Ca_18364 (Cicer arietinum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ca_18364 T133716_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.822 0.913
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.803 0.891
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.799 0.717
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.799 0.696
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.796 0.848
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.796 0.848
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.796 0.848
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.787 0.804
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.787 0.804
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.776 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_18364 C2H2 ZF 83 105
Ca_18364 C2H2 ZF 138 160

Links

Other C2H2 ZF family TFs
Other Cicer arietinum TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N
TCM_011795 Theobroma cacao TCM_011795 N
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N
Ca_24297 Cicer arietinum Ca_24297 N
Cla022217 Citrullus lanatus Cla022217 N
Pm006558 Prunus mume Pm006558 N
29736.m002027 Ricinus communis 29736.m002027 N
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N
Cucsa.005520 Cucumis sativus Cucsa.005520 N
mgf002465m Mimulus guttatus mgf002465m N
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N
Carubv10010024m.g Capsella rubella Carubv10010024m.g N
Carubv10017841m.g Capsella rubella Carubv10017841m.g N
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N
Lus10036723.g Linum usitatissimum Lus10036723.g N
MDP0000268451 Malus domestica MDP0000268451 N
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N
PK22670.1 Cannabis sativa PK22670.1 N
LPERR06G02670 Leersia perrieri LPERR06G02670 N
WHY1 Arabidopsis thaliana AT1G14410 N
WHY3 Arabidopsis thaliana AT2G02740 N
BGIOSGA022297 Oryza indica BGIOSGA022297 N
Bo7g080560 Brassica oleracea Bo7g080560 N
Bo8g066030 Brassica oleracea Bo8g066030 N
Bra016702 Brassica rapa Bra016702 N
Bra024809 Brassica rapa Bra024809 N
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N
GLYMA08G40850 Glycine max GLYMA08G40850 N
GLYMA18G16200 Glycine max GLYMA18G16200 N
GRMZM2G155662 Zea mays GRMZM2G155662 N
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N
MLOC_11586 Hordeum vulgare MLOC_11586 N
OBART06G03050 Oryza barthii OBART06G03050 N
OMERI06G03280 Oryza meridionalis OMERI06G03280 N
OMERI07G11550 Oryza meridionalis OMERI07G11550 N
ONIVA06G03980 Oryza nivara ONIVA06G03980 N
OPUNC06G02750 Oryza punctata OPUNC06G02750 N
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N
OS06G0145800 Oryza sativa OS06G0145800 N
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N
Sb10g003170 Sorghum bicolor Sb10g003170 N
Si006951m.g Setaria italica Si006951m.g N