CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
mgf008315m
(
Mimulus guttatus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
mgf008315m
T202197_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf008315m
GRAS
47
439
LIHLLVTCANHVSQGSFENANIALDQISHLASPNGDTMQRIASYFSEALADRILRTWPGIYKAFRSTKISFLSEEILVRKMFSDFLPFTKVASVIANQAIIEAMEGEKMVHLIDLNAADPTQWRALIQDLRARPEGPPHLRITGIHHRKEVLDHMARILTQEAEKLDLPFQFNPIVCKLENLEFENLRVKTGEALAISSFTQLHTLLAPNNDPRNGSHLQREMLDKDNESGSSSPPLSSSARIDSFISGLWGLSPKIMVVTEQDSDHNGKGLMERLSGALYFYAALFDCLESSLPRESLERLKMEKMVLGEEIKNIIACEGVERKERHEKLEKWSQRFEFCGFANVPLSYYAMLQAKRLMQGFNCEGYNIKDENGCVVICWQDRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Mimulus guttatus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm012190
Prunus mume
Pm012190
N
0.725
chr2.CM0018.90.nc
Lotus japonicus
chr2.CM0018.90.nc
N
0.703
SapurV1A.0415s0050
Salix purpurea
SapurV1A.0415s0050
N
0.707
orange1.1g014413m.g
Citrus sinensis
orange1.1g014413m.g
N
0.717
Gorai.006G125700
Gossypium raimondii
Gorai.006G125700
N
0.736
evm.TU.supercontig_84.12
Carica papaya
evm.TU.supercontig_84.12
N
0.722
Ciclev10015219m.g
Citrus clementina
Ciclev10015219m.g
N
0.727
Aquca_014_00674
Aquilegia coerulea
Aquca_014_00674
N
0.703
mgf022906m
Mimulus guttatus
mgf022906m
N
0.798
Cucsa.055340
Cucumis sativus
Cucsa.055340
N
0.703
cassava31043.valid.m1
Manihot esculenta
cassava31043.valid.m1
N
0.703
cassava13860.valid.m1
Manihot esculenta
cassava13860.valid.m1
N
0.703
30024.m001746
Ricinus communis
30024.m001746
N
0.710
PGSC0003DMG400004649
Solanum tuberosum
PGSC0003DMG400004649
N
0.771
Cla006433
Citrullus lanatus
Cla006433
N
0.703
Ca_27441
Cicer arietinum
Ca_27441
N
0.700
Ca_11133
Cicer arietinum
Ca_11133
N
0.704
VIT_13s0019g01220
Vitis vinifera
VIT_13s0019g01220
N
0.708
SCL3
Vitis vinifera
VIT_06s0009g02390
N
0.736
TCM_042392
Theobroma cacao
TCM_042392
N
0.703
TCM_040833
Theobroma cacao
TCM_040833
N
0.741
Solyc12g099900.1
Solanum lycopersicum
Solyc12g099900.1
N
0.768
Solyc01g008910.2
Solanum lycopersicum
Solyc01g008910.2
N
0.741
PRUPE_ppa005243mg
Prunus persica
PRUPE_ppa005243mg
N
0.722
SCL3
Populus trichocarpa
POPTR_0009s05330
N
0.721
PGSC0003DMG400022709
Solanum tuberosum
PGSC0003DMG400022709
N
0.749