Lus10017688.g (Linum usitatissimum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Lus10017688.g T228878_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10017688 Homeodomain 35 91

Links

Other Homeodomain family TFs
Other Linum usitatissimum TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RLT1 Arabidopsis thaliana AT1G28420 D 0.000
AMTR_s00058p00137050 Amborella trichopoda AMTR_s00058p00137050 I 0.668
RLT2 Arabidopsis thaliana AT5G44180 I 0.739
BGIOSGA004179 Oryza indica BGIOSGA004179 I 0.000
BGIOSGA022450 Oryza indica BGIOSGA022450 I 0.000
Bo3g143570 Brassica oleracea Bo3g143570 I 0.619
Bo5g055970 Brassica oleracea Bo5g055970 I 0.000
Bo7g067190 Brassica oleracea Bo7g067190 I 0.766
Bra010869 Brassica rapa Bra010869 I 0.619
Bra032908 Brassica rapa Bra032908 I 0.000
Bra033725 Brassica rapa Bra033725 I 0.764
BRADI2G16647 Brachypodium distachyon BRADI2G16647 I 0.000
BRADI2G46230 Brachypodium distachyon BRADI2G46230 I 0.000
F775_01844 Aegilops tauschii F775_01844 I 0.000
HB-1 Arabidopsis lyrata fgenesh2_kg.1__3015__AT1G28420.1 I 0.000
fgenesh2_kg.8__392__AT5G44180.1 Arabidopsis lyrata fgenesh2_kg.8__392__AT5G44180.1 I 0.754
GLYMA06G44290 Glycine max GLYMA06G44290 I 0.732
GLYMA07G32180 Glycine max GLYMA07G32180 I 0.000
GLYMA13G24370 Glycine max GLYMA13G24370 I 0.000
GLYMA13G30860 Glycine max GLYMA13G30860 I 0.000
GRMZM2G060541 Zea mays GRMZM2G060541 I 0.000
GRMZM2G122750 Zea mays GRMZM2G122750 I 0.000
GRMZM2G125294 Zea mays GRMZM2G125294 I 0.000
GRMZM2G159357 Zea mays GRMZM2G159357 I 0.000
GSMUA_Achr6G26980_001 Musa acuminata GSMUA_Achr6G26980_001 I 0.675
LPERR01G22320 Leersia perrieri LPERR01G22320 I 0.000
LPERR05G21380 Leersia perrieri LPERR05G21380 I 0.000
MTR_2g014490 Medicago truncatula MTR_2g014490 I 0.000
MTR_4g088375 Medicago truncatula MTR_4g088375 I 0.000
OB01G35240 Oryza brachyantha OB01G35240 I 0.000
OBART05G25730 Oryza barthii OBART05G25730 I 0.000
OGLUM01G29920 Oryza glumaepatula OGLUM01G29920 I 0.000
OGLUM05G27370 Oryza glumaepatula OGLUM05G27370 I 0.000
OMERI01G23740 Oryza meridionalis OMERI01G23740 I 0.000
ONIVA01G29520 Oryza nivara ONIVA01G29520 I 0.000
ONIVA05G27640 Oryza nivara ONIVA05G27640 I 0.000
OPUNC01G25990 Oryza punctata OPUNC01G25990 I 0.000
ORGLA05G0222200 Oryza glaberrima ORGLA05G0222200 I 0.000
ORUFI01G29060 Oryza rufipogon ORUFI01G29060 I 0.000
ORUFI05G27630 Oryza rufipogon ORUFI05G27630 I 0.000
OS01G0672201 Oryza sativa OS01G0672201 I 0.000
POPTR_0007s01330 Populus trichocarpa POPTR_0007s01330 I 0.773
POPTR_0011s05660 Populus trichocarpa POPTR_0011s05660 I 0.000
POPTR_0017s04760 Populus trichocarpa POPTR_0017s04760 I 0.772
PRUPE_ppa000115mg Prunus persica PRUPE_ppa000115mg I 0.000
Sb03g030770 Sorghum bicolor Sb03g030770 I 0.000
Sb03g030782 Sorghum bicolor Sb03g030782 I 0.000
SELMODRAFT_422900 Selaginella moellendorffii SELMODRAFT_422900 I 0.669
SELMODRAFT_428998 Selaginella moellendorffii SELMODRAFT_428998 I 0.669
SELMODRAFT_447019 Selaginella moellendorffii SELMODRAFT_447019 I 0.690
SELMODRAFT_447089 Selaginella moellendorffii SELMODRAFT_447089 I 0.690
Si004333m.g Setaria italica Si004333m.g I 0.000
Si020949m.g Setaria italica Si020949m.g I 0.000
Solyc02g077660.2 Solanum lycopersicum Solyc02g077660.2 I 0.000
Solyc07g053610.2 Solanum lycopersicum Solyc07g053610.2 I 0.728
TCM_008214 Theobroma cacao TCM_008214 I 0.735
TCM_029805 Theobroma cacao TCM_029805 I 0.000
VIT_10s0003g00290 Vitis vinifera VIT_10s0003g00290 I 0.000
VIT_12s0028g03080 Vitis vinifera VIT_12s0028g03080 I 0.760
Ca_00337 Cicer arietinum Ca_00337 I 0.000
Ca_06343 Cicer arietinum Ca_06343 I 0.000
Ca_11272 Cicer arietinum Ca_11272 I 0.722
Cla009803 Citrullus lanatus Cla009803 I 0.000
Pm010098 Prunus mume Pm010098 I 0.000
29983.m003128 Ricinus communis 29983.m003128 I 0.772
30190.m011307 Ricinus communis 30190.m011307 I 0.000
cassava1593.valid.m1 Manihot esculenta cassava1593.valid.m1 I 0.000
cassava43653.valid.m1 Manihot esculenta cassava43653.valid.m1 I 0.772
Cucsa.046480 Cucumis sativus Cucsa.046480 I 0.000
fgenesh1_pg.scaffold_15000027 Physcomitrella patens fgenesh1_pg.scaffold_15000027 I 0.000
mgf006635m Mimulus guttatus mgf006635m I 0.000
mgf006858m Mimulus guttatus mgf006858m I 0.000
Aquca_051_00028 Aquilegia coerulea Aquca_051_00028 I 0.728
Bostr.15697s0165 Boechera stricta Bostr.15697s0165 I 0.000
Bostr.3148s0041 Boechera stricta Bostr.3148s0041 I 0.754
Cagra.0381s0009 Capsella grandiflora Cagra.0381s0009 I 0.755
Cagra.1822s0015 Capsella grandiflora Cagra.1822s0015 I 0.000
Carubv10025737m.g Capsella rubella Carubv10025737m.g I 0.755
Ciclev10014022m.g Citrus clementina Ciclev10014022m.g I 0.735
Ciclev10014023m.g Citrus clementina Ciclev10014023m.g I 0.000
Eucgr.D00596 Eucalyptus grandis Eucgr.D00596 I 0.000
Eucgr.K01058 Eucalyptus grandis Eucgr.K01058 I 0.768
evm.TU.supercontig_27.2 Carica papaya evm.TU.supercontig_27.2 I 0.000
evm.TU.supercontig_83.97 Carica papaya evm.TU.supercontig_83.97 I 0.000
gene17756-v1.0-hybrid Fragaria vesca gene17756-v1.0-hybrid I 0.686
gene29752-v1.0-hybrid Fragaria vesca gene29752-v1.0-hybrid I 0.000
Gorai.008G155100 Gossypium raimondii Gorai.008G155100 I 0.735
Gorai.010G243500 Gossypium raimondii Gorai.010G243500 I 0.000
Gorai.010G256900 Gossypium raimondii Gorai.010G256900 I 0.000
Lus10013979.g Linum usitatissimum Lus10013979.g I 0.000
Lus10015325.g Linum usitatissimum Lus10015325.g I 0.000
Lus10015400.g Linum usitatissimum Lus10015400.g I 0.000
Lus10018634.g Linum usitatissimum Lus10018634.g I 0.736
Lus10025454.g Linum usitatissimum Lus10025454.g I 0.000
Lus10039870.g Linum usitatissimum Lus10039870.g I 0.736
MDP0000192108 Malus domestica MDP0000192108 I 0.000
MDP0000288192 Malus domestica MDP0000288192 I 0.000
orange1.1g000279m.g Citrus sinensis orange1.1g000279m.g I 0.000
orange1.1g004454m.g Citrus sinensis orange1.1g004454m.g I 0.735
Pavir.Ca00923 Panicum virgatum Pavir.Ca00923 I 0.000
Pavir.J20612 Panicum virgatum Pavir.J20612 I 0.000
SapurV1A.0012s0660 Salix purpurea SapurV1A.0012s0660 I 0.000
SapurV1A.0032s0540 Salix purpurea SapurV1A.0032s0540 I 0.000
SapurV1A.0118s0310 Salix purpurea SapurV1A.0118s0310 I 0.773
SapurV1A.0693s0030 Salix purpurea SapurV1A.0693s0030 I 0.772
SapurV1A.3333s0010 Salix purpurea SapurV1A.3333s0010 I 0.773
SapurV1A.3547s0010 Salix purpurea SapurV1A.3547s0010 I 0.773
Thhalv10003131m.g Eutrema salsugineum Thhalv10003131m.g I 0.754
Thhalv10006543m.g Eutrema salsugineum Thhalv10006543m.g I 0.000
PK06068.1 Cannabis sativa PK06068.1 I 0.723
PK13272.1 Cannabis sativa PK13272.1 I 0.000