Bo7g067190 (Brassica oleracea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Bo7g067190 T204966_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.668 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g067190.1 Homeodomain 22 78

Links

Other Homeodomain family TFs
Other Brassica oleracea TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra033725 Brassica rapa Bra033725 I 0.865
Eucgr.K01058 Eucalyptus grandis Eucgr.K01058 I 0.859
POPTR_0017s04760 Populus trichocarpa POPTR_0017s04760 I 0.859
cassava43653.valid.m1 Manihot esculenta cassava43653.valid.m1 I 0.855
29983.m003128 Ricinus communis 29983.m003128 I 0.855
SapurV1A.0118s0310 Salix purpurea SapurV1A.0118s0310 I 0.855
POPTR_0007s01330 Populus trichocarpa POPTR_0007s01330 I 0.855
SapurV1A.0693s0030 Salix purpurea SapurV1A.0693s0030 I 0.855
SapurV1A.3333s0010 Salix purpurea SapurV1A.3333s0010 I 0.855
SapurV1A.3547s0010 Salix purpurea SapurV1A.3547s0010 I 0.855
Bostr.3148s0041 Boechera stricta Bostr.3148s0041 I 0.854
fgenesh2_kg.8__392__AT5G44180.1 Arabidopsis lyrata fgenesh2_kg.8__392__AT5G44180.1 I 0.854
Cagra.0381s0009 Capsella grandiflora Cagra.0381s0009 I 0.854
Carubv10025737m.g Capsella rubella Carubv10025737m.g I 0.854
Thhalv10003131m.g Eutrema salsugineum Thhalv10003131m.g I 0.854
VIT_12s0028g03080 Vitis vinifera VIT_12s0028g03080 I 0.843
RLT2 Arabidopsis thaliana AT5G44180 I 0.838
Lus10039870.g Linum usitatissimum Lus10039870.g I 0.827
Lus10018634.g Linum usitatissimum Lus10018634.g I 0.827
GLYMA06G44290 Glycine max GLYMA06G44290 I 0.825
Ciclev10014022m.g Citrus clementina Ciclev10014022m.g I 0.822
Gorai.008G155100 Gossypium raimondii Gorai.008G155100 I 0.822
orange1.1g004454m.g Citrus sinensis orange1.1g004454m.g I 0.822
TCM_008214 Theobroma cacao TCM_008214 I 0.822
Ca_11272 Cicer arietinum Ca_11272 I 0.818
PK06068.1 Cannabis sativa PK06068.1 I 0.815
Solyc07g053610.2 Solanum lycopersicum Solyc07g053610.2 I 0.810
Aquca_051_00028 Aquilegia coerulea Aquca_051_00028 I 0.810
SELMODRAFT_447019 Selaginella moellendorffii SELMODRAFT_447019 I 0.775
gene17756-v1.0-hybrid Fragaria vesca gene17756-v1.0-hybrid I 0.775
SELMODRAFT_447089 Selaginella moellendorffii SELMODRAFT_447089 I 0.775
Lus10017688.g Linum usitatissimum Lus10017688.g N 0.766
GSMUA_Achr6G26980_001 Musa acuminata GSMUA_Achr6G26980_001 I 0.758
AMTR_s00058p00137050 Amborella trichopoda AMTR_s00058p00137050 I 0.757
SELMODRAFT_422900 Selaginella moellendorffii SELMODRAFT_422900 I 0.755
SELMODRAFT_428998 Selaginella moellendorffii SELMODRAFT_428998 I 0.755
Bo3g143570 Brassica oleracea Bo3g143570 I 0.699
Bra010869 Brassica rapa Bra010869 I 0.699
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.690
evm.TU.supercontig_83.97 Carica papaya evm.TU.supercontig_83.97 I 0.689
MTR_4g078860 Medicago truncatula MTR_4g078860 N 0.684
PDK_20s1551001g001 Phoenix dactylifera PDK_20s1551001g001 I 0.682
ORGLA05G0222200 Oryza glaberrima ORGLA05G0222200 I 0.673
ORUFI05G27630 Oryza rufipogon ORUFI05G27630 I 0.673
OBART05G25730 Oryza barthii OBART05G25730 I 0.673
OGLUM05G27370 Oryza glumaepatula OGLUM05G27370 I 0.673
LPERR05G21380 Leersia perrieri LPERR05G21380 I 0.673
BGIOSGA022450 Oryza indica BGIOSGA022450 I 0.673
ONIVA05G27640 Oryza nivara ONIVA05G27640 I 0.673
SapurV1A.0012s0660 Salix purpurea SapurV1A.0012s0660 I 0.672
VIT_10s0003g00290 Vitis vinifera VIT_10s0003g00290 I 0.671
Cagra.1822s0015 Capsella grandiflora Cagra.1822s0015 I 0.670
PDK_20s1402391g002 Phoenix dactylifera PDK_20s1402391g002 I 0.670
Bostr.15697s0165 Boechera stricta Bostr.15697s0165 I 0.670
MDP0000207866 Malus domestica MDP0000207866 I 0.669
Cla008712 Citrullus lanatus Cla008712 I 0.669
HB-1 Arabidopsis lyrata fgenesh2_kg.1__3015__AT1G28420.1 I 0.668
MTR_2g014490 Medicago truncatula MTR_2g014490 I 0.668
MDP0000288192 Malus domestica MDP0000288192 I 0.668
cassava1593.valid.m1 Manihot esculenta cassava1593.valid.m1 I 0.668
Cla009803 Citrullus lanatus Cla009803 I 0.668
Pm010098 Prunus mume Pm010098 I 0.668
Lus10015400.g Linum usitatissimum Lus10015400.g I 0.668
Ciclev10014023m.g Citrus clementina Ciclev10014023m.g I 0.668
gene29752-v1.0-hybrid Fragaria vesca gene29752-v1.0-hybrid I 0.668
Lus10013979.g Linum usitatissimum Lus10013979.g I 0.668
MTR_4g088375 Medicago truncatula MTR_4g088375 I 0.668
evm.TU.supercontig_27.2 Carica papaya evm.TU.supercontig_27.2 I 0.668
PK13272.1 Cannabis sativa PK13272.1 I 0.668
RLT1 Arabidopsis thaliana AT1G28420 D 0.668
Cucsa.046480 Cucumis sativus Cucsa.046480 I 0.668
Thhalv10006543m.g Eutrema salsugineum Thhalv10006543m.g I 0.668
GLYMA13G24370 Glycine max GLYMA13G24370 I 0.668
PRUPE_ppa000115mg Prunus persica PRUPE_ppa000115mg I 0.668
orange1.1g000279m.g Citrus sinensis orange1.1g000279m.g I 0.668
MDP0000192108 Malus domestica MDP0000192108 I 0.668
GLYMA13G30860 Glycine max GLYMA13G30860 I 0.668
Ca_00337 Cicer arietinum Ca_00337 I 0.668
Ca_06343 Cicer arietinum Ca_06343 I 0.668
GLYMA07G32180 Glycine max GLYMA07G32180 I 0.668
Bra032908 Brassica rapa Bra032908 I 0.667
Bo5g055970 Brassica oleracea Bo5g055970 I 0.667
SapurV1A.0032s0540 Salix purpurea SapurV1A.0032s0540 I 0.667
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.665
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.659
POPTR_0011s05660 Populus trichocarpa POPTR_0011s05660 I 0.657
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.657
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.657
Ca_21400 Cicer arietinum Ca_21400 I 0.657
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.657
MTR_5g089870 Medicago truncatula MTR_5g089870 N 0.653
Gorai.010G243500 Gossypium raimondii Gorai.010G243500 I 0.652
TCM_029805 Theobroma cacao TCM_029805 I 0.652
Gorai.010G256900 Gossypium raimondii Gorai.010G256900 I 0.652
GRMZM2G125294 Zea mays GRMZM2G125294 I 0.650
GRMZM2G122750 Zea mays GRMZM2G122750 I 0.650
Pavir.J20612 Panicum virgatum Pavir.J20612 I 0.648
Pavir.Ca00923 Panicum virgatum Pavir.Ca00923 I 0.648
Si020949m.g Setaria italica Si020949m.g I 0.648
Eucgr.D00596 Eucalyptus grandis Eucgr.D00596 I 0.646
Solyc02g077660.2 Solanum lycopersicum Solyc02g077660.2 I 0.646
Lus10015325.g Linum usitatissimum Lus10015325.g I 0.644
Lus10025454.g Linum usitatissimum Lus10025454.g I 0.644
fgenesh1_pg.scaffold_15000027 Physcomitrella patens fgenesh1_pg.scaffold_15000027 I 0.642
BRADI2G16647 Brachypodium distachyon BRADI2G16647 I 0.638
mgf006858m Mimulus guttatus mgf006858m I 0.636
Sb03g030770 Sorghum bicolor Sb03g030770 I 0.635
Sb03g030782 Sorghum bicolor Sb03g030782 I 0.635
BRADI2G46230 Brachypodium distachyon BRADI2G46230 I 0.633
F775_01844 Aegilops tauschii F775_01844 I 0.633
MLOC_62571 Hordeum vulgare MLOC_62571 I 0.633
BGIOSGA004179 Oryza indica BGIOSGA004179 I 0.630
GRMZM2G060541 Zea mays GRMZM2G060541 I 0.630
OMERI01G23740 Oryza meridionalis OMERI01G23740 I 0.630
ORUFI01G29060 Oryza rufipogon ORUFI01G29060 I 0.630
OS01G0672201 Oryza sativa OS01G0672201 I 0.630
Si004333m.g Setaria italica Si004333m.g I 0.630
OPUNC01G25990 Oryza punctata OPUNC01G25990 I 0.630
ONIVA01G29520 Oryza nivara ONIVA01G29520 I 0.630
LPERR01G22320 Leersia perrieri LPERR01G22320 I 0.630
OB01G35240 Oryza brachyantha OB01G35240 I 0.630
OGLUM01G29920 Oryza glumaepatula OGLUM01G29920 I 0.630
GRMZM2G159357 Zea mays GRMZM2G159357 I 0.630
mgf006635m Mimulus guttatus mgf006635m I 0.620
30190.m011307 Ricinus communis 30190.m011307 I 0.616
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.606
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.606
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I 0.606
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.606
Bo9g006450 Brassica oleracea Bo9g006450 I 0.602
Bra034196 Brassica rapa Bra034196 I 0.602