140.2
N
TCM_038389
Theobroma cacao
TCM_038389
N
OCP3
Vitis vinifera
VIT_04s0008g05190
N
Ca_01772
Cicer arietinum
Ca_01772
N
Cla021272
Citrullus lanatus
Cla021272
N
Pm004594
Prunus mume
Pm004594
N
29848.m004652
Ricinus communis
29848.m004652
N