Ciclev10011085m.g (Citrus clementina)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Ciclev10011085m.g T202387_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10011085m GRAS 445 803

Links

Other GRAS family TFs
Other Citrus clementina TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.905
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.805
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.808
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.808
SCR Vitis vinifera VIT_08s0056g00050 N 0.933
Ca_09530 Cicer arietinum Ca_09530 N 0.903
Cla012346 Citrullus lanatus Cla012346 N 0.905
Pm002956 Prunus mume Pm002956 N 0.930
30073.m002204 Ricinus communis 30073.m002204 N 0.944
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N 0.944
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N 0.936
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.903
mgf012242m Mimulus guttatus mgf012242m N 0.900
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.886
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.905
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.905
TCM_017746 Theobroma cacao TCM_017746 N 0.930
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.897
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.942
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.925
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.875
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.900
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.820
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.819
MDP0000397638 Malus domestica MDP0000397638 N 0.919
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 1.000
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.776
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.947
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.914
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.905
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.911
OBART11G01460 Oryza barthii OBART11G01460 N 0.799
SCR Arabidopsis thaliana AT3G54220 N 0.905
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.812
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.816
Bo8g083500 Brassica oleracea Bo8g083500 N 0.908
Bra007056 Brassica rapa Bra007056 N 0.777
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.905
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.903
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.900
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.787
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.822
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.838
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.875
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.818
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.797
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.900
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.811
OBART12G01190 Oryza barthii OBART12G01190 N 0.716
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.716
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.716
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.788
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.816
SCR1 Oryza sativa OS11G0124300 N 0.812
SCR2 Oryza sativa OS12G0122000 N 0.816
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N 0.897
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N 0.928
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.947
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.933
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.819
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N 0.721
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.905