Pavir.J27368 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.J27368 T181858_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J27368.1.p FAR1 102 186
Pavir.J27368.2.p FAR1 102 186
Pavir.J27368.3.p FAR1 102 186
Pavir.J27368.4.p FAR1 102 186

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.000
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.000
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.000
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.000
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.000
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.000
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.000
MDP0000669451 Malus domestica MDP0000669451 I 0.000
Pm014329 Prunus mume Pm014329 I 0.000
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.000
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.000
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.000
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.000
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.000
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.000
29692.m000540 Ricinus communis 29692.m000540 N 0.000
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.000
mgf008289m Mimulus guttatus mgf008289m N 0.000
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.000
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.000
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.000
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.000
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.000
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.000
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.000
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.000
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.000
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.000
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.000
SLR1 Oryza indica BGIOSGA013420 N 0.000
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.000
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.000
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.000
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.000
OB03G38380 Oryza brachyantha OB03G38380 N 0.000
OBART03G31370 Oryza barthii OBART03G31370 N 0.000
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.000
OLONG_002563 Oryza longistaminata OLONG_002563 N 0.000
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.000
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.000
TRIUR3_18790 Triticum urartu TRIUR3_18790 N 0.000
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.000
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.000
SLR1 Oryza sativa OS03G0707600 N 0.000
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.000
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.000
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.000
Si039400m.g Setaria italica Si039400m.g N 0.000
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.000
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.000
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.000