ENSSTOG00000004416 (Ictidomys tridecemlineatus)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSSTOG00000004416 T187091_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXP1
M00836_2.00 		Homo sapiens
NRTMAACANN
NNTGTTKAYN		 PBM
Gabut et al.(2011)
pEX0123 		0.764 0.790
FOXP1
M00837_2.00 		Homo sapiens
DGTAAACAA
TTGTTTACH		 PBM
Gabut et al.(2011)
pEX0124 		0.764 0.790
FOXP1
M01976_2.00 		Homo sapiens
RTAAACAA
TTGTTTAY		 PBM
Weirauch et al.(2014)
pTH5656 		0.764 0.790
Foxp1
M00793_2.00 		Mus musculus
NRTMAAYAN
NTRTTKAYN		 PBM
Weirauch et al.(2013)
pTH3855 		0.764 0.790
FOXP1
M04811_2.00 		Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX 		0.764 0.790
FOXP1
M08115_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0481.2 		0.764 0.790
FOXP1
M09086_2.00 		Homo sapiens
RKAAACAVM
KBTGTTTMY		 Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A 		0.764 0.790
FOXP1
M09541_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006 		0.764 0.790
FOXP1
M10536_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXP1_01 		0.764 0.790
FOXP1
M04812_2.00 		Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX 		0.764 0.790
Foxp2
M00792_2.00 		Mus musculus
RTAAACAD
HTGTTTAY		 PBM
Weirauch et al.(2013)
pTH1288 		0.727 0.741
FOXP2
M05866_2.00 		Homo sapiens
RTAAAYAWNN
NNWTRTTTAY		 SMiLE-seq
Isakova et al.(2017)
FOXP2 		0.727 0.741
FOXP2
M08116_2.00 		Homo sapiens
NDGTAAACAVN
NBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0593.1 		0.727 0.741
FOXP2
M09089_2.00 		Homo sapiens
DGTAAACAV
BTGTTTACH		 Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C 		0.727 0.741
Foxp2
M09101_2.00 		Mus musculus
NGTAAACAN
NTGTTTACN		 Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A 		0.727 0.741
FoxP
M03753_2.00 		Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT		 SELEX
Nitta et al.(2015)
CG16899_1 		0.705 0.630
FoxP
M06201_2.00 		Drosophila melanogaster
VRTAAACAA
TTGTTTAYB		 B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735 		0.705 0.630
FoxP
M06202_2.00 		Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB		 B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905 		0.705 0.630
FoxP
M06203_2.00 		Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN		 B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905 		0.705 0.630
Foxj3
M00160_2.00 		Mus musculus
NRTAAACAHN
NDTGTTTAYN		 PBM
Badis et al.(2009)
Foxj3_0982 		0.676 0.444
Foxj3
M01981_2.00 		Mus musculus
VNHHAYANN
NNTRTDDNB		 PBM
Weirauch et al.(2014)
pTH6591 		0.676 0.444
Foxj3
M03055_2.00 		Mus musculus
ACGGACACAAT
ATTGTGTCCGT		 SELEX
Jolma et al.(2013)
Foxj3_1 		0.676 0.444
Foxj3
M03056_2.00 		Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
Foxj3_2 		0.676 0.444
Foxj3
M03057_2.00 		Mus musculus
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_3 		0.676 0.444
Foxj3
M03058_2.00 		Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_4 		0.676 0.444
Foxj3
M09102_2.00 		Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A 		0.676 0.444
FOXJ3
M03046_2.00 		Homo sapiens
RTAAAVAA
TTBTTTAY		 SELEX
Jolma et al.(2013)
FOXJ3_1 		0.675 0.444
FOXJ3
M03047_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_2 		0.675 0.444
FOXJ3
M03048_2.00 		Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_3 		0.675 0.444
FOXJ3
M02736_2.00 		Homo sapiens
AAACAATAAACA
TGTTTATTGTTT		 SELEX
Jolma et al.(2010)
FOXJ3_dimer 		0.675 0.444
FOXJ3
M02737_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2010)
FOXJ3_monomer 		0.675 0.444
FOXJ3
M04859_2.00 		Homo sapiens
DYGTMAACAH
DTGTTKACRH		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX 		0.675 0.444
FOXJ3
M09098_2.00 		Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A 		0.675 0.444
FOXJ3
M04860_2.00 		Homo sapiens
RYGTMAACAH
DTGTTKACRY		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX 		0.675 0.444
NCU06173
M01992_2.00 		Neurospora crassa
RTAAACAH
DTGTTTAY		 PBM
Weirauch et al.(2014)
pTH8896 		0.673 0.395
Foxj2
M00790_2.00 		Mus musculus
VHMAAYANN
NNTRTTKDB		 PBM
Weirauch et al.(2013)
pTH3043 		0.671 0.481
FOXJ2
M03016_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ2_1 		0.671 0.481
FOXJ2
M03017_2.00 		Homo sapiens
RTAAACAH
DTGTTTAY		 SELEX
Jolma et al.(2013)
FOXJ2_2 		0.671 0.481
FOXJ2
M03018_2.00 		Homo sapiens
GTAAACAWMAACA
TGTTKWTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ2_3 		0.671 0.481
FOXJ2
M04809_2.00 		Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN		 SELEX
Yin et al.(2017)
FOXJ2_eDBD_HT-SELEX 		0.671 0.481
FOXJ2
M09084_2.00 		Homo sapiens
WARAYAAAYA
TRTTTRTYTW		 Misc
Kulakovskiy et al.(2013)
FOXJ2_HUMAN.H11MO.0.C 		0.671 0.481
Foxj2
M09100_2.00 		Mus musculus
WARAYAAAYA
TRTTTRTYTW		 Misc
Kulakovskiy et al.(2013)
FOXJ2_MOUSE.H11MO.0.C 		0.671 0.481
FOXJ2
M10527_2.00 		Homo sapiens
HHNHMRAYAAAYANHNND
HNNDNTRTTTRTYKDNDD		 Transfac
Matys et al.(2006)
V$FOXJ2_01 		0.671 0.481
FOXJ2
M10528_2.00 		Homo sapiens
VYMAYAATATTTKN
NMAAATATTRTKRB		 Transfac
Matys et al.(2006)
V$FOXJ2_02 		0.671 0.481
FOXJ2
M04810_2.00 		Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN		 SELEX
Yin et al.(2017)
FOXJ2_eDBD_Methyl-HT-SELEX 		0.671 0.481
SPU_007644
M01987_2.00 		Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN		 PBM
Weirauch et al.(2014)
pTH6497 		0.670 0.444
HCM1
M00044_2.00 		Saccharomyces cerevisiae
NRWHAACAN
NTGTTDWYN		 PBM
Badis et al.(2008)
HCM1_2157 		0.669 0.432
HCM1
M07473_2.00 		Saccharomyces cerevisiae
VWMAACAH
DTGTTKWB		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0317.1 		0.669 0.432
HCM1
M08554_2.00 		Saccharomyces cerevisiae
VWMAACAH
DTGTTKWB		 Misc
DeBoer et al.(2011)
YCR065W_570 		0.669 0.432
FOXK2
M08118_2.00 		Homo sapiens
NNRTAAACANN
NNTGTTTAYNN		 ChIP-seq
Mathelier et al.(2014)
MA1103.1 		0.667 0.432
Foxj2
M01980_2.00 		Mus musculus
RTAAACAN
NTGTTTAY		 PBM
Weirauch et al.(2014)
pTH6638 		0.666 0.457
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000003963 Forkhead 337 420

Links

Other Forkhead family TFs
Other Ictidomys tridecemlineatus TFs

648 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB58 Arabidopsis thaliana AT1G16490 D 0.000
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.000
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.000
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.000
MYB14 Arabidopsis thaliana AT2G31180 I 0.000
BGIOSGA005798 Oryza indica BGIOSGA005798 I 0.000
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.000
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.000
Bo3g025100 Brassica oleracea Bo3g025100 I 0.000
Bo4g176020 Brassica oleracea Bo4g176020 I 0.000
Bo4g176030 Brassica oleracea Bo4g176030 I 0.000
Bo6g081140 Brassica oleracea Bo6g081140 I 0.000
Bo6g122640 Brassica oleracea Bo6g122640 I 0.000
Bo8g105490 Brassica oleracea Bo8g105490 I 0.000
Bra003619 Brassica rapa Bra003619 I 0.000
Bra018267 Brassica rapa Bra018267 I 0.000
Bra021708 Brassica rapa Bra021708 I 0.000
Bra026720 Brassica rapa Bra026720 I 0.000
BRADI3G28830 Brachypodium distachyon BRADI3G28830 I 0.000
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I 0.000
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I 0.000
F775_14744 Aegilops tauschii F775_14744 I 0.000
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.000
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.000
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.000
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.000
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.000
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.000
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.000
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.000
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.000
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.000
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.000
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.000
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.000
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.000
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.000
MLOC_71418 Hordeum vulgare MLOC_71418 I 0.000
MTR_2g067420 Medicago truncatula MTR_2g067420 I 0.000
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.000
OB02G35920 Oryza brachyantha OB02G35920 I 0.000
OB04G30570 Oryza brachyantha OB04G30570 I 0.000
OBART02G28790 Oryza barthii OBART02G28790 I 0.000
OBART04G23680 Oryza barthii OBART04G23680 I 0.000
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I 0.000
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.000
OLONG_022853 Oryza longistaminata OLONG_022853 I 0.000
OMERI02G27850 Oryza meridionalis OMERI02G27850 I 0.000
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.000
ONIVA02G31530 Oryza nivara ONIVA02G31530 I 0.000
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.000
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.000
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.000
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.000
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.000
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I 0.000
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.000
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.000
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.000
OS02G0695200 Oryza sativa OS02G0695200 I 0.000
OS04G0594100 Oryza sativa OS04G0594100 I 0.000
OS10G0478300 Oryza sativa OS10G0478300 I 0.000
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.000
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.000
Sb04g026480 Sorghum bicolor Sb04g026480 I 0.000
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.000
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.000
Si010384m.g Setaria italica Si010384m.g I 0.000
Si010814m.g Setaria italica Si010814m.g I 0.000
TCM_007865 Theobroma cacao TCM_007865 I 0.000
TCM_007868 Theobroma cacao TCM_007868 I 0.000
TCM_020889 Theobroma cacao TCM_020889 I 0.000
TCM_026197 Theobroma cacao TCM_026197 I 0.000
Traes_6AL_C13753B31 Triticum aestivum Traes_6AL_C13753B31 I 0.000
Traes_6DL_8BAAC240D Triticum aestivum Traes_6DL_8BAAC240D I 0.000
TRIUR3_14330 Triticum urartu TRIUR3_14330 I 0.000
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.000
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.000
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.000
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.000
Pm015303 Prunus mume Pm015303 I 0.000
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.000
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.000
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.000
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I 0.000
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.000
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.000
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.000
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I 0.000
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.000
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.000
Carubv10020691m.g Capsella rubella Carubv10020691m.g I 0.000
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.000
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.000
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.000
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.000
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.000
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.000
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.000
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.000
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.000
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.000
gene01997-v1.0-hybrid Fragaria vesca gene01997-v1.0-hybrid I 0.000
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.000
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.000
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.000
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.000
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.000
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.000
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.000
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.000
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.000
Lus10041145.g Linum usitatissimum Lus10041145.g I 0.000
MDP0000155426 Malus domestica MDP0000155426 I 0.000
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.000
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.000
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.000
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.000
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.000
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.000
Thhalv10018933m.g Eutrema salsugineum Thhalv10018933m.g I 0.000
PK03488.1 Cannabis sativa PK03488.1 I 0.000
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.000
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.000
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.000
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.000
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.000
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.000
Pm015302 Prunus mume Pm015302 N 0.000
cassava26895.m1 Manihot esculenta cassava26895.m1 N 0.000
mgf018684m Mimulus guttatus mgf018684m N 0.000
mgf019234m Mimulus guttatus mgf019234m N 0.000
mgf022141m Mimulus guttatus mgf022141m N 0.000
mgf022158m Mimulus guttatus mgf022158m N 0.000
Aquca_030_00245 Aquilegia coerulea Aquca_030_00245 N 0.000
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.000
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.000
Lus10018518.g Linum usitatissimum Lus10018518.g N 0.000
Lus10033737.g Linum usitatissimum Lus10033737.g N 0.000
MDP0000407613 Malus domestica MDP0000407613 N 0.000
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.000
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.000
PK24260.1 Cannabis sativa PK24260.1 N 0.000
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.000