PDK_20s1402391g002 (Phoenix dactylifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 PDK_20s1402391g002 T231013_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.605 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1402391g002 Homeodomain 18 74

Links

Other Homeodomain family TFs
Other Phoenix dactylifera TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDK_20s1551001g001 Phoenix dactylifera PDK_20s1551001g001 I 0.822
Bo9g006450 Brassica oleracea Bo9g006450 I 0.749
Bra034196 Brassica rapa Bra034196 I 0.749
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.749
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.749
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.743
MTR_5g089870 Medicago truncatula MTR_5g089870 N 0.728
Aquca_051_00028 Aquilegia coerulea Aquca_051_00028 I 0.704
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I 0.703
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.698
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.698
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.698
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.698
Cla008712 Citrullus lanatus Cla008712 I 0.698
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.697
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.697
MDP0000207866 Malus domestica MDP0000207866 I 0.697
Ca_21400 Cicer arietinum Ca_21400 I 0.692
SELMODRAFT_422900 Selaginella moellendorffii SELMODRAFT_422900 I 0.684
SELMODRAFT_428998 Selaginella moellendorffii SELMODRAFT_428998 I 0.684
POPTR_0007s01330 Populus trichocarpa POPTR_0007s01330 I 0.672
POPTR_0017s04760 Populus trichocarpa POPTR_0017s04760 I 0.672
Solyc07g053610.2 Solanum lycopersicum Solyc07g053610.2 I 0.672
TCM_008214 Theobroma cacao TCM_008214 I 0.672
VIT_12s0028g03080 Vitis vinifera VIT_12s0028g03080 I 0.672
Ca_11272 Cicer arietinum Ca_11272 I 0.672
29983.m003128 Ricinus communis 29983.m003128 I 0.672
cassava43653.valid.m1 Manihot esculenta cassava43653.valid.m1 I 0.672
Ciclev10014022m.g Citrus clementina Ciclev10014022m.g I 0.672
Eucgr.K01058 Eucalyptus grandis Eucgr.K01058 I 0.672
Gorai.008G155100 Gossypium raimondii Gorai.008G155100 I 0.672
orange1.1g004454m.g Citrus sinensis orange1.1g004454m.g I 0.672
SapurV1A.0118s0310 Salix purpurea SapurV1A.0118s0310 I 0.672
SapurV1A.0693s0030 Salix purpurea SapurV1A.0693s0030 I 0.672
SapurV1A.3333s0010 Salix purpurea SapurV1A.3333s0010 I 0.672
SapurV1A.3547s0010 Salix purpurea SapurV1A.3547s0010 I 0.672
PK06068.1 Cannabis sativa PK06068.1 I 0.672
Bo7g067190 Brassica oleracea Bo7g067190 I 0.670
fgenesh2_kg.8__392__AT5G44180.1 Arabidopsis lyrata fgenesh2_kg.8__392__AT5G44180.1 I 0.670
GSMUA_Achr6G26980_001 Musa acuminata GSMUA_Achr6G26980_001 I 0.670
Bostr.3148s0041 Boechera stricta Bostr.3148s0041 I 0.670
Cagra.0381s0009 Capsella grandiflora Cagra.0381s0009 I 0.670
Carubv10025737m.g Capsella rubella Carubv10025737m.g I 0.670
Thhalv10003131m.g Eutrema salsugineum Thhalv10003131m.g I 0.670
Bra033725 Brassica rapa Bra033725 I 0.668
RLT2 Arabidopsis thaliana AT5G44180 I 0.654
SELMODRAFT_447019 Selaginella moellendorffii SELMODRAFT_447019 I 0.651
SELMODRAFT_447089 Selaginella moellendorffii SELMODRAFT_447089 I 0.651
GLYMA06G44290 Glycine max GLYMA06G44290 I 0.648
Lus10018634.g Linum usitatissimum Lus10018634.g I 0.640
Lus10039870.g Linum usitatissimum Lus10039870.g I 0.640
gene17756-v1.0-hybrid Fragaria vesca gene17756-v1.0-hybrid I 0.638
VIT_06s0009g03530 Vitis vinifera VIT_06s0009g03530 I 0.633
mgf007720m Mimulus guttatus mgf007720m I 0.631
AMTR_s00058p00137050 Amborella trichopoda AMTR_s00058p00137050 I 0.616
Bostr.2983s0116 Boechera stricta Bostr.2983s0116 I 0.611
PK25011.1 Cannabis sativa PK25011.1 D 0.605