cassava36326.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava36326.valid.m1 T202093_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava36326.valid.m1 GRAS 399 757

Links

Other GRAS family TFs
Other Manihot esculenta TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N 0.936
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.805
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.808
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.805
SCR Vitis vinifera VIT_08s0056g00050 N 0.933
Ca_09530 Cicer arietinum Ca_09530 N 0.916
Cla012346 Citrullus lanatus Cla012346 N 0.903
Pm002956 Prunus mume Pm002956 N 0.930
30073.m002204 Ricinus communis 30073.m002204 N 0.955
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N 0.975
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.900
mgf012242m Mimulus guttatus mgf012242m N 0.894
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.891
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.894
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.894
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.894
TCM_017746 Theobroma cacao TCM_017746 N 0.925
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.908
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.925
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.916
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.866
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.897
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.812
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.811
MDP0000397638 Malus domestica MDP0000397638 N 0.919
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 0.936
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.778
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.944
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.919
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.894
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.916
OBART11G01460 Oryza barthii OBART11G01460 N 0.802
SCR Arabidopsis thaliana AT3G54220 N 0.894
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.814
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.819
Bo8g083500 Brassica oleracea Bo8g083500 N 0.897
Bra007056 Brassica rapa Bra007056 N 0.772
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.894
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.903
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.900
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.785
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.841
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.838
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.938
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.821
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.794
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.914
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.788
OBART12G01190 Oryza barthii OBART12G01190 N 0.719
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.719
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.719
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.791
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.819
SCR1 Oryza sativa OS11G0124300 N 0.814
SCR2 Oryza sativa OS12G0122000 N 0.819
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N 0.889
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N 0.925
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.942
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.933
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.822
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N 0.738
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.903